Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01385 and OH686_01390 are separated by 584 nucleotides OH686_01390 and OH686_01395 overlap by 4 nucleotides OH686_01395 and OH686_01400 are separated by 8 nucleotides OH686_01400 and OH686_01405 are separated by 43 nucleotides
OH686_01385: OH686_01385 - hypothetical protein, at 308,393 to 308,800
_01385
OH686_01390: OH686_01390 - hypothetical protein' product='hypothetical protein, at 309,385 to 309,621
_01390
OH686_01395: OH686_01395 - hypothetical protein' product='hypothetical protein, at 309,618 to 310,016
_01395
OH686_01400: OH686_01400 - hypothetical protein' product='hypothetical protein, at 310,025 to 310,537
_01400
OH686_01405: OH686_01405 - hypothetical protein, at 310,581 to 310,985
_01405
Position (kb) 309
310 Strain fitness (log2 ratio) -2
-1
0
1 at 308.435 kb on + strand, within OH686_01385 at 308.435 kb on + strand, within OH686_01385 at 308.706 kb on + strand, within OH686_01385 at 308.706 kb on + strand, within OH686_01385 at 308.717 kb on + strand, within OH686_01385 at 308.718 kb on - strand, within OH686_01385 at 308.763 kb on + strand at 308.801 kb on + strand at 308.801 kb on + strand at 308.802 kb on - strand at 308.802 kb on - strand at 308.883 kb on + strand at 308.883 kb on + strand at 308.883 kb on + strand at 308.884 kb on - strand at 308.888 kb on - strand at 308.888 kb on - strand at 308.897 kb on - strand at 308.897 kb on - strand at 308.965 kb on + strand at 309.014 kb on + strand at 309.035 kb on + strand at 309.036 kb on - strand at 309.038 kb on - strand at 309.039 kb on + strand at 309.040 kb on - strand at 309.062 kb on - strand at 309.064 kb on - strand at 309.066 kb on - strand at 309.086 kb on + strand at 309.086 kb on + strand at 309.087 kb on - strand at 309.182 kb on - strand at 309.234 kb on + strand at 309.240 kb on + strand at 309.240 kb on + strand at 309.266 kb on + strand at 309.313 kb on - strand at 309.369 kb on + strand at 309.369 kb on + strand at 309.372 kb on - strand at 309.547 kb on + strand, within OH686_01390 at 309.551 kb on + strand, within OH686_01390 at 309.552 kb on - strand, within OH686_01390 at 309.558 kb on + strand, within OH686_01390 at 309.739 kb on + strand, within OH686_01395 at 309.740 kb on - strand, within OH686_01395 at 309.830 kb on + strand, within OH686_01395 at 309.840 kb on + strand, within OH686_01395 at 309.842 kb on + strand, within OH686_01395 at 309.854 kb on + strand, within OH686_01395 at 309.899 kb on - strand, within OH686_01395 at 310.020 kb on + strand at 310.021 kb on - strand at 310.134 kb on + strand, within OH686_01400 at 310.221 kb on + strand, within OH686_01400 at 310.293 kb on - strand, within OH686_01400 at 310.406 kb on - strand, within OH686_01400 at 310.446 kb on - strand, within OH686_01400 at 310.535 kb on + strand at 310.536 kb on - strand at 310.605 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 308,435 + OH686_01385 0.10 +0.3 308,435 + OH686_01385 0.10 -0.8 308,706 + OH686_01385 0.77 -0.2 308,706 + OH686_01385 0.77 +0.5 308,717 + OH686_01385 0.79 -0.0 308,718 - OH686_01385 0.80 -1.1 308,763 + -0.2 308,801 + -0.5 308,801 + -0.2 308,802 - -0.4 308,802 - +1.5 308,883 + +0.2 308,883 + -0.1 308,883 + +0.2 308,884 - +1.0 308,888 - +0.8 308,888 - +0.4 308,897 - +0.2 308,897 - -0.1 308,965 + +0.1 309,014 + +0.6 309,035 + -1.0 309,036 - -0.5 309,038 - +1.3 309,039 + -0.0 309,040 - -1.0 309,062 - -0.4 309,064 - +0.5 309,066 - +0.1 309,086 + +0.3 309,086 + -0.0 309,087 - -0.2 309,182 - +0.1 309,234 + +0.2 309,240 + -0.5 309,240 + -0.5 309,266 + -0.0 309,313 - -1.8 309,369 + +0.5 309,369 + +0.1 309,372 - -0.3 309,547 + OH686_01390 0.68 -0.9 309,551 + OH686_01390 0.70 -0.4 309,552 - OH686_01390 0.70 +0.1 309,558 + OH686_01390 0.73 -0.7 309,739 + OH686_01395 0.30 -0.1 309,740 - OH686_01395 0.31 -0.2 309,830 + OH686_01395 0.53 -0.4 309,840 + OH686_01395 0.56 +0.1 309,842 + OH686_01395 0.56 -0.1 309,854 + OH686_01395 0.59 +0.3 309,899 - OH686_01395 0.70 -1.7 310,020 + +0.3 310,021 - -0.1 310,134 + OH686_01400 0.21 -0.7 310,221 + OH686_01400 0.38 -0.2 310,293 - OH686_01400 0.52 +0.1 310,406 - OH686_01400 0.74 +0.8 310,446 - OH686_01400 0.82 +0.1 310,535 + +0.7 310,536 - -0.7 310,605 + +0.4
Or see this region's nucleotide sequence