Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_09175 and OH686_09180 are separated by 207 nucleotides
OH686_09175: OH686_09175 - CDS, at 1,872,811 to 1,873,821
_09175
OH686_09180: OH686_09180 - Two-component system sensor histidine kinase, at 1,874,029 to 1,876,440
_09180
Position (kb)
1872
1873
1874 Strain fitness (log2 ratio)
-2
-1
0
1 at 1871.832 kb on - strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.853 kb on + strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.854 kb on - strand at 1871.866 kb on + strand at 1871.866 kb on + strand at 1871.866 kb on + strand at 1871.866 kb on + strand at 1871.866 kb on + strand at 1871.867 kb on - strand at 1871.867 kb on - strand at 1871.867 kb on - strand at 1871.899 kb on + strand at 1871.899 kb on + strand at 1871.899 kb on + strand at 1871.899 kb on + strand at 1871.900 kb on - strand at 1871.911 kb on + strand at 1871.912 kb on - strand at 1871.912 kb on - strand at 1871.912 kb on - strand at 1871.912 kb on - strand at 1871.912 kb on - strand at 1871.912 kb on - strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.945 kb on + strand at 1871.946 kb on - strand at 1871.946 kb on - strand at 1871.946 kb on - strand at 1871.946 kb on - strand at 1871.946 kb on - strand at 1871.972 kb on + strand at 1871.972 kb on + strand at 1871.972 kb on + strand at 1871.973 kb on - strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.991 kb on + strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1871.992 kb on - strand at 1872.001 kb on + strand at 1872.001 kb on + strand at 1872.001 kb on + strand at 1872.001 kb on + strand at 1872.001 kb on + strand at 1872.002 kb on - strand at 1872.002 kb on - strand at 1872.002 kb on - strand at 1872.002 kb on - strand at 1872.002 kb on - strand at 1872.002 kb on - strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.006 kb on + strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.007 kb on - strand at 1872.041 kb on + strand at 1872.042 kb on - strand at 1872.047 kb on + strand at 1872.050 kb on + strand at 1872.051 kb on - strand at 1872.051 kb on - strand at 1872.091 kb on + strand at 1872.092 kb on - strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.104 kb on + strand at 1872.105 kb on - strand at 1872.105 kb on - strand at 1872.105 kb on - strand at 1872.105 kb on - strand at 1872.105 kb on - strand at 1872.105 kb on - strand at 1872.109 kb on + strand at 1872.109 kb on + strand at 1872.109 kb on + strand at 1872.109 kb on + strand at 1872.109 kb on + strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.110 kb on - strand at 1872.112 kb on + strand at 1872.112 kb on + strand at 1872.112 kb on + strand at 1872.113 kb on - strand at 1872.113 kb on - strand at 1872.113 kb on - strand at 1872.160 kb on + strand at 1872.160 kb on + strand at 1872.160 kb on + strand at 1872.161 kb on - strand at 1872.161 kb on - strand at 1872.164 kb on + strand at 1872.164 kb on + strand at 1872.165 kb on - strand at 1872.165 kb on - strand at 1872.165 kb on - strand at 1872.279 kb on + strand at 1872.280 kb on - strand at 1872.332 kb on + strand at 1872.332 kb on + strand at 1872.332 kb on + strand at 1872.333 kb on - strand at 1872.466 kb on + strand at 1872.466 kb on + strand at 1872.467 kb on - strand at 1872.494 kb on - strand at 1872.511 kb on - strand at 1872.663 kb on + strand at 1872.677 kb on - strand at 1872.777 kb on + strand at 1872.781 kb on + strand at 1872.856 kb on - strand at 1872.923 kb on + strand, within OH686_09175 at 1872.926 kb on + strand, within OH686_09175 at 1872.927 kb on - strand, within OH686_09175 at 1872.950 kb on + strand, within OH686_09175 at 1872.950 kb on + strand, within OH686_09175 at 1872.950 kb on + strand, within OH686_09175 at 1872.951 kb on - strand, within OH686_09175 at 1872.951 kb on - strand, within OH686_09175 at 1872.951 kb on - strand, within OH686_09175 at 1873.006 kb on + strand, within OH686_09175 at 1873.070 kb on + strand, within OH686_09175 at 1873.070 kb on + strand, within OH686_09175 at 1873.070 kb on + strand, within OH686_09175 at 1873.070 kb on + strand, within OH686_09175 at 1873.071 kb on - strand, within OH686_09175 at 1873.100 kb on + strand, within OH686_09175 at 1873.101 kb on - strand, within OH686_09175 at 1873.143 kb on + strand, within OH686_09175 at 1873.143 kb on + strand, within OH686_09175 at 1873.144 kb on - strand, within OH686_09175 at 1873.144 kb on - strand, within OH686_09175 at 1873.147 kb on + strand, within OH686_09175 at 1873.148 kb on - strand, within OH686_09175 at 1873.148 kb on - strand, within OH686_09175 at 1873.148 kb on - strand, within OH686_09175 at 1873.172 kb on - strand, within OH686_09175 at 1873.210 kb on - strand, within OH686_09175 at 1873.220 kb on - strand, within OH686_09175 at 1873.260 kb on + strand, within OH686_09175 at 1873.312 kb on + strand, within OH686_09175 at 1873.445 kb on + strand, within OH686_09175 at 1873.450 kb on - strand, within OH686_09175 at 1873.455 kb on - strand, within OH686_09175 at 1873.550 kb on + strand, within OH686_09175 at 1873.702 kb on + strand, within OH686_09175 at 1873.702 kb on + strand, within OH686_09175 at 1873.703 kb on - strand, within OH686_09175 at 1873.703 kb on - strand, within OH686_09175 at 1873.737 kb on + strand at 1873.771 kb on + strand at 1873.771 kb on + strand at 1873.771 kb on + strand at 1873.776 kb on - strand at 1873.804 kb on + strand at 1873.804 kb on + strand at 1873.804 kb on + strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.805 kb on - strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.810 kb on + strand at 1873.811 kb on - strand at 1873.811 kb on - strand at 1873.811 kb on - strand at 1873.811 kb on - strand at 1873.811 kb on - strand at 1873.811 kb on - strand at 1873.833 kb on + strand at 1873.895 kb on - strand at 1873.917 kb on + strand at 1873.972 kb on + strand at 1873.973 kb on - strand at 1873.973 kb on - strand at 1873.983 kb on + strand at 1873.983 kb on + strand at 1873.984 kb on - strand at 1873.996 kb on + strand at 1873.996 kb on + strand at 1874.053 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.108 kb on + strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.109 kb on - strand at 1874.645 kb on + strand, within OH686_09180 at 1874.646 kb on - strand, within OH686_09180 at 1874.795 kb on + strand, within OH686_09180 at 1874.795 kb on + strand, within OH686_09180 at 1874.796 kb on - strand, within OH686_09180 at 1874.796 kb on - strand, within OH686_09180
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 1,871,832 - -0.1 1,871,853 + +0.4 1,871,853 + +0.0 1,871,853 + -0.2 1,871,853 + +0.3 1,871,853 + +0.7 1,871,853 + +0.7 1,871,853 + -0.3 1,871,853 + -0.4 1,871,853 + -0.5 1,871,853 + +0.2 1,871,853 + -0.4 1,871,854 - +0.0 1,871,854 - -1.4 1,871,854 - +0.2 1,871,854 - -0.3 1,871,854 - +0.6 1,871,854 - +0.3 1,871,854 - +0.5 1,871,854 - +0.3 1,871,866 + +0.4 1,871,866 + +0.7 1,871,866 + -0.3 1,871,866 + +0.1 1,871,866 + -0.1 1,871,867 - -0.1 1,871,867 - +0.4 1,871,867 - -0.2 1,871,899 + +0.3 1,871,899 + +0.1 1,871,899 + -0.2 1,871,899 + +0.6 1,871,900 - -0.1 1,871,911 + -0.1 1,871,912 - +1.6 1,871,912 - -0.2 1,871,912 - -0.1 1,871,912 - +0.2 1,871,912 - +0.0 1,871,912 - +0.7 1,871,945 + -0.0 1,871,945 + -0.4 1,871,945 + +0.9 1,871,945 + -0.8 1,871,945 + -0.6 1,871,945 + -0.3 1,871,945 + +0.4 1,871,945 + +0.1 1,871,946 - +0.5 1,871,946 - +1.7 1,871,946 - +0.6 1,871,946 - +0.4 1,871,946 - -0.0 1,871,972 + -0.6 1,871,972 + -0.3 1,871,972 + +1.1 1,871,973 - +0.1 1,871,991 + +0.5 1,871,991 + -0.5 1,871,991 + -0.1 1,871,991 + +0.1 1,871,991 + +0.1 1,871,991 + -0.6 1,871,991 + -1.6 1,871,991 + +0.3 1,871,991 + +0.1 1,871,991 + +0.5 1,871,991 + +0.1 1,871,991 + -0.0 1,871,991 + -1.0 1,871,992 - -0.3 1,871,992 - -1.0 1,871,992 - -0.2 1,871,992 - +0.8 1,871,992 - -0.6 1,871,992 - +1.1 1,871,992 - +0.2 1,871,992 - +0.7 1,871,992 - +0.6 1,871,992 - +0.1 1,871,992 - +0.3 1,871,992 - +0.2 1,871,992 - +0.3 1,871,992 - -0.9 1,871,992 - -0.1 1,871,992 - -0.1 1,872,001 + +0.4 1,872,001 + -0.3 1,872,001 + +0.8 1,872,001 + +0.3 1,872,001 + +0.0 1,872,002 - -0.8 1,872,002 - -1.6 1,872,002 - +0.0 1,872,002 - +0.8 1,872,002 - -1.9 1,872,002 - +0.2 1,872,006 + -0.4 1,872,006 + +0.0 1,872,006 + -0.3 1,872,006 + -0.2 1,872,006 + -0.1 1,872,006 + -0.8 1,872,006 + +0.1 1,872,006 + +0.4 1,872,006 + +1.0 1,872,006 + +0.4 1,872,006 + +0.1 1,872,007 - +0.6 1,872,007 - +0.4 1,872,007 - -0.7 1,872,007 - -0.3 1,872,007 - +0.0 1,872,007 - -0.0 1,872,007 - -0.5 1,872,041 + -0.2 1,872,042 - -0.0 1,872,047 + -0.6 1,872,050 + +0.7 1,872,051 - -0.5 1,872,051 - -0.2 1,872,091 + -0.9 1,872,092 - +0.5 1,872,104 + +0.2 1,872,104 + -0.4 1,872,104 + -0.5 1,872,104 + -0.3 1,872,104 + -0.2 1,872,104 + +0.5 1,872,104 + +0.3 1,872,104 + +0.3 1,872,104 + -0.2 1,872,104 + -0.2 1,872,105 - +0.1 1,872,105 - -0.1 1,872,105 - +0.8 1,872,105 - -0.4 1,872,105 - +0.0 1,872,105 - -0.0 1,872,109 + -0.1 1,872,109 + +0.1 1,872,109 + -0.9 1,872,109 + -0.1 1,872,109 + +0.0 1,872,110 - +0.8 1,872,110 - -0.8 1,872,110 - -0.6 1,872,110 - -0.0 1,872,110 - +0.1 1,872,110 - +0.5 1,872,110 - +0.3 1,872,112 + +0.5 1,872,112 + -0.4 1,872,112 + +0.3 1,872,113 - -2.2 1,872,113 - -0.4 1,872,113 - -1.8 1,872,160 + +0.3 1,872,160 + -0.3 1,872,160 + -0.3 1,872,161 - -0.6 1,872,161 - -0.4 1,872,164 + +0.1 1,872,164 + -0.2 1,872,165 - -0.1 1,872,165 - +0.4 1,872,165 - -1.6 1,872,279 + +0.4 1,872,280 - -0.1 1,872,332 + -0.1 1,872,332 + +0.4 1,872,332 + +0.5 1,872,333 - +0.1 1,872,466 + +0.0 1,872,466 + -0.8 1,872,467 - -0.3 1,872,494 - +0.6 1,872,511 - -0.5 1,872,663 + -0.1 1,872,677 - -0.8 1,872,777 + +0.2 1,872,781 + +1.4 1,872,856 - -0.3 1,872,923 + OH686_09175 0.11 -0.9 1,872,926 + OH686_09175 0.11 +0.1 1,872,927 - OH686_09175 0.11 +0.2 1,872,950 + OH686_09175 0.14 +0.1 1,872,950 + OH686_09175 0.14 +0.4 1,872,950 + OH686_09175 0.14 -0.4 1,872,951 - OH686_09175 0.14 +0.2 1,872,951 - OH686_09175 0.14 -0.0 1,872,951 - OH686_09175 0.14 -0.5 1,873,006 + OH686_09175 0.19 +0.1 1,873,070 + OH686_09175 0.26 +0.2 1,873,070 + OH686_09175 0.26 +0.3 1,873,070 + OH686_09175 0.26 -0.8 1,873,070 + OH686_09175 0.26 +0.1 1,873,071 - OH686_09175 0.26 +0.4 1,873,100 + OH686_09175 0.29 -0.2 1,873,101 - OH686_09175 0.29 -0.3 1,873,143 + OH686_09175 0.33 -0.9 1,873,143 + OH686_09175 0.33 -0.1 1,873,144 - OH686_09175 0.33 +0.1 1,873,144 - OH686_09175 0.33 -1.4 1,873,147 + OH686_09175 0.33 -0.4 1,873,148 - OH686_09175 0.33 +0.5 1,873,148 - OH686_09175 0.33 +0.6 1,873,148 - OH686_09175 0.33 -0.4 1,873,172 - OH686_09175 0.36 -0.4 1,873,210 - OH686_09175 0.39 +0.4 1,873,220 - OH686_09175 0.40 +0.7 1,873,260 + OH686_09175 0.44 -0.0 1,873,312 + OH686_09175 0.50 -0.9 1,873,445 + OH686_09175 0.63 -0.5 1,873,450 - OH686_09175 0.63 -1.7 1,873,455 - OH686_09175 0.64 +0.1 1,873,550 + OH686_09175 0.73 -0.5 1,873,702 + OH686_09175 0.88 +0.2 1,873,702 + OH686_09175 0.88 +0.1 1,873,703 - OH686_09175 0.88 +0.1 1,873,703 - OH686_09175 0.88 -0.8 1,873,737 + +0.2 1,873,771 + +0.1 1,873,771 + +0.2 1,873,771 + -0.4 1,873,776 - +0.2 1,873,804 + -0.1 1,873,804 + -0.2 1,873,804 + +0.4 1,873,805 - +0.8 1,873,805 - -0.1 1,873,805 - +0.4 1,873,805 - +0.2 1,873,805 - -1.2 1,873,805 - +0.6 1,873,805 - +0.2 1,873,805 - -1.7 1,873,810 + -0.4 1,873,810 + +0.7 1,873,810 + +0.2 1,873,810 + -0.1 1,873,810 + -1.4 1,873,810 + -1.6 1,873,810 + -0.1 1,873,810 + -0.3 1,873,810 + -0.3 1,873,810 + -0.2 1,873,810 + +0.4 1,873,811 - +0.6 1,873,811 - -0.0 1,873,811 - -1.3 1,873,811 - +0.9 1,873,811 - -0.3 1,873,811 - -1.4 1,873,833 + +0.3 1,873,895 - +0.3 1,873,917 + -0.4 1,873,972 + +0.2 1,873,973 - +0.1 1,873,973 - -0.8 1,873,983 + -0.4 1,873,983 + +0.2 1,873,984 - +0.9 1,873,996 + +1.2 1,873,996 + +0.7 1,874,053 + +0.6 1,874,108 + +0.4 1,874,108 + +0.5 1,874,108 + +0.7 1,874,108 + +0.2 1,874,108 + +0.8 1,874,108 + +0.4 1,874,108 + +0.4 1,874,108 + +0.4 1,874,108 + +0.8 1,874,108 + -0.0 1,874,108 + +0.3 1,874,108 + +0.7 1,874,108 + +0.3 1,874,109 - +0.2 1,874,109 - +0.5 1,874,109 - +0.4 1,874,109 - +0.3 1,874,109 - +0.2 1,874,109 - +0.3 1,874,109 - +0.4 1,874,109 - +0.5 1,874,109 - +0.1 1,874,645 + OH686_09180 0.26 +0.7 1,874,646 - OH686_09180 0.26 -0.1 1,874,795 + OH686_09180 0.32 +0.3 1,874,795 + OH686_09180 0.32 -0.3 1,874,796 - OH686_09180 0.32 +0.3 1,874,796 - OH686_09180 0.32 -0.1
Or see this region's nucleotide sequence