Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS27900

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,211,479	+		PFLU_RS27895	0.28	-0.9
6,211,480	-		PFLU_RS27895	0.28	+0.8
6,211,480	-		PFLU_RS27895	0.28	+0.8
6,211,604	-		PFLU_RS27895	0.41	+0.5
6,211,647	+		PFLU_RS27895	0.46	-0.4
6,211,648	-		PFLU_RS27895	0.46	-0.3
6,211,788	+		PFLU_RS27895	0.60	-0.7
6,211,788	+		PFLU_RS27895	0.60	+0.5
6,211,789	-		PFLU_RS27895	0.60	+1.0
6,211,789	-		PFLU_RS27895	0.60	+0.8
6,211,821	+		PFLU_RS27895	0.63	+0.6
6,211,821	+		PFLU_RS27895	0.63	+1.3
6,211,821	+		PFLU_RS27895	0.63	-0.3
6,211,821	+		PFLU_RS27895	0.63	-0.0
6,211,821	+		PFLU_RS27895	0.63	-0.0
6,211,822	-		PFLU_RS27895	0.63	+0.7
6,211,822	-		PFLU_RS27895	0.63	+0.4
6,211,822	-		PFLU_RS27895	0.63	-0.5
6,211,822	-		PFLU_RS27895	0.63	+0.9
6,212,192	+				+0.5
6,212,241	+				+0.1
6,212,242	-				-0.4
6,212,242	-				+0.3
6,212,242	-				+1.2
6,212,242	-				-0.1
6,212,319	+				-0.3
6,212,353	+				-0.3
6,212,353	+				-2.0
6,212,353	+				-0.3
6,212,353	+				-0.0
6,212,353	+				-0.4
6,212,354	-				+0.0
6,212,386	-				-0.2
6,212,519	+		PFLU_RS27900	0.30	+1.3
6,212,519	+		PFLU_RS27900	0.30	+0.0
6,212,519	+		PFLU_RS27900	0.30	+0.1
6,212,520	-		PFLU_RS27900	0.30	+0.5
6,212,520	-		PFLU_RS27900	0.30	+0.5
6,212,520	-		PFLU_RS27900	0.30	-0.1
6,212,520	-		PFLU_RS27900	0.30	-0.7
6,212,520	-		PFLU_RS27900	0.30	-0.5
6,212,520	-		PFLU_RS27900	0.30	+0.4
6,212,520	-		PFLU_RS27900	0.30	-0.1
6,212,554	+		PFLU_RS27900	0.39	+0.6
6,212,554	+		PFLU_RS27900	0.39	-1.1
6,212,555	-		PFLU_RS27900	0.39	-0.2
6,212,558	+		PFLU_RS27900	0.40	-0.6
6,212,558	+		PFLU_RS27900	0.40	+0.2
6,212,558	+		PFLU_RS27900	0.40	-0.2
6,212,558	+		PFLU_RS27900	0.40	+0.7
6,212,559	-		PFLU_RS27900	0.40	-1.0
6,212,559	-		PFLU_RS27900	0.40	-0.0
6,212,559	-		PFLU_RS27900	0.40	+0.4
6,212,559	-		PFLU_RS27900	0.40	+0.4
6,212,591	+		PFLU_RS27900	0.48	-1.5
6,212,591	+		PFLU_RS27900	0.48	+0.7
6,212,591	+		PFLU_RS27900	0.48	-1.0
6,212,591	+		PFLU_RS27900	0.48	+1.0
6,212,592	-		PFLU_RS27900	0.48	-0.9
6,212,592	-		PFLU_RS27900	0.48	-0.4
6,212,592	-		PFLU_RS27900	0.48	+0.4
6,212,592	-		PFLU_RS27900	0.48	-1.0
6,212,624	-		PFLU_RS27900	0.56	+0.5
6,212,689	+		PFLU_RS27900	0.72	-0.6
6,212,690	-		PFLU_RS27900	0.72	+2.2
6,212,690	-		PFLU_RS27900	0.72	-1.9
6,212,720	+		PFLU_RS27900	0.80	-0.7
6,212,720	+		PFLU_RS27900	0.80	+0.1
6,212,720	+		PFLU_RS27900	0.80	-1.0
6,212,720	+		PFLU_RS27900	0.80	+0.1
6,212,720	+		PFLU_RS27900	0.80	+0.1
6,212,720	+		PFLU_RS27900	0.80	-0.1
6,212,721	-		PFLU_RS27900	0.80	-1.1
6,212,805	+				-0.2
6,212,805	+				+0.4
6,212,805	+				+0.4
6,212,805	+				+0.6
6,212,806	-				-2.2
6,212,925	+				+0.6
6,212,925	+				+0.5
6,212,925	+				-0.0
6,212,925	+				+0.5
6,212,996	-		PFLU_RS27905	0.15	-0.3
6,213,013	+		PFLU_RS27905	0.17	+0.3
6,213,013	+		PFLU_RS27905	0.17	+0.4
6,213,013	+		PFLU_RS27905	0.17	-1.1
6,213,013	+		PFLU_RS27905	0.17	+0.3
6,213,013	+		PFLU_RS27905	0.17	+0.9
6,213,013	+		PFLU_RS27905	0.17	+0.6
6,213,013	+		PFLU_RS27905	0.17	+0.9
6,213,013	+		PFLU_RS27905	0.17	+0.0
6,213,014	-		PFLU_RS27905	0.17	+0.8
6,213,014	-		PFLU_RS27905	0.17	+0.3
6,213,014	-		PFLU_RS27905	0.17	+0.3
6,213,014	-		PFLU_RS27905	0.17	-0.9
6,213,057	+		PFLU_RS27905	0.20	-0.1
6,213,057	+		PFLU_RS27905	0.20	-1.2
6,213,058	-		PFLU_RS27905	0.21	+0.3
6,213,058	-		PFLU_RS27905	0.21	+0.8
6,213,058	-		PFLU_RS27905	0.21	-0.4
6,213,252	+		PFLU_RS27905	0.36	+1.0
6,213,253	-		PFLU_RS27905	0.36	+0.9
6,213,277	+		PFLU_RS27905	0.38	-0.7
6,213,278	-		PFLU_RS27905	0.38	+1.5
6,213,278	-		PFLU_RS27905	0.38	+0.2
6,213,278	-		PFLU_RS27905	0.38	+0.5
6,213,278	-		PFLU_RS27905	0.38	+0.2
6,213,278	-		PFLU_RS27905	0.38	+0.1
6,213,278	-		PFLU_RS27905	0.38	-1.3
6,213,332	+		PFLU_RS27905	0.43	-0.6
6,213,332	+		PFLU_RS27905	0.43	+0.8
6,213,332	+		PFLU_RS27905	0.43	+0.9
6,213,350	+		PFLU_RS27905	0.44	-1.9
6,213,409	-		PFLU_RS27905	0.49	-2.2
6,213,409	-		PFLU_RS27905	0.49	+0.6
6,213,478	-		PFLU_RS27905	0.54	+0.8
6,213,620	+		PFLU_RS27905	0.66	-0.8
6,213,620	+		PFLU_RS27905	0.66	+0.6
6,213,620	+		PFLU_RS27905	0.66	+0.4
6,213,620	+		PFLU_RS27905	0.66	+0.8
6,213,620	+		PFLU_RS27905	0.66	-0.2
6,213,620	+		PFLU_RS27905	0.66	-0.3
6,213,621	-		PFLU_RS27905	0.66	+1.3
6,213,621	-		PFLU_RS27905	0.66	+0.0
6,213,621	-		PFLU_RS27905	0.66	-0.5
6,213,621	-		PFLU_RS27905	0.66	-0.5
6,213,621	-		PFLU_RS27905	0.66	+0.6
6,213,695	-		PFLU_RS27905	0.72	-0.4
6,213,697	-		PFLU_RS27905	0.72	+1.0
6,213,697	-		PFLU_RS27905	0.72	-0.6
6,213,727	+		PFLU_RS27905	0.74	+0.5
6,213,728	-		PFLU_RS27905	0.75	-0.1
6,213,729	+		PFLU_RS27905	0.75	+2.1
6,213,729	+		PFLU_RS27905	0.75	-0.1
6,213,729	+		PFLU_RS27905	0.75	+0.5
6,213,729	+		PFLU_RS27905	0.75	+1.3
6,213,729	+		PFLU_RS27905	0.75	-0.1
6,213,729	+		PFLU_RS27905	0.75	+0.3
6,213,729	+		PFLU_RS27905	0.75	-1.9
6,213,729	+		PFLU_RS27905	0.75	-0.1
6,213,729	+		PFLU_RS27905	0.75	-1.5
6,213,730	-		PFLU_RS27905	0.75	-0.1
6,213,730	-		PFLU_RS27905	0.75	-0.5
6,213,730	-		PFLU_RS27905	0.75	-0.1
6,213,730	-		PFLU_RS27905	0.75	+0.5
6,213,730	-		PFLU_RS27905	0.75	-0.1
6,213,730	-		PFLU_RS27905	0.75	-0.9
6,213,730	-		PFLU_RS27905	0.75	+0.5
6,213,730	-		PFLU_RS27905	0.75	+0.3
6,213,730	-		PFLU_RS27905	0.75	-0.0