Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20950 and OH686_20955 are separated by 92 nucleotides OH686_20955 and OH686_20960 are separated by 11 nucleotides OH686_20960 and OH686_20965 are separated by 15 nucleotides OH686_20965 and OH686_20970 are separated by 57 nucleotides
OH686_20950: OH686_20950 - Uncharacterized MFS-type transporter, at 4,284,322 to 4,285,482
_20950
OH686_20955: OH686_20955 - Uncharacterized protein, at 4,285,575 to 4,286,003
_20955
OH686_20960: OH686_20960 - Protein of unknown function UPF0060, at 4,286,015 to 4,286,347
_20960
OH686_20965: OH686_20965 - hypothetical protein, at 4,286,363 to 4,286,593
_20965
OH686_20970: OH686_20970 - Sensor histidine kinase/response regulator, at 4,286,651 to 4,289,407
_20970
Position (kb) 4285
4286
4287 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4284.727 kb on + strand, within OH686_20950 at 4284.727 kb on + strand, within OH686_20950 at 4284.727 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.979 kb on + strand, within OH686_20950 at 4284.980 kb on - strand, within OH686_20950 at 4284.980 kb on - strand, within OH686_20950 at 4284.980 kb on - strand, within OH686_20950 at 4284.980 kb on - strand, within OH686_20950 at 4285.010 kb on - strand, within OH686_20950 at 4285.036 kb on + strand, within OH686_20950 at 4285.036 kb on + strand, within OH686_20950 at 4285.036 kb on + strand, within OH686_20950 at 4285.036 kb on + strand, within OH686_20950 at 4285.036 kb on + strand, within OH686_20950 at 4285.273 kb on + strand, within OH686_20950 at 4285.273 kb on + strand, within OH686_20950 at 4285.273 kb on + strand, within OH686_20950 at 4285.274 kb on - strand, within OH686_20950 at 4285.274 kb on - strand, within OH686_20950 at 4285.274 kb on - strand, within OH686_20950 at 4285.393 kb on + strand at 4285.480 kb on + strand at 4285.542 kb on + strand at 4285.542 kb on + strand at 4285.542 kb on + strand at 4285.542 kb on + strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.543 kb on - strand at 4285.596 kb on + strand at 4285.597 kb on - strand at 4285.597 kb on - strand at 4285.597 kb on - strand at 4285.597 kb on - strand at 4285.755 kb on + strand, within OH686_20955 at 4285.756 kb on - strand, within OH686_20955 at 4285.756 kb on - strand, within OH686_20955 at 4285.756 kb on - strand, within OH686_20955 at 4285.788 kb on + strand, within OH686_20955 at 4285.788 kb on + strand, within OH686_20955 at 4285.788 kb on + strand, within OH686_20955 at 4285.788 kb on + strand, within OH686_20955 at 4285.788 kb on + strand, within OH686_20955 at 4285.789 kb on - strand, within OH686_20955 at 4285.789 kb on - strand, within OH686_20955 at 4285.803 kb on + strand, within OH686_20955 at 4285.803 kb on + strand, within OH686_20955 at 4285.804 kb on - strand, within OH686_20955 at 4285.804 kb on - strand, within OH686_20955 at 4285.804 kb on - strand, within OH686_20955 at 4285.854 kb on + strand, within OH686_20955 at 4285.855 kb on - strand, within OH686_20955 at 4285.855 kb on - strand, within OH686_20955 at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.024 kb on + strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.025 kb on - strand at 4286.069 kb on + strand, within OH686_20960 at 4286.070 kb on - strand, within OH686_20960 at 4286.177 kb on + strand, within OH686_20960 at 4286.177 kb on + strand, within OH686_20960 at 4286.177 kb on + strand, within OH686_20960 at 4286.178 kb on - strand, within OH686_20960 at 4286.178 kb on - strand, within OH686_20960 at 4286.192 kb on + strand, within OH686_20960 at 4286.202 kb on - strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.213 kb on + strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.214 kb on - strand, within OH686_20960 at 4286.657 kb on + strand at 4286.657 kb on + strand at 4286.685 kb on + strand at 4286.686 kb on - strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.703 kb on + strand at 4286.704 kb on - strand at 4286.704 kb on - strand at 4286.704 kb on - strand at 4286.704 kb on - strand at 4286.704 kb on - strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.705 kb on + strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.706 kb on - strand at 4286.805 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 4,284,727 + OH686_20950 0.35 -0.1 4,284,727 + OH686_20950 0.35 -0.5 4,284,727 + OH686_20950 0.35 +0.1 4,284,979 + OH686_20950 0.57 -0.2 4,284,979 + OH686_20950 0.57 -0.4 4,284,979 + OH686_20950 0.57 +0.4 4,284,979 + OH686_20950 0.57 +0.0 4,284,979 + OH686_20950 0.57 +0.6 4,284,979 + OH686_20950 0.57 +0.2 4,284,979 + OH686_20950 0.57 +0.6 4,284,979 + OH686_20950 0.57 +0.9 4,284,980 - OH686_20950 0.57 +0.0 4,284,980 - OH686_20950 0.57 +0.5 4,284,980 - OH686_20950 0.57 -0.5 4,284,980 - OH686_20950 0.57 +0.4 4,285,010 - OH686_20950 0.59 +0.2 4,285,036 + OH686_20950 0.61 +1.1 4,285,036 + OH686_20950 0.61 +1.4 4,285,036 + OH686_20950 0.61 -0.3 4,285,036 + OH686_20950 0.61 +0.2 4,285,036 + OH686_20950 0.61 -0.1 4,285,273 + OH686_20950 0.82 -0.5 4,285,273 + OH686_20950 0.82 -0.5 4,285,273 + OH686_20950 0.82 +0.5 4,285,274 - OH686_20950 0.82 -0.7 4,285,274 - OH686_20950 0.82 +0.4 4,285,274 - OH686_20950 0.82 +0.1 4,285,393 + -1.5 4,285,480 + -0.6 4,285,542 + -0.0 4,285,542 + -0.2 4,285,542 + +0.7 4,285,542 + +0.3 4,285,543 - +0.1 4,285,543 - -0.5 4,285,543 - +0.0 4,285,543 - -0.1 4,285,543 - -0.7 4,285,543 - -0.2 4,285,543 - +0.2 4,285,543 - +0.1 4,285,543 - -0.5 4,285,543 - +0.2 4,285,543 - +0.4 4,285,596 + -0.2 4,285,597 - -0.2 4,285,597 - -0.9 4,285,597 - +0.2 4,285,597 - -0.1 4,285,755 + OH686_20955 0.42 -0.1 4,285,756 - OH686_20955 0.42 -2.1 4,285,756 - OH686_20955 0.42 -0.0 4,285,756 - OH686_20955 0.42 +0.3 4,285,788 + OH686_20955 0.50 -0.3 4,285,788 + OH686_20955 0.50 +0.2 4,285,788 + OH686_20955 0.50 -1.2 4,285,788 + OH686_20955 0.50 +0.5 4,285,788 + OH686_20955 0.50 -0.2 4,285,789 - OH686_20955 0.50 -1.6 4,285,789 - OH686_20955 0.50 +1.5 4,285,803 + OH686_20955 0.53 -0.5 4,285,803 + OH686_20955 0.53 +0.6 4,285,804 - OH686_20955 0.53 +0.2 4,285,804 - OH686_20955 0.53 -0.3 4,285,804 - OH686_20955 0.53 +0.5 4,285,854 + OH686_20955 0.65 -0.6 4,285,855 - OH686_20955 0.65 -1.0 4,285,855 - OH686_20955 0.65 +0.4 4,286,024 + -0.6 4,286,024 + -0.4 4,286,024 + -1.8 4,286,024 + +0.9 4,286,024 + +0.1 4,286,024 + +1.5 4,286,024 + +0.4 4,286,024 + -1.6 4,286,024 + +0.3 4,286,024 + -0.1 4,286,024 + -0.8 4,286,024 + +2.0 4,286,024 + +0.3 4,286,024 + -0.1 4,286,024 + +0.1 4,286,024 + +0.2 4,286,024 + -0.1 4,286,024 + -1.8 4,286,025 - +0.6 4,286,025 - -0.4 4,286,025 - -0.0 4,286,025 - +0.9 4,286,025 - -0.7 4,286,025 - -1.6 4,286,025 - -0.7 4,286,025 - +0.4 4,286,025 - +0.3 4,286,025 - -1.1 4,286,025 - +0.5 4,286,025 - -0.2 4,286,025 - +1.1 4,286,025 - +1.0 4,286,025 - -0.5 4,286,025 - +0.6 4,286,069 + OH686_20960 0.16 +0.5 4,286,070 - OH686_20960 0.17 -0.5 4,286,177 + OH686_20960 0.49 +0.2 4,286,177 + OH686_20960 0.49 -0.7 4,286,177 + OH686_20960 0.49 -0.7 4,286,178 - OH686_20960 0.49 -0.1 4,286,178 - OH686_20960 0.49 -0.7 4,286,192 + OH686_20960 0.53 +0.2 4,286,202 - OH686_20960 0.56 -0.7 4,286,213 + OH686_20960 0.59 +0.9 4,286,213 + OH686_20960 0.59 +3.0 4,286,213 + OH686_20960 0.59 -0.7 4,286,213 + OH686_20960 0.59 -0.1 4,286,213 + OH686_20960 0.59 -0.3 4,286,213 + OH686_20960 0.59 -0.6 4,286,213 + OH686_20960 0.59 +0.2 4,286,213 + OH686_20960 0.59 +0.0 4,286,213 + OH686_20960 0.59 -0.6 4,286,213 + OH686_20960 0.59 +0.5 4,286,213 + OH686_20960 0.59 -0.3 4,286,213 + OH686_20960 0.59 -2.1 4,286,214 - OH686_20960 0.60 +0.5 4,286,214 - OH686_20960 0.60 +0.9 4,286,214 - OH686_20960 0.60 +0.3 4,286,214 - OH686_20960 0.60 +0.7 4,286,214 - OH686_20960 0.60 -0.0 4,286,214 - OH686_20960 0.60 +0.5 4,286,214 - OH686_20960 0.60 -1.2 4,286,214 - OH686_20960 0.60 -1.5 4,286,214 - OH686_20960 0.60 -0.5 4,286,214 - OH686_20960 0.60 -0.6 4,286,657 + +0.0 4,286,657 + +0.7 4,286,685 + -0.7 4,286,686 - -1.2 4,286,703 + -1.2 4,286,703 + +0.3 4,286,703 + -0.6 4,286,703 + +0.4 4,286,703 + +1.0 4,286,703 + -0.1 4,286,703 + +0.3 4,286,704 - -0.2 4,286,704 - -1.4 4,286,704 - +0.6 4,286,704 - +0.0 4,286,704 - +0.5 4,286,705 + -0.1 4,286,705 + +0.4 4,286,705 + -0.1 4,286,705 + +0.2 4,286,705 + -0.7 4,286,705 + -0.6 4,286,705 + -1.1 4,286,705 + +0.4 4,286,705 + +0.2 4,286,705 + -0.7 4,286,705 + +0.7 4,286,706 - -0.7 4,286,706 - +0.1 4,286,706 - -0.0 4,286,706 - +0.4 4,286,706 - -0.2 4,286,706 - -1.2 4,286,706 - +1.6 4,286,706 - -0.4 4,286,706 - -0.1 4,286,706 - -0.5 4,286,805 - -0.9
Or see this region's nucleotide sequence