Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_09570 and OH686_09575 are separated by 60 nucleotides OH686_09575 and OH686_09580 are separated by 44 nucleotides
OH686_09570: OH686_09570 - 3-deoxy-D-manno-octulosonic acid transferase , at 1,955,921 to 1,957,195
_09570
OH686_09575: OH686_09575 - small multidrug resistance family (SMR) protein, at 1,957,256 to 1,957,588
_09575
OH686_09580: OH686_09580 - Oxidoreductase, FAD-binding, at 1,957,633 to 1,958,808
_09580
Position (kb)
1957
1958 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1957.208 kb on + strand at 1957.208 kb on + strand at 1957.208 kb on + strand at 1957.209 kb on - strand at 1957.209 kb on - strand at 1957.209 kb on - strand at 1957.265 kb on + strand at 1957.271 kb on + strand at 1957.271 kb on + strand at 1957.271 kb on + strand at 1957.271 kb on + strand at 1957.272 kb on - strand at 1957.272 kb on - strand at 1957.272 kb on - strand at 1957.272 kb on - strand at 1957.373 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.433 kb on + strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.434 kb on - strand, within OH686_09575 at 1957.486 kb on + strand, within OH686_09575 at 1957.486 kb on + strand, within OH686_09575 at 1957.487 kb on - strand, within OH686_09575 at 1957.487 kb on - strand, within OH686_09575 at 1957.487 kb on - strand, within OH686_09575 at 1957.487 kb on - strand, within OH686_09575 at 1957.490 kb on + strand, within OH686_09575 at 1957.490 kb on + strand, within OH686_09575 at 1957.490 kb on + strand, within OH686_09575 at 1957.491 kb on - strand, within OH686_09575 at 1957.491 kb on - strand, within OH686_09575 at 1957.599 kb on + strand at 1957.599 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.601 kb on + strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand at 1957.602 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 1,957,208 + -0.5 1,957,208 + +0.5 1,957,208 + -0.1 1,957,209 - -2.8 1,957,209 - -2.5 1,957,209 - -0.6 1,957,265 + +0.8 1,957,271 + -1.6 1,957,271 + -0.4 1,957,271 + +0.5 1,957,271 + +0.3 1,957,272 - +0.4 1,957,272 - +0.2 1,957,272 - -0.4 1,957,272 - +2.0 1,957,373 + OH686_09575 0.35 -0.7 1,957,433 + OH686_09575 0.53 -0.3 1,957,433 + OH686_09575 0.53 -0.2 1,957,433 + OH686_09575 0.53 +0.7 1,957,433 + OH686_09575 0.53 +0.2 1,957,433 + OH686_09575 0.53 +0.5 1,957,433 + OH686_09575 0.53 +0.0 1,957,433 + OH686_09575 0.53 -0.2 1,957,433 + OH686_09575 0.53 +0.4 1,957,433 + OH686_09575 0.53 -1.0 1,957,433 + OH686_09575 0.53 +0.6 1,957,433 + OH686_09575 0.53 +0.6 1,957,434 - OH686_09575 0.53 +0.4 1,957,434 - OH686_09575 0.53 -0.7 1,957,434 - OH686_09575 0.53 +0.2 1,957,434 - OH686_09575 0.53 -0.3 1,957,434 - OH686_09575 0.53 -0.4 1,957,434 - OH686_09575 0.53 -1.0 1,957,434 - OH686_09575 0.53 +0.2 1,957,486 + OH686_09575 0.69 +1.1 1,957,486 + OH686_09575 0.69 +0.4 1,957,487 - OH686_09575 0.69 +0.9 1,957,487 - OH686_09575 0.69 -0.9 1,957,487 - OH686_09575 0.69 +0.0 1,957,487 - OH686_09575 0.69 -0.4 1,957,490 + OH686_09575 0.70 +0.4 1,957,490 + OH686_09575 0.70 -0.8 1,957,490 + OH686_09575 0.70 +0.1 1,957,491 - OH686_09575 0.71 +0.2 1,957,491 - OH686_09575 0.71 -1.4 1,957,599 + +0.2 1,957,599 + -1.1 1,957,601 + +0.5 1,957,601 + +0.2 1,957,601 + -1.5 1,957,601 + -0.4 1,957,601 + -0.8 1,957,601 + +0.0 1,957,601 + -1.4 1,957,601 + +0.1 1,957,601 + +0.9 1,957,601 + -0.4 1,957,602 - -0.9 1,957,602 - +1.3 1,957,602 - +0.1 1,957,602 - -0.9 1,957,602 - -0.6 1,957,602 - -1.4 1,957,602 - +0.0 1,957,602 - -0.1
Or see this region's nucleotide sequence