Strain Fitness in Bosea sp. OAE506 around ABIE41_RS23850

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS23845 and ABIE41_RS23850 are separated by 137 nucleotidesABIE41_RS23850 and ABIE41_RS23855 are separated by 162 nucleotidesABIE41_RS23855 and ABIE41_RS23860 are separated by 10 nucleotides ABIE41_RS23845: ABIE41_RS23845 - tetratricopeptide repeat protein, at 4,920,829 to 4,923,600 _RS23845 ABIE41_RS23850: ABIE41_RS23850 - LysE family translocator, at 4,923,738 to 4,924,370 _RS23850 ABIE41_RS23855: ABIE41_RS23855 - GNAT family acetyltransferase, at 4,924,533 to 4,925,039 _RS23855 ABIE41_RS23860: ABIE41_RS23860 - DinB family protein, at 4,925,050 to 4,925,556 _RS23860 Position (kb) 4923 4924 4925Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4922.802 kb on - strand, within ABIE41_RS23845at 4922.802 kb on - strand, within ABIE41_RS23845at 4922.955 kb on - strand, within ABIE41_RS23845at 4922.991 kb on + strand, within ABIE41_RS23845at 4922.991 kb on + strand, within ABIE41_RS23845at 4922.991 kb on + strand, within ABIE41_RS23845at 4922.992 kb on - strand, within ABIE41_RS23845at 4922.992 kb on - strand, within ABIE41_RS23845at 4922.992 kb on - strand, within ABIE41_RS23845at 4922.992 kb on - strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.090 kb on + strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.091 kb on - strand, within ABIE41_RS23845at 4923.092 kb on + strand, within ABIE41_RS23845at 4923.092 kb on + strand, within ABIE41_RS23845at 4923.092 kb on + strand, within ABIE41_RS23845at 4923.197 kb on + strand, within ABIE41_RS23845at 4923.198 kb on - strand, within ABIE41_RS23845at 4923.198 kb on - strand, within ABIE41_RS23845at 4923.299 kb on + strand, within ABIE41_RS23845at 4923.341 kb on + strandat 4923.341 kb on + strandat 4923.341 kb on + strandat 4923.342 kb on - strandat 4923.342 kb on - strandat 4923.342 kb on - strandat 4923.342 kb on - strandat 4923.380 kb on + strandat 4923.380 kb on + strandat 4923.381 kb on - strandat 4923.648 kb on + strandat 4923.648 kb on + strandat 4923.649 kb on - strandat 4923.649 kb on - strandat 4923.739 kb on + strandat 4923.979 kb on + strand, within ABIE41_RS23850at 4923.979 kb on + strand, within ABIE41_RS23850at 4923.980 kb on - strand, within ABIE41_RS23850at 4923.980 kb on - strand, within ABIE41_RS23850at 4923.980 kb on - strand, within ABIE41_RS23850at 4924.123 kb on + strand, within ABIE41_RS23850at 4924.124 kb on - strand, within ABIE41_RS23850at 4924.124 kb on - strand, within ABIE41_RS23850at 4924.124 kb on - strand, within ABIE41_RS23850at 4924.154 kb on - strand, within ABIE41_RS23850at 4924.210 kb on + strand, within ABIE41_RS23850at 4924.210 kb on + strand, within ABIE41_RS23850at 4924.210 kb on + strand, within ABIE41_RS23850at 4924.211 kb on - strand, within ABIE41_RS23850at 4924.211 kb on - strand, within ABIE41_RS23850at 4924.211 kb on - strand, within ABIE41_RS23850at 4924.211 kb on - strand, within ABIE41_RS23850at 4924.291 kb on + strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.292 kb on - strand, within ABIE41_RS23850at 4924.557 kb on + strandat 4924.558 kb on - strandat 4924.558 kb on - strandat 4924.885 kb on - strand, within ABIE41_RS23855

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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4,922,802 - ABIE41_RS23845 0.71 +0.3
4,922,802 - ABIE41_RS23845 0.71 -0.1
4,922,955 - ABIE41_RS23845 0.77 -1.7
4,922,991 + ABIE41_RS23845 0.78 +0.3
4,922,991 + ABIE41_RS23845 0.78 +0.0
4,922,991 + ABIE41_RS23845 0.78 -1.1
4,922,992 - ABIE41_RS23845 0.78 -0.5
4,922,992 - ABIE41_RS23845 0.78 +0.4
4,922,992 - ABIE41_RS23845 0.78 -1.0
4,922,992 - ABIE41_RS23845 0.78 +0.1
4,923,090 + ABIE41_RS23845 0.82 -0.8
4,923,090 + ABIE41_RS23845 0.82 -0.4
4,923,090 + ABIE41_RS23845 0.82 +0.6
4,923,090 + ABIE41_RS23845 0.82 +1.0
4,923,090 + ABIE41_RS23845 0.82 -0.2
4,923,090 + ABIE41_RS23845 0.82 -1.3
4,923,090 + ABIE41_RS23845 0.82 -2.8
4,923,090 + ABIE41_RS23845 0.82 -0.4
4,923,090 + ABIE41_RS23845 0.82 -1.3
4,923,090 + ABIE41_RS23845 0.82 -1.1
4,923,090 + ABIE41_RS23845 0.82 +0.5
4,923,091 - ABIE41_RS23845 0.82 -0.1
4,923,091 - ABIE41_RS23845 0.82 +0.1
4,923,091 - ABIE41_RS23845 0.82 +0.7
4,923,091 - ABIE41_RS23845 0.82 +0.6
4,923,091 - ABIE41_RS23845 0.82 -0.4
4,923,091 - ABIE41_RS23845 0.82 -0.1
4,923,091 - ABIE41_RS23845 0.82 -1.6
4,923,091 - ABIE41_RS23845 0.82 -0.5
4,923,091 - ABIE41_RS23845 0.82 -0.9
4,923,091 - ABIE41_RS23845 0.82 +1.0
4,923,091 - ABIE41_RS23845 0.82 -2.3
4,923,091 - ABIE41_RS23845 0.82 -0.3
4,923,091 - ABIE41_RS23845 0.82 -0.7
4,923,091 - ABIE41_RS23845 0.82 -0.2
4,923,091 - ABIE41_RS23845 0.82 -0.4
4,923,092 + ABIE41_RS23845 0.82 +0.3
4,923,092 + ABIE41_RS23845 0.82 -0.9
4,923,092 + ABIE41_RS23845 0.82 +0.7
4,923,197 + ABIE41_RS23845 0.85 +0.2
4,923,198 - ABIE41_RS23845 0.85 -0.7
4,923,198 - ABIE41_RS23845 0.85 +1.6
4,923,299 + ABIE41_RS23845 0.89 +0.1
4,923,341 + -0.4
4,923,341 + -0.7
4,923,341 + -0.5
4,923,342 - -0.1
4,923,342 - +0.6
4,923,342 - +0.2
4,923,342 - -0.6
4,923,380 + -0.6
4,923,380 + -1.9
4,923,381 - +1.1
4,923,648 + +0.2
4,923,648 + -0.5
4,923,649 - +1.2
4,923,649 - +0.2
4,923,739 + +0.1
4,923,979 + ABIE41_RS23850 0.38 +0.2
4,923,979 + ABIE41_RS23850 0.38 +0.3
4,923,980 - ABIE41_RS23850 0.38 -0.7
4,923,980 - ABIE41_RS23850 0.38 +0.1
4,923,980 - ABIE41_RS23850 0.38 +0.1
4,924,123 + ABIE41_RS23850 0.61 +2.7
4,924,124 - ABIE41_RS23850 0.61 -1.0
4,924,124 - ABIE41_RS23850 0.61 -0.0
4,924,124 - ABIE41_RS23850 0.61 +0.9
4,924,154 - ABIE41_RS23850 0.66 -0.2
4,924,210 + ABIE41_RS23850 0.75 +1.9
4,924,210 + ABIE41_RS23850 0.75 -0.1
4,924,210 + ABIE41_RS23850 0.75 -2.7
4,924,211 - ABIE41_RS23850 0.75 +1.6
4,924,211 - ABIE41_RS23850 0.75 -0.0
4,924,211 - ABIE41_RS23850 0.75 +0.3
4,924,211 - ABIE41_RS23850 0.75 -0.4
4,924,291 + ABIE41_RS23850 0.87 +0.3
4,924,292 - ABIE41_RS23850 0.88 -2.2
4,924,292 - ABIE41_RS23850 0.88 -0.3
4,924,292 - ABIE41_RS23850 0.88 -0.4
4,924,292 - ABIE41_RS23850 0.88 -0.2
4,924,292 - ABIE41_RS23850 0.88 -0.1
4,924,292 - ABIE41_RS23850 0.88 +1.0
4,924,292 - ABIE41_RS23850 0.88 +0.4
4,924,292 - ABIE41_RS23850 0.88 -0.2
4,924,557 + +0.4
4,924,558 - +1.5
4,924,558 - +0.5
4,924,885 - ABIE41_RS23855 0.69 -0.7

Or see this region's nucleotide sequence