Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS27385

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,089,794	+		PFLU_RS27380	0.44	-0.6
6,089,794	+		PFLU_RS27380	0.44	-2.3
6,089,794	+		PFLU_RS27380	0.44	-2.0
6,089,794	+		PFLU_RS27380	0.44	-2.4
6,089,794	+		PFLU_RS27380	0.44	-1.3
6,089,794	+		PFLU_RS27380	0.44	-4.0
6,089,794	+		PFLU_RS27380	0.44	-2.3
6,089,794	+		PFLU_RS27380	0.44	-1.7
6,089,794	+		PFLU_RS27380	0.44	-2.2
6,089,794	+		PFLU_RS27380	0.44	-2.4
6,089,794	+		PFLU_RS27380	0.44	-2.8
6,089,794	+		PFLU_RS27380	0.44	-2.3
6,089,794	+		PFLU_RS27380	0.44	-1.7
6,089,794	+		PFLU_RS27380	0.44	-1.4
6,089,795	-		PFLU_RS27380	0.44	+0.9
6,089,795	-		PFLU_RS27380	0.44	-0.4
6,089,795	-		PFLU_RS27380	0.44	-0.3
6,089,795	-		PFLU_RS27380	0.44	+0.2
6,089,795	-		PFLU_RS27380	0.44	+0.1
6,089,795	-		PFLU_RS27380	0.44	-0.5
6,089,795	-		PFLU_RS27380	0.44	-0.3
6,089,795	-		PFLU_RS27380	0.44	-0.2
6,089,795	-		PFLU_RS27380	0.44	-0.3
6,089,795	-		PFLU_RS27380	0.44	-0.1
6,089,795	-		PFLU_RS27380	0.44	+0.1
6,089,795	-		PFLU_RS27380	0.44	-0.5
6,089,795	-		PFLU_RS27380	0.44	-1.0
6,089,795	-		PFLU_RS27380	0.44	+0.9
6,089,795	-		PFLU_RS27380	0.44	+0.5
6,089,795	-		PFLU_RS27380	0.44	-3.3
6,089,795	-		PFLU_RS27380	0.44	-0.3
6,089,795	-		PFLU_RS27380	0.44	-0.4
6,089,795	-		PFLU_RS27380	0.44	-0.8
6,089,800	+		PFLU_RS27380	0.45	-3.2
6,089,800	+		PFLU_RS27380	0.45	-0.8
6,089,800	+		PFLU_RS27380	0.45	-3.8
6,089,800	+		PFLU_RS27380	0.45	-1.2
6,089,800	+		PFLU_RS27380	0.45	-3.0
6,089,800	+		PFLU_RS27380	0.45	-3.2
6,089,800	+		PFLU_RS27380	0.45	-1.4
6,089,801	-		PFLU_RS27380	0.45	+0.8
6,089,801	-		PFLU_RS27380	0.45	+0.6
6,089,801	-		PFLU_RS27380	0.45	+0.1
6,089,801	-		PFLU_RS27380	0.45	-0.0
6,089,801	-		PFLU_RS27380	0.45	+2.0
6,089,834	-		PFLU_RS27380	0.47	-1.0
6,089,914	+		PFLU_RS27380	0.52	-2.2
6,089,914	+		PFLU_RS27380	0.52	-2.2
6,089,914	+		PFLU_RS27380	0.52	-2.2
6,089,914	+		PFLU_RS27380	0.52	-2.1
6,089,914	+		PFLU_RS27380	0.52	-4.5
6,089,914	+		PFLU_RS27380	0.52	-3.2
6,089,914	+		PFLU_RS27380	0.52	-1.8
6,089,914	+		PFLU_RS27380	0.52	-2.1
6,089,914	+		PFLU_RS27380	0.52	-3.4
6,089,914	+		PFLU_RS27380	0.52	-3.8
6,089,914	+		PFLU_RS27380	0.52	-2.3
6,089,914	+		PFLU_RS27380	0.52	-1.5
6,089,914	+		PFLU_RS27380	0.52	-2.9
6,089,915	-		PFLU_RS27380	0.52	-1.6
6,089,915	-		PFLU_RS27380	0.52	-0.1
6,089,915	-		PFLU_RS27380	0.52	+0.7
6,089,915	-		PFLU_RS27380	0.52	-0.7
6,089,915	-		PFLU_RS27380	0.52	+0.0
6,089,915	-		PFLU_RS27380	0.52	-0.4
6,089,915	-		PFLU_RS27380	0.52	+0.3
6,089,915	-		PFLU_RS27380	0.52	-0.2
6,089,915	-		PFLU_RS27380	0.52	+0.3
6,089,915	-		PFLU_RS27380	0.52	-1.7
6,089,915	-		PFLU_RS27380	0.52	-0.5
6,089,915	-		PFLU_RS27380	0.52	-0.3
6,089,915	-		PFLU_RS27380	0.52	+0.4
6,089,915	-		PFLU_RS27380	0.52	-1.2
6,089,915	-		PFLU_RS27380	0.52	-1.1
6,089,944	+		PFLU_RS27380	0.54	-2.6
6,090,232	+		PFLU_RS27380	0.74	-2.8
6,090,232	+		PFLU_RS27380	0.74	-2.4
6,090,232	+		PFLU_RS27380	0.74	-0.9
6,090,233	-		PFLU_RS27380	0.74	-3.8
6,090,233	-		PFLU_RS27380	0.74	-2.2
6,090,256	+		PFLU_RS27380	0.75	-1.3
6,090,256	+		PFLU_RS27380	0.75	-2.4
6,090,310	+		PFLU_RS27380	0.79	-2.3
6,090,310	+		PFLU_RS27380	0.79	-1.8
6,090,310	+		PFLU_RS27380	0.79	-0.3
6,090,310	+		PFLU_RS27380	0.79	-1.3
6,090,408	+		PFLU_RS27380	0.86	-1.6
6,090,408	+		PFLU_RS27380	0.86	-1.9
6,090,408	+		PFLU_RS27380	0.86	-2.6
6,090,408	+		PFLU_RS27380	0.86	-2.5
6,090,409	-		PFLU_RS27380	0.86	-2.6
6,090,409	-		PFLU_RS27380	0.86	-2.7
6,090,409	-		PFLU_RS27380	0.86	-1.0
6,090,409	-		PFLU_RS27380	0.86	-3.1
6,090,490	+				-3.6
6,090,490	+				-1.9
6,090,490	+				-0.6
6,090,491	-				-1.7
6,090,491	-				-0.4
6,090,491	-				-3.5
6,090,491	-				-0.9
6,090,520	+				-2.7
6,090,520	+				-1.2
6,090,579	-				-2.7
6,090,623	+				-1.8
6,090,623	+				-2.3
6,090,623	+				-0.7
6,090,623	+				-1.9
6,090,624	-				-2.9
6,090,624	-				-1.2
6,090,624	-				+1.4
6,090,624	-				+0.9
6,090,624	-				+0.2
6,090,624	-				-0.8
6,090,624	-				-1.0
6,090,645	+				-1.9
6,090,645	+				+0.4
6,090,645	+				-1.3
6,090,645	+				-2.0
6,090,646	-				-0.3
6,090,646	-				+1.2
6,090,646	-				-0.8
6,090,646	-				-0.2
6,090,646	-				+1.4
6,090,646	-				+0.1
6,090,646	-				-1.6
6,090,646	-				-1.2
6,090,656	+				-0.9
6,090,656	+				-0.7
6,090,657	-				+1.4
6,090,657	-				+0.1
6,090,657	-				+1.3
6,090,726	+				-0.6
6,090,726	+				-0.8
6,090,726	+				-2.9
6,090,727	-				-0.2
6,090,802	+		PFLU_RS27385	0.14	-2.5
6,090,803	-		PFLU_RS27385	0.14	-0.6
6,090,803	-		PFLU_RS27385	0.14	-0.3
6,090,803	-		PFLU_RS27385	0.14	+0.6
6,090,803	-		PFLU_RS27385	0.14	-0.8
6,090,897	+		PFLU_RS27385	0.25	-0.5
6,090,897	+		PFLU_RS27385	0.25	-0.6
6,090,898	-		PFLU_RS27385	0.25	-1.5
6,090,898	-		PFLU_RS27385	0.25	-2.8
6,090,899	+		PFLU_RS27385	0.25	-1.0
6,090,900	-		PFLU_RS27385	0.26	-1.0
6,090,905	+		PFLU_RS27385	0.26	+0.2
6,090,905	+		PFLU_RS27385	0.26	-0.0
6,090,917	-		PFLU_RS27385	0.28	-0.6
6,090,917	-		PFLU_RS27385	0.28	+0.7
6,091,444	-				+0.4
6,091,444	-				+0.5
6,091,444	-				+1.1
6,092,199	+				-0.1
6,092,200	-				+1.3
6,092,200	-				-0.2
6,092,200	-				-1.8
6,092,200	-				-0.6
6,092,221	+				+0.0
6,092,221	+				+0.5
6,092,221	+				+0.7
6,092,221	+				-0.1
6,092,221	+				-1.7
6,092,221	+				-1.8
6,092,221	+				+0.4
6,092,221	+				+0.3
6,092,221	+				-0.1
6,092,221	+				+0.5
6,092,221	+				-1.3
6,092,221	+				+0.9
6,092,221	+				+0.7
6,092,221	+				+0.3
6,092,221	+				-0.1
6,092,221	+				-0.9
6,092,221	+				-1.4
6,092,221	+				+0.5
6,092,221	+				+0.6
6,092,221	+				-1.3
6,092,222	-				-0.9
6,092,222	-				-0.4
6,092,222	-				+0.9
6,092,222	-				-1.2
6,092,222	-				+0.1
6,092,222	-				-1.1
6,092,222	-				+1.2
6,092,222	-				-1.4
6,092,222	-				-1.2
6,092,222	-				+1.5
6,092,222	-				+0.5
6,092,222	-				+0.1
6,092,222	-				+0.0
6,092,222	-				+0.9
6,092,222	-				+0.4
6,092,222	-				-0.8
6,092,222	-				+0.9
6,092,222	-				-1.6
6,092,222	-				-0.1
6,092,222	-				-0.3
6,092,222	-				-0.6
6,092,222	-				-1.5
6,092,222	-				-0.2
6,092,222	-				-0.3
6,092,222	-				+0.7
6,092,222	-				+0.6
6,092,222	-				-0.2
6,092,222	-				+1.8
6,092,222	-				-0.5
6,092,223	+				-0.2
6,092,223	+				+0.2
6,092,223	+				+0.1
6,092,223	+				+0.4
6,092,223	+				+0.3
6,092,223	+				+0.6
6,092,223	+				-0.3
6,092,223	+				+1.2
6,092,223	+				+0.3
6,092,223	+				+0.1
6,092,223	+				+1.2
6,092,223	+				+0.3
6,092,223	+				+1.0
6,092,223	+				+1.5
6,092,224	-				-0.6
6,092,224	-				-0.8
6,092,224	-				-0.1
6,092,224	-				+1.0
6,092,224	-				+1.1
6,092,266	+				-0.3
6,092,267	-				-1.8
6,092,269	+				+0.2
6,092,270	-				+0.5
6,092,270	-				-0.7
6,092,282	-				-1.4
6,092,415	-		PFLU_RS27395	0.13	-0.3
6,092,418	+		PFLU_RS27395	0.13	+0.1
6,092,418	+		PFLU_RS27395	0.13	+0.2
6,092,418	+		PFLU_RS27395	0.13	+0.1
6,092,418	+		PFLU_RS27395	0.13	-0.2
6,092,419	-		PFLU_RS27395	0.13	-0.5
6,092,419	-		PFLU_RS27395	0.13	-0.4
6,092,419	-		PFLU_RS27395	0.13	+0.8
6,092,419	-		PFLU_RS27395	0.13	+0.5
6,092,419	-		PFLU_RS27395	0.13	-0.4
6,092,419	-		PFLU_RS27395	0.13	-0.0