Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS23845 and ABIE41_RS23850 are separated by 137 nucleotides ABIE41_RS23850 and ABIE41_RS23855 are separated by 162 nucleotides ABIE41_RS23855 and ABIE41_RS23860 are separated by 10 nucleotides
ABIE41_RS23845: ABIE41_RS23845 - tetratricopeptide repeat protein, at 4,920,829 to 4,923,600
_RS23845
ABIE41_RS23850: ABIE41_RS23850 - LysE family translocator, at 4,923,738 to 4,924,370
_RS23850
ABIE41_RS23855: ABIE41_RS23855 - GNAT family acetyltransferase, at 4,924,533 to 4,925,039
_RS23855
ABIE41_RS23860: ABIE41_RS23860 - DinB family protein, at 4,925,050 to 4,925,556
_RS23860
Position (kb)
4923
4924
4925 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4922.802 kb on - strand, within ABIE41_RS23845 at 4922.802 kb on - strand, within ABIE41_RS23845 at 4922.955 kb on - strand, within ABIE41_RS23845 at 4922.991 kb on + strand, within ABIE41_RS23845 at 4922.991 kb on + strand, within ABIE41_RS23845 at 4922.991 kb on + strand, within ABIE41_RS23845 at 4922.992 kb on - strand, within ABIE41_RS23845 at 4922.992 kb on - strand, within ABIE41_RS23845 at 4922.992 kb on - strand, within ABIE41_RS23845 at 4922.992 kb on - strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.090 kb on + strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.091 kb on - strand, within ABIE41_RS23845 at 4923.092 kb on + strand, within ABIE41_RS23845 at 4923.092 kb on + strand, within ABIE41_RS23845 at 4923.092 kb on + strand, within ABIE41_RS23845 at 4923.197 kb on + strand, within ABIE41_RS23845 at 4923.198 kb on - strand, within ABIE41_RS23845 at 4923.198 kb on - strand, within ABIE41_RS23845 at 4923.299 kb on + strand, within ABIE41_RS23845 at 4923.341 kb on + strand at 4923.341 kb on + strand at 4923.341 kb on + strand at 4923.342 kb on - strand at 4923.342 kb on - strand at 4923.342 kb on - strand at 4923.342 kb on - strand at 4923.380 kb on + strand at 4923.380 kb on + strand at 4923.381 kb on - strand at 4923.648 kb on + strand at 4923.648 kb on + strand at 4923.649 kb on - strand at 4923.649 kb on - strand at 4923.739 kb on + strand at 4923.979 kb on + strand, within ABIE41_RS23850 at 4923.979 kb on + strand, within ABIE41_RS23850 at 4923.980 kb on - strand, within ABIE41_RS23850 at 4923.980 kb on - strand, within ABIE41_RS23850 at 4923.980 kb on - strand, within ABIE41_RS23850 at 4924.123 kb on + strand, within ABIE41_RS23850 at 4924.124 kb on - strand, within ABIE41_RS23850 at 4924.124 kb on - strand, within ABIE41_RS23850 at 4924.124 kb on - strand, within ABIE41_RS23850 at 4924.154 kb on - strand, within ABIE41_RS23850 at 4924.210 kb on + strand, within ABIE41_RS23850 at 4924.210 kb on + strand, within ABIE41_RS23850 at 4924.210 kb on + strand, within ABIE41_RS23850 at 4924.211 kb on - strand, within ABIE41_RS23850 at 4924.211 kb on - strand, within ABIE41_RS23850 at 4924.211 kb on - strand, within ABIE41_RS23850 at 4924.211 kb on - strand, within ABIE41_RS23850 at 4924.291 kb on + strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.292 kb on - strand, within ABIE41_RS23850 at 4924.557 kb on + strand at 4924.558 kb on - strand at 4924.558 kb on - strand at 4924.885 kb on - strand, within ABIE41_RS23855
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 4,922,802 - ABIE41_RS23845 0.71 +0.3 4,922,802 - ABIE41_RS23845 0.71 -0.1 4,922,955 - ABIE41_RS23845 0.77 -1.7 4,922,991 + ABIE41_RS23845 0.78 +0.3 4,922,991 + ABIE41_RS23845 0.78 +0.0 4,922,991 + ABIE41_RS23845 0.78 -1.1 4,922,992 - ABIE41_RS23845 0.78 -0.5 4,922,992 - ABIE41_RS23845 0.78 +0.4 4,922,992 - ABIE41_RS23845 0.78 -1.0 4,922,992 - ABIE41_RS23845 0.78 +0.1 4,923,090 + ABIE41_RS23845 0.82 -0.8 4,923,090 + ABIE41_RS23845 0.82 -0.4 4,923,090 + ABIE41_RS23845 0.82 +0.6 4,923,090 + ABIE41_RS23845 0.82 +1.0 4,923,090 + ABIE41_RS23845 0.82 -0.2 4,923,090 + ABIE41_RS23845 0.82 -1.3 4,923,090 + ABIE41_RS23845 0.82 -2.8 4,923,090 + ABIE41_RS23845 0.82 -0.4 4,923,090 + ABIE41_RS23845 0.82 -1.3 4,923,090 + ABIE41_RS23845 0.82 -1.1 4,923,090 + ABIE41_RS23845 0.82 +0.5 4,923,091 - ABIE41_RS23845 0.82 -0.1 4,923,091 - ABIE41_RS23845 0.82 +0.1 4,923,091 - ABIE41_RS23845 0.82 +0.7 4,923,091 - ABIE41_RS23845 0.82 +0.6 4,923,091 - ABIE41_RS23845 0.82 -0.4 4,923,091 - ABIE41_RS23845 0.82 -0.1 4,923,091 - ABIE41_RS23845 0.82 -1.6 4,923,091 - ABIE41_RS23845 0.82 -0.5 4,923,091 - ABIE41_RS23845 0.82 -0.9 4,923,091 - ABIE41_RS23845 0.82 +1.0 4,923,091 - ABIE41_RS23845 0.82 -2.3 4,923,091 - ABIE41_RS23845 0.82 -0.3 4,923,091 - ABIE41_RS23845 0.82 -0.7 4,923,091 - ABIE41_RS23845 0.82 -0.2 4,923,091 - ABIE41_RS23845 0.82 -0.4 4,923,092 + ABIE41_RS23845 0.82 +0.3 4,923,092 + ABIE41_RS23845 0.82 -0.9 4,923,092 + ABIE41_RS23845 0.82 +0.7 4,923,197 + ABIE41_RS23845 0.85 +0.2 4,923,198 - ABIE41_RS23845 0.85 -0.7 4,923,198 - ABIE41_RS23845 0.85 +1.6 4,923,299 + ABIE41_RS23845 0.89 +0.1 4,923,341 + -0.4 4,923,341 + -0.7 4,923,341 + -0.5 4,923,342 - -0.1 4,923,342 - +0.6 4,923,342 - +0.2 4,923,342 - -0.6 4,923,380 + -0.6 4,923,380 + -1.9 4,923,381 - +1.1 4,923,648 + +0.2 4,923,648 + -0.5 4,923,649 - +1.2 4,923,649 - +0.2 4,923,739 + +0.1 4,923,979 + ABIE41_RS23850 0.38 +0.2 4,923,979 + ABIE41_RS23850 0.38 +0.3 4,923,980 - ABIE41_RS23850 0.38 -0.7 4,923,980 - ABIE41_RS23850 0.38 +0.1 4,923,980 - ABIE41_RS23850 0.38 +0.1 4,924,123 + ABIE41_RS23850 0.61 +2.7 4,924,124 - ABIE41_RS23850 0.61 -1.0 4,924,124 - ABIE41_RS23850 0.61 -0.0 4,924,124 - ABIE41_RS23850 0.61 +0.9 4,924,154 - ABIE41_RS23850 0.66 -0.2 4,924,210 + ABIE41_RS23850 0.75 +1.9 4,924,210 + ABIE41_RS23850 0.75 -0.1 4,924,210 + ABIE41_RS23850 0.75 -2.7 4,924,211 - ABIE41_RS23850 0.75 +1.6 4,924,211 - ABIE41_RS23850 0.75 -0.0 4,924,211 - ABIE41_RS23850 0.75 +0.3 4,924,211 - ABIE41_RS23850 0.75 -0.4 4,924,291 + ABIE41_RS23850 0.87 +0.3 4,924,292 - ABIE41_RS23850 0.88 -2.2 4,924,292 - ABIE41_RS23850 0.88 -0.3 4,924,292 - ABIE41_RS23850 0.88 -0.4 4,924,292 - ABIE41_RS23850 0.88 -0.2 4,924,292 - ABIE41_RS23850 0.88 -0.1 4,924,292 - ABIE41_RS23850 0.88 +1.0 4,924,292 - ABIE41_RS23850 0.88 +0.4 4,924,292 - ABIE41_RS23850 0.88 -0.2 4,924,557 + +0.4 4,924,558 - +1.5 4,924,558 - +0.5 4,924,885 - ABIE41_RS23855 0.69 -0.7
Or see this region's nucleotide sequence