Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04725 and OH686_04730 are separated by 85 nucleotides OH686_04730 and OH686_04735 overlap by 4 nucleotides OH686_04735 and OH686_04740 overlap by 16 nucleotides OH686_04740 and OH686_04745 overlap by 4 nucleotides
OH686_04725: OH686_04725 - Permease of the drug/metabolite transporter (DMT) superfamily, at 975,459 to 976,364
_04725
OH686_04730: OH686_04730 - Na(+) H(+) antiporter subunit G, at 976,450 to 976,782
_04730
OH686_04735: OH686_04735 - Na(+) H(+) antiporter subunit F, at 976,779 to 977,048
_04735
OH686_04740: OH686_04740 - Na(+) H(+) antiporter subunit E, at 977,033 to 977,530
_04740
OH686_04745: OH686_04745 - Na(+) H(+) antiporter subunit D, at 977,527 to 979,014
_04745
Position (kb) 977
978 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 976.067 kb on + strand, within OH686_04725 at 976.115 kb on + strand, within OH686_04725 at 976.115 kb on + strand, within OH686_04725 at 976.115 kb on + strand, within OH686_04725 at 976.115 kb on + strand, within OH686_04725 at 976.116 kb on - strand, within OH686_04725 at 976.116 kb on - strand, within OH686_04725 at 976.120 kb on + strand, within OH686_04725 at 976.120 kb on + strand, within OH686_04725 at 976.121 kb on - strand, within OH686_04725 at 976.371 kb on + strand at 976.371 kb on + strand at 976.372 kb on - strand at 976.372 kb on - strand at 976.395 kb on + strand at 976.395 kb on + strand at 976.395 kb on + strand at 976.395 kb on + strand at 976.396 kb on - strand at 976.396 kb on - strand at 976.396 kb on - strand at 976.451 kb on + strand at 976.452 kb on - strand at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.807 kb on + strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 976.808 kb on - strand, within OH686_04735 at 977.054 kb on + strand at 977.054 kb on + strand at 977.054 kb on + strand at 977.054 kb on + strand at 977.055 kb on - strand at 977.055 kb on - strand at 977.055 kb on - strand at 977.055 kb on - strand at 977.601 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 976,067 + OH686_04725 0.67 +1.5 976,115 + OH686_04725 0.72 -0.4 976,115 + OH686_04725 0.72 +1.1 976,115 + OH686_04725 0.72 +0.6 976,115 + OH686_04725 0.72 -0.5 976,116 - OH686_04725 0.73 +0.6 976,116 - OH686_04725 0.73 -0.4 976,120 + OH686_04725 0.73 +0.4 976,120 + OH686_04725 0.73 +0.6 976,121 - OH686_04725 0.73 +0.0 976,371 + +0.4 976,371 + -0.4 976,372 - -1.7 976,372 - -0.0 976,395 + -0.3 976,395 + -0.6 976,395 + +0.9 976,395 + +0.1 976,396 - +0.1 976,396 - +0.3 976,396 - -0.0 976,451 + -0.1 976,452 - +0.4 976,807 + OH686_04735 0.10 -1.2 976,807 + OH686_04735 0.10 -1.1 976,807 + OH686_04735 0.10 +0.7 976,807 + OH686_04735 0.10 -2.2 976,807 + OH686_04735 0.10 -0.5 976,807 + OH686_04735 0.10 +0.3 976,807 + OH686_04735 0.10 -0.8 976,807 + OH686_04735 0.10 -0.4 976,807 + OH686_04735 0.10 -0.5 976,807 + OH686_04735 0.10 -0.1 976,807 + OH686_04735 0.10 -0.2 976,807 + OH686_04735 0.10 -1.2 976,807 + OH686_04735 0.10 -0.8 976,807 + OH686_04735 0.10 -3.0 976,807 + OH686_04735 0.10 -0.5 976,807 + OH686_04735 0.10 -0.4 976,807 + OH686_04735 0.10 -0.4 976,807 + OH686_04735 0.10 -2.8 976,807 + OH686_04735 0.10 -0.8 976,807 + OH686_04735 0.10 +0.9 976,807 + OH686_04735 0.10 -1.1 976,807 + OH686_04735 0.10 -1.5 976,807 + OH686_04735 0.10 +0.1 976,807 + OH686_04735 0.10 -0.7 976,808 - OH686_04735 0.11 -0.9 976,808 - OH686_04735 0.11 -1.8 976,808 - OH686_04735 0.11 -1.2 976,808 - OH686_04735 0.11 -1.4 976,808 - OH686_04735 0.11 -0.3 976,808 - OH686_04735 0.11 -1.8 976,808 - OH686_04735 0.11 +0.4 976,808 - OH686_04735 0.11 +0.6 976,808 - OH686_04735 0.11 -0.1 976,808 - OH686_04735 0.11 -1.7 976,808 - OH686_04735 0.11 -0.3 976,808 - OH686_04735 0.11 -2.0 976,808 - OH686_04735 0.11 -0.2 976,808 - OH686_04735 0.11 +0.4 976,808 - OH686_04735 0.11 -1.2 976,808 - OH686_04735 0.11 -0.4 976,808 - OH686_04735 0.11 +0.4 976,808 - OH686_04735 0.11 -1.4 976,808 - OH686_04735 0.11 +0.9 977,054 + -0.7 977,054 + +1.9 977,054 + -1.3 977,054 + -0.8 977,055 - -0.4 977,055 - -0.5 977,055 - -0.7 977,055 - -1.0 977,601 - -1.4
Or see this region's nucleotide sequence