Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_14360 and OH686_14365 are separated by 45 nucleotides OH686_14365 and OH686_14370 overlap by 4 nucleotides OH686_14370 and OH686_14375 overlap by 4 nucleotides
OH686_14360: OH686_14360 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system, at 2,997,489 to 2,999,297
_14360
OH686_14365: OH686_14365 - dTDP-4-dehydrorhamnose reductase, at 2,999,343 to 3,000,209
_14365
OH686_14370: OH686_14370 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 3,000,206 to 3,000,751
_14370
OH686_14375: OH686_14375 - glucose-1-phosphate thymidylyltransferase, at 3,000,748 to 3,001,620
_14375
Position (kb)
2999
3000
3001 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.375 kb on + strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.376 kb on - strand, within OH686_14360 at 2998.716 kb on - strand, within OH686_14360 at 2998.810 kb on + strand, within OH686_14360 at 2998.810 kb on + strand, within OH686_14360 at 2998.811 kb on - strand, within OH686_14360 at 2998.811 kb on - strand, within OH686_14360 at 2998.882 kb on + strand, within OH686_14360 at 2998.882 kb on + strand, within OH686_14360 at 2998.891 kb on + strand, within OH686_14360 at 2998.891 kb on + strand, within OH686_14360 at 2998.891 kb on + strand, within OH686_14360 at 2998.891 kb on + strand, within OH686_14360 at 2998.892 kb on - strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.972 kb on + strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2998.973 kb on - strand, within OH686_14360 at 2999.111 kb on - strand, within OH686_14360 at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.143 kb on + strand at 2999.144 kb on - strand at 2999.144 kb on - strand at 2999.144 kb on - strand at 2999.144 kb on - strand at 2999.144 kb on - strand at 2999.144 kb on - strand at 2999.188 kb on + strand at 2999.189 kb on - strand at 2999.189 kb on - strand at 2999.189 kb on - strand at 2999.191 kb on + strand at 2999.191 kb on + strand at 2999.192 kb on - strand at 2999.192 kb on - strand at 2999.192 kb on - strand at 2999.192 kb on - strand at 2999.288 kb on + strand at 2999.288 kb on + strand at 2999.288 kb on + strand at 2999.288 kb on + strand at 2999.288 kb on + strand at 2999.289 kb on - strand at 2999.289 kb on - strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.299 kb on + strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.300 kb on - strand at 2999.327 kb on + strand at 2999.327 kb on + strand at 2999.327 kb on + strand at 2999.327 kb on + strand at 2999.328 kb on - strand at 2999.328 kb on - strand at 2999.328 kb on - strand at 2999.328 kb on - strand at 3000.720 kb on - strand at 3000.779 kb on + strand at 3000.779 kb on + strand at 3000.779 kb on + strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.780 kb on - strand at 3000.817 kb on + strand at 3000.818 kb on - strand at 3000.915 kb on - strand, within OH686_14375 at 3000.915 kb on - strand, within OH686_14375 at 3000.915 kb on - strand, within OH686_14375 at 3001.011 kb on - strand, within OH686_14375 at 3001.011 kb on - strand, within OH686_14375 at 3001.101 kb on - strand, within OH686_14375 at 3001.101 kb on - strand, within OH686_14375 at 3001.101 kb on - strand, within OH686_14375
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 2,998,375 + OH686_14360 0.49 -1.4 2,998,375 + OH686_14360 0.49 -0.6 2,998,375 + OH686_14360 0.49 -0.4 2,998,375 + OH686_14360 0.49 +0.5 2,998,375 + OH686_14360 0.49 -0.1 2,998,375 + OH686_14360 0.49 +0.3 2,998,375 + OH686_14360 0.49 -0.9 2,998,375 + OH686_14360 0.49 +0.0 2,998,375 + OH686_14360 0.49 +0.3 2,998,375 + OH686_14360 0.49 -0.4 2,998,376 - OH686_14360 0.49 +0.0 2,998,376 - OH686_14360 0.49 +0.0 2,998,376 - OH686_14360 0.49 +1.2 2,998,376 - OH686_14360 0.49 -0.2 2,998,376 - OH686_14360 0.49 -0.4 2,998,376 - OH686_14360 0.49 -0.5 2,998,376 - OH686_14360 0.49 +0.8 2,998,376 - OH686_14360 0.49 -0.4 2,998,376 - OH686_14360 0.49 -0.8 2,998,376 - OH686_14360 0.49 -0.4 2,998,376 - OH686_14360 0.49 -0.0 2,998,376 - OH686_14360 0.49 +0.2 2,998,376 - OH686_14360 0.49 -1.2 2,998,376 - OH686_14360 0.49 -0.2 2,998,716 - OH686_14360 0.68 +0.9 2,998,810 + OH686_14360 0.73 -0.5 2,998,810 + OH686_14360 0.73 -0.6 2,998,811 - OH686_14360 0.73 -0.3 2,998,811 - OH686_14360 0.73 +0.9 2,998,882 + OH686_14360 0.77 -1.1 2,998,882 + OH686_14360 0.77 +0.0 2,998,891 + OH686_14360 0.78 +0.3 2,998,891 + OH686_14360 0.78 -0.1 2,998,891 + OH686_14360 0.78 -0.5 2,998,891 + OH686_14360 0.78 -1.1 2,998,892 - OH686_14360 0.78 +0.1 2,998,972 + OH686_14360 0.82 -1.0 2,998,972 + OH686_14360 0.82 +0.0 2,998,972 + OH686_14360 0.82 -0.5 2,998,972 + OH686_14360 0.82 -0.4 2,998,972 + OH686_14360 0.82 +0.0 2,998,972 + OH686_14360 0.82 -0.2 2,998,972 + OH686_14360 0.82 -0.1 2,998,972 + OH686_14360 0.82 -1.0 2,998,972 + OH686_14360 0.82 -0.2 2,998,972 + OH686_14360 0.82 +1.1 2,998,972 + OH686_14360 0.82 -0.9 2,998,973 - OH686_14360 0.82 +0.5 2,998,973 - OH686_14360 0.82 +0.0 2,998,973 - OH686_14360 0.82 -0.1 2,998,973 - OH686_14360 0.82 -0.4 2,998,973 - OH686_14360 0.82 -0.3 2,998,973 - OH686_14360 0.82 -0.6 2,998,973 - OH686_14360 0.82 -0.6 2,999,111 - OH686_14360 0.90 -0.3 2,999,143 + -1.4 2,999,143 + +0.2 2,999,143 + +0.9 2,999,143 + +1.6 2,999,143 + -1.4 2,999,143 + -0.0 2,999,143 + +2.5 2,999,143 + -0.4 2,999,143 + -0.8 2,999,143 + -0.4 2,999,144 - -0.1 2,999,144 - -1.5 2,999,144 - +1.4 2,999,144 - +0.4 2,999,144 - -0.9 2,999,144 - -0.2 2,999,188 + +0.2 2,999,189 - +0.4 2,999,189 - +0.7 2,999,189 - +0.0 2,999,191 + -0.2 2,999,191 + +0.1 2,999,192 - -2.5 2,999,192 - +0.6 2,999,192 - -0.9 2,999,192 - -0.6 2,999,288 + +0.7 2,999,288 + -1.0 2,999,288 + +0.4 2,999,288 + -0.2 2,999,288 + -0.6 2,999,289 - +0.1 2,999,289 - -1.6 2,999,299 + +0.9 2,999,299 + -0.7 2,999,299 + -0.9 2,999,299 + -1.0 2,999,299 + -0.8 2,999,299 + +0.6 2,999,299 + -1.0 2,999,299 + -0.2 2,999,299 + +0.1 2,999,299 + -0.6 2,999,299 + +1.5 2,999,299 + +0.0 2,999,299 + -0.6 2,999,299 + -1.4 2,999,299 + +0.5 2,999,299 + +0.3 2,999,299 + +1.2 2,999,299 + -0.1 2,999,299 + +0.1 2,999,299 + +0.7 2,999,299 + +0.0 2,999,299 + -0.7 2,999,299 + +0.2 2,999,299 + -0.2 2,999,299 + +0.2 2,999,299 + -1.6 2,999,300 - +1.8 2,999,300 - +0.1 2,999,300 - -0.7 2,999,300 - -0.3 2,999,300 - -1.9 2,999,300 - +1.3 2,999,300 - -0.2 2,999,300 - -0.5 2,999,300 - -1.0 2,999,300 - +0.2 2,999,300 - -0.3 2,999,300 - +0.9 2,999,300 - -0.4 2,999,300 - +0.2 2,999,300 - -1.1 2,999,300 - +0.1 2,999,300 - -0.2 2,999,300 - -0.6 2,999,300 - +0.3 2,999,300 - +0.7 2,999,300 - -0.1 2,999,300 - +0.1 2,999,300 - -0.0 2,999,300 - +0.5 2,999,300 - -0.3 2,999,327 + -1.1 2,999,327 + +0.4 2,999,327 + -0.5 2,999,327 + -0.2 2,999,328 - -0.3 2,999,328 - -0.0 2,999,328 - -1.3 2,999,328 - +0.4 3,000,720 - -0.1 3,000,779 + +0.1 3,000,779 + -0.1 3,000,779 + +0.3 3,000,780 - -0.3 3,000,780 - +0.3 3,000,780 - +0.2 3,000,780 - -0.0 3,000,780 - +0.5 3,000,780 - +0.5 3,000,780 - -1.4 3,000,817 + -0.1 3,000,818 - -0.8 3,000,915 - OH686_14375 0.19 -0.1 3,000,915 - OH686_14375 0.19 -0.4 3,000,915 - OH686_14375 0.19 +0.9 3,001,011 - OH686_14375 0.30 -0.1 3,001,011 - OH686_14375 0.30 +1.2 3,001,101 - OH686_14375 0.40 +1.6 3,001,101 - OH686_14375 0.40 +0.9 3,001,101 - OH686_14375 0.40 +1.3
Or see this region's nucleotide sequence