Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_17895 and OH686_17900 are separated by 116 nucleotides OH686_17900 and OH686_17905 are separated by 107 nucleotides
OH686_17895: OH686_17895 - ferrochelatase, at 3,729,588 to 3,730,610
_17895
OH686_17900: OH686_17900 - hypothetical protein, at 3,730,727 to 3,731,497
_17900
OH686_17905: OH686_17905 - Two-component transcriptional response regulator, LuxR family, at 3,731,605 to 3,733,032
_17905
Position (kb)
3730
3731
3732 Strain fitness (log2 ratio)
-1
0
1
2 at 3730.725 kb on + strand at 3730.725 kb on + strand at 3730.725 kb on + strand at 3730.726 kb on - strand at 3730.726 kb on - strand at 3730.726 kb on - strand at 3730.728 kb on + strand at 3730.729 kb on - strand at 3730.729 kb on - strand at 3731.052 kb on + strand, within OH686_17900 at 3731.052 kb on + strand, within OH686_17900 at 3731.052 kb on + strand, within OH686_17900 at 3731.052 kb on + strand, within OH686_17900 at 3731.052 kb on + strand, within OH686_17900 at 3731.053 kb on - strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.163 kb on + strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.164 kb on - strand, within OH686_17900 at 3731.265 kb on - strand, within OH686_17900 at 3731.357 kb on + strand, within OH686_17900 at 3731.357 kb on + strand, within OH686_17900 at 3731.959 kb on - strand, within OH686_17905 at 3731.998 kb on - strand, within OH686_17905 at 3731.998 kb on - strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.070 kb on + strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.071 kb on - strand, within OH686_17905 at 3732.322 kb on + strand, within OH686_17905 at 3732.366 kb on - strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.450 kb on + strand, within OH686_17905 at 3732.451 kb on - strand, within OH686_17905 at 3732.451 kb on - strand, within OH686_17905 at 3732.451 kb on - strand, within OH686_17905 at 3732.451 kb on - strand, within OH686_17905 at 3732.451 kb on - strand, within OH686_17905
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 3,730,725 + +0.5 3,730,725 + +0.1 3,730,725 + -0.7 3,730,726 - -0.9 3,730,726 - +0.2 3,730,726 - -0.2 3,730,728 + +0.6 3,730,729 - +0.6 3,730,729 - +1.6 3,731,052 + OH686_17900 0.42 -0.8 3,731,052 + OH686_17900 0.42 -0.0 3,731,052 + OH686_17900 0.42 -0.5 3,731,052 + OH686_17900 0.42 +0.0 3,731,052 + OH686_17900 0.42 +0.4 3,731,053 - OH686_17900 0.42 +1.0 3,731,163 + OH686_17900 0.57 -1.3 3,731,163 + OH686_17900 0.57 -0.3 3,731,163 + OH686_17900 0.57 +0.5 3,731,163 + OH686_17900 0.57 +0.3 3,731,163 + OH686_17900 0.57 -0.3 3,731,163 + OH686_17900 0.57 -0.1 3,731,163 + OH686_17900 0.57 -1.1 3,731,163 + OH686_17900 0.57 +0.1 3,731,163 + OH686_17900 0.57 -0.4 3,731,163 + OH686_17900 0.57 -0.2 3,731,163 + OH686_17900 0.57 +0.1 3,731,163 + OH686_17900 0.57 -0.3 3,731,163 + OH686_17900 0.57 +0.8 3,731,163 + OH686_17900 0.57 +0.2 3,731,163 + OH686_17900 0.57 -1.0 3,731,163 + OH686_17900 0.57 +0.1 3,731,163 + OH686_17900 0.57 -1.3 3,731,164 - OH686_17900 0.57 -0.3 3,731,164 - OH686_17900 0.57 -0.2 3,731,164 - OH686_17900 0.57 +0.2 3,731,164 - OH686_17900 0.57 -0.8 3,731,164 - OH686_17900 0.57 -0.2 3,731,164 - OH686_17900 0.57 -0.4 3,731,164 - OH686_17900 0.57 +0.5 3,731,164 - OH686_17900 0.57 -0.1 3,731,164 - OH686_17900 0.57 +0.2 3,731,164 - OH686_17900 0.57 +0.7 3,731,164 - OH686_17900 0.57 +1.7 3,731,164 - OH686_17900 0.57 -0.4 3,731,164 - OH686_17900 0.57 -0.4 3,731,164 - OH686_17900 0.57 -0.4 3,731,164 - OH686_17900 0.57 +0.7 3,731,164 - OH686_17900 0.57 -1.4 3,731,164 - OH686_17900 0.57 +0.6 3,731,164 - OH686_17900 0.57 -0.0 3,731,164 - OH686_17900 0.57 -0.0 3,731,164 - OH686_17900 0.57 -0.1 3,731,164 - OH686_17900 0.57 +1.0 3,731,164 - OH686_17900 0.57 +0.2 3,731,164 - OH686_17900 0.57 +1.7 3,731,164 - OH686_17900 0.57 +0.0 3,731,164 - OH686_17900 0.57 +0.9 3,731,265 - OH686_17900 0.70 -0.9 3,731,357 + OH686_17900 0.82 -0.9 3,731,357 + OH686_17900 0.82 +0.6 3,731,959 - OH686_17905 0.25 -0.3 3,731,998 - OH686_17905 0.28 -0.6 3,731,998 - OH686_17905 0.28 -0.2 3,732,070 + OH686_17905 0.33 -0.3 3,732,070 + OH686_17905 0.33 +0.9 3,732,070 + OH686_17905 0.33 -0.3 3,732,070 + OH686_17905 0.33 -0.2 3,732,070 + OH686_17905 0.33 -0.6 3,732,070 + OH686_17905 0.33 -0.2 3,732,070 + OH686_17905 0.33 +0.1 3,732,070 + OH686_17905 0.33 +0.9 3,732,070 + OH686_17905 0.33 +0.9 3,732,071 - OH686_17905 0.33 -0.7 3,732,071 - OH686_17905 0.33 -0.1 3,732,071 - OH686_17905 0.33 -0.8 3,732,071 - OH686_17905 0.33 -0.4 3,732,071 - OH686_17905 0.33 -0.0 3,732,071 - OH686_17905 0.33 -0.7 3,732,071 - OH686_17905 0.33 -0.9 3,732,071 - OH686_17905 0.33 +0.3 3,732,071 - OH686_17905 0.33 +0.5 3,732,071 - OH686_17905 0.33 +0.2 3,732,071 - OH686_17905 0.33 +0.1 3,732,071 - OH686_17905 0.33 +0.2 3,732,071 - OH686_17905 0.33 +0.0 3,732,071 - OH686_17905 0.33 -0.7 3,732,322 + OH686_17905 0.50 +1.8 3,732,366 - OH686_17905 0.53 +0.1 3,732,450 + OH686_17905 0.59 -0.4 3,732,450 + OH686_17905 0.59 +0.4 3,732,450 + OH686_17905 0.59 +0.8 3,732,450 + OH686_17905 0.59 +0.6 3,732,450 + OH686_17905 0.59 -0.5 3,732,450 + OH686_17905 0.59 +0.0 3,732,451 - OH686_17905 0.59 -0.5 3,732,451 - OH686_17905 0.59 -0.9 3,732,451 - OH686_17905 0.59 +0.8 3,732,451 - OH686_17905 0.59 -0.9 3,732,451 - OH686_17905 0.59 -0.4
Or see this region's nucleotide sequence