Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS14605

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
3,262,929	-				+0.6
3,262,929	-				-0.1
3,262,943	+				+0.4
3,262,943	+				+0.6
3,262,944	-				+0.8
3,262,957	+				-0.7
3,262,957	+				-0.5
3,262,958	-				-1.1
3,262,967	+				+0.8
3,263,083	+		PFLU_RS14600	0.13	+0.7
3,263,083	+		PFLU_RS14600	0.13	+1.4
3,263,083	+		PFLU_RS14600	0.13	+1.2
3,263,083	+		PFLU_RS14600	0.13	+1.2
3,263,083	+		PFLU_RS14600	0.13	+1.6
3,263,083	+		PFLU_RS14600	0.13	+0.9
3,263,083	+		PFLU_RS14600	0.13	+0.8
3,263,084	-		PFLU_RS14600	0.14	+0.8
3,263,084	-		PFLU_RS14600	0.14	-0.2
3,263,084	-		PFLU_RS14600	0.14	+0.5
3,263,084	-		PFLU_RS14600	0.14	+0.6
3,263,084	-		PFLU_RS14600	0.14	+1.1
3,263,084	-		PFLU_RS14600	0.14	-0.4
3,263,084	-		PFLU_RS14600	0.14	-0.3
3,263,084	-		PFLU_RS14600	0.14	-0.2
3,263,084	-		PFLU_RS14600	0.14	+1.1
3,263,087	+		PFLU_RS14600	0.14	-0.5
3,263,087	+		PFLU_RS14600	0.14	+1.4
3,263,087	+		PFLU_RS14600	0.14	+1.7
3,263,087	+		PFLU_RS14600	0.14	-0.2
3,263,087	+		PFLU_RS14600	0.14	-0.8
3,263,088	-		PFLU_RS14600	0.14	+0.3
3,263,088	-		PFLU_RS14600	0.14	+0.7
3,263,088	-		PFLU_RS14600	0.14	-0.5
3,263,088	-		PFLU_RS14600	0.14	-0.7
3,263,088	-		PFLU_RS14600	0.14	+0.3
3,263,319	+		PFLU_RS14600	0.41	+0.6
3,263,319	+		PFLU_RS14600	0.41	+0.2
3,263,319	+		PFLU_RS14600	0.41	+0.1
3,263,320	-		PFLU_RS14600	0.41	-1.5
3,263,320	-		PFLU_RS14600	0.41	-1.5
3,263,320	-		PFLU_RS14600	0.41	-0.0
3,263,320	-		PFLU_RS14600	0.41	+1.3
3,263,342	-		PFLU_RS14600	0.43	-0.4
3,263,392	+		PFLU_RS14600	0.49	+1.3
3,263,392	+		PFLU_RS14600	0.49	-0.3
3,263,393	-		PFLU_RS14600	0.49	-0.7
3,263,522	+		PFLU_RS14600	0.64	+0.1
3,263,522	+		PFLU_RS14600	0.64	+0.5
3,263,522	+		PFLU_RS14600	0.64	+0.7
3,263,523	-		PFLU_RS14600	0.64	-0.4
3,263,523	-		PFLU_RS14600	0.64	-0.5
3,263,523	-		PFLU_RS14600	0.64	+0.0
3,263,608	-		PFLU_RS14600	0.74	+1.8
3,263,608	-		PFLU_RS14600	0.74	-1.0
3,263,608	-		PFLU_RS14600	0.74	+1.8
3,263,608	-		PFLU_RS14600	0.74	-0.5
3,263,608	-		PFLU_RS14600	0.74	-0.6
3,263,658	+		PFLU_RS14600	0.80	-1.8
3,263,916	+				-1.4
3,263,916	+				-0.9
3,263,916	+				+0.7
3,263,916	+				-2.2
3,263,916	+				+0.8
3,263,917	-				-0.9
3,263,917	-				-0.5
3,263,917	-				-1.3
3,263,917	-				+0.8
3,263,940	+				-1.2
3,263,940	+				-0.9
3,263,940	+				+1.3
3,263,940	+				+0.7
3,263,940	+				-0.9
3,263,940	+				+1.0
3,263,940	+				+0.5
3,263,940	+				-0.1
3,263,941	-				+0.9
3,263,941	-				+1.1
3,263,941	-				+0.2
3,264,089	+		PFLU_RS14605	0.19	-0.8
3,264,090	-		PFLU_RS14605	0.19	+0.8
3,264,162	+		PFLU_RS14605	0.27	+0.8
3,264,163	-		PFLU_RS14605	0.27	-0.3
3,264,163	-		PFLU_RS14605	0.27	+1.4
3,264,192	+		PFLU_RS14605	0.30	+0.3
3,264,192	+		PFLU_RS14605	0.30	+0.1
3,264,192	+		PFLU_RS14605	0.30	-1.2
3,264,193	-		PFLU_RS14605	0.30	+0.3
3,264,310	+		PFLU_RS14605	0.43	+0.0
3,264,310	+		PFLU_RS14605	0.43	-0.9
3,264,310	+		PFLU_RS14605	0.43	-1.7
3,264,310	+		PFLU_RS14605	0.43	+0.2
3,264,311	-		PFLU_RS14605	0.43	+0.5
3,264,429	+		PFLU_RS14605	0.56	+0.4
3,264,429	+		PFLU_RS14605	0.56	+0.3
3,264,429	+		PFLU_RS14605	0.56	-0.2
3,264,430	-		PFLU_RS14605	0.56	+0.8
3,264,430	-		PFLU_RS14605	0.56	+1.0
3,264,430	-		PFLU_RS14605	0.56	+1.0
3,264,430	-		PFLU_RS14605	0.56	-0.8
3,264,430	-		PFLU_RS14605	0.56	-0.3
3,264,430	-		PFLU_RS14605	0.56	+1.4
3,264,430	-		PFLU_RS14605	0.56	+0.2
3,264,597	+		PFLU_RS14605	0.74	+0.7
3,264,597	+		PFLU_RS14605	0.74	+1.5
3,264,597	+		PFLU_RS14605	0.74	-2.6
3,264,598	-		PFLU_RS14605	0.74	+0.9
3,264,598	-		PFLU_RS14605	0.74	-1.3
3,264,598	-		PFLU_RS14605	0.74	+1.6
3,264,598	-		PFLU_RS14605	0.74	+0.3
3,264,627	+		PFLU_RS14605	0.77	+0.6
3,264,627	+		PFLU_RS14605	0.77	+1.0
3,264,627	+		PFLU_RS14605	0.77	-1.3
3,264,628	-		PFLU_RS14605	0.77	+1.3
3,264,628	-		PFLU_RS14605	0.77	+0.2
3,264,628	-		PFLU_RS14605	0.77	-0.2
3,264,639	+		PFLU_RS14605	0.79	+0.3
3,264,639	+		PFLU_RS14605	0.79	-0.5
3,264,639	+		PFLU_RS14605	0.79	-0.2
3,264,639	+		PFLU_RS14605	0.79	+0.6
3,264,639	+		PFLU_RS14605	0.79	-1.1
3,264,639	+		PFLU_RS14605	0.79	+0.6
3,264,639	+		PFLU_RS14605	0.79	-1.4
3,264,639	+		PFLU_RS14605	0.79	+0.6
3,264,639	+		PFLU_RS14605	0.79	-0.6
3,264,639	+		PFLU_RS14605	0.79	+0.2
3,264,640	-		PFLU_RS14605	0.79	-1.0
3,264,640	-		PFLU_RS14605	0.79	+0.3
3,264,640	-		PFLU_RS14605	0.79	-1.3
3,264,640	-		PFLU_RS14605	0.79	+0.4
3,264,640	-		PFLU_RS14605	0.79	-1.7
3,264,640	-		PFLU_RS14605	0.79	+0.3
3,264,640	-		PFLU_RS14605	0.79	+0.8
3,264,640	-		PFLU_RS14605	0.79	-0.8
3,264,680	-		PFLU_RS14605	0.83	-0.1
3,264,692	+		PFLU_RS14605	0.84	+0.8
3,264,789	+				+0.5
3,264,789	+				+0.1
3,264,789	+				+1.5
3,264,789	+				-2.1
3,264,789	+				-0.8
3,264,789	+				-0.1
3,264,789	+				-0.3
3,264,789	+				+0.2
3,264,789	+				-0.4
3,264,790	-				+0.2
3,264,790	-				+0.4
3,264,790	-				-0.9
3,264,790	-				-0.2
3,264,790	-				+0.0
3,264,790	-				-2.0
3,264,790	-				+0.9
3,264,790	-				-0.7
3,264,790	-				-0.6
3,264,790	-				+0.4
3,264,790	-				+0.1
3,264,790	-				-0.8
3,264,790	-				-0.1
3,264,790	-				-0.1
3,264,790	-				+0.1
3,264,837	+				-0.2
3,264,843	+				-0.2
3,264,844	-				-0.5
3,264,879	+				+0.2
3,264,885	+				-0.1
3,264,886	-				+0.4
3,264,917	+				-0.8
3,264,917	+				-0.1
3,264,917	+				+0.2
3,264,917	+				-0.4
3,264,949	+				+0.2
3,264,949	+				+0.6
3,265,056	+				+0.6
3,265,056	+				-0.6
3,265,056	+				-0.0
3,265,056	+				+0.3
3,265,057	-				-1.0
3,265,057	-				+0.1
3,265,091	+				+0.3
3,265,091	+				-0.8
3,265,092	-				-0.5
3,265,092	-				+0.8
3,265,094	-				+1.3
3,265,258	-		PFLU_RS14610	0.16	-1.2
3,265,285	+		PFLU_RS14610	0.19	+0.8
3,265,285	+		PFLU_RS14610	0.19	-0.2
3,265,286	-		PFLU_RS14610	0.19	-0.4
3,265,286	-		PFLU_RS14610	0.19	-0.2
3,265,354	+		PFLU_RS14610	0.25	-0.4
3,265,355	-		PFLU_RS14610	0.25	-2.6
3,265,456	+		PFLU_RS14610	0.35	-0.3
3,265,456	+		PFLU_RS14610	0.35	-0.8
3,265,456	+		PFLU_RS14610	0.35	-0.4
3,265,457	-		PFLU_RS14610	0.35	-0.8
3,265,457	-		PFLU_RS14610	0.35	-0.5
3,265,457	-		PFLU_RS14610	0.35	+3.4
3,265,492	+		PFLU_RS14610	0.38	-2.0
3,265,492	+		PFLU_RS14610	0.38	+1.9
3,265,493	-		PFLU_RS14610	0.38	+0.7
3,265,493	-		PFLU_RS14610	0.38	+0.0
3,265,510	+		PFLU_RS14610	0.40	+1.8
3,265,510	+		PFLU_RS14610	0.40	-0.8
3,265,511	-		PFLU_RS14610	0.40	+0.3
3,265,511	-		PFLU_RS14610	0.40	-0.3
3,265,511	-		PFLU_RS14610	0.40	-2.4
3,265,669	+		PFLU_RS14610	0.55	-0.8
3,265,670	-		PFLU_RS14610	0.55	-0.5
3,265,670	-		PFLU_RS14610	0.55	-0.2
3,265,670	-		PFLU_RS14610	0.55	-1.2
3,265,671	+		PFLU_RS14610	0.55	-0.9
3,265,794	+		PFLU_RS14610	0.66	+0.4
3,265,795	-		PFLU_RS14610	0.66	+0.1