Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS12445 and ABIE41_RS12450 are separated by 129 nucleotides ABIE41_RS12450 and ABIE41_RS12455 are separated by 48 nucleotides ABIE41_RS12455 and ABIE41_RS12460 overlap by 4 nucleotides
ABIE41_RS12445: ABIE41_RS12445 - glycoside hydrolase family 3 N-terminal domain-containing protein, at 2,547,727 to 2,549,961
_RS12445
ABIE41_RS12450: ABIE41_RS12450 - cold-shock protein, at 2,550,091 to 2,550,294
_RS12450
ABIE41_RS12455: ABIE41_RS12455 - MOSC domain-containing protein, at 2,550,343 to 2,550,945
_RS12455
ABIE41_RS12460: ABIE41_RS12460 - DMT family transporter, at 2,550,942 to 2,551,805
_RS12460
Position (kb)
2550
2551 Strain fitness (log2 ratio)
-1
0
1 at 2549.092 kb on + strand, within ABIE41_RS12445 at 2549.092 kb on + strand, within ABIE41_RS12445 at 2549.092 kb on + strand, within ABIE41_RS12445 at 2549.092 kb on + strand, within ABIE41_RS12445 at 2549.092 kb on + strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.093 kb on - strand, within ABIE41_RS12445 at 2549.489 kb on - strand, within ABIE41_RS12445 at 2549.491 kb on + strand, within ABIE41_RS12445 at 2549.491 kb on + strand, within ABIE41_RS12445 at 2549.491 kb on + strand, within ABIE41_RS12445 at 2549.492 kb on - strand, within ABIE41_RS12445 at 2549.492 kb on - strand, within ABIE41_RS12445 at 2549.599 kb on + strand, within ABIE41_RS12445 at 2549.600 kb on - strand, within ABIE41_RS12445 at 2549.600 kb on - strand, within ABIE41_RS12445 at 2549.614 kb on + strand, within ABIE41_RS12445 at 2549.614 kb on + strand, within ABIE41_RS12445 at 2549.615 kb on - strand, within ABIE41_RS12445 at 2549.685 kb on + strand, within ABIE41_RS12445 at 2549.686 kb on - strand, within ABIE41_RS12445 at 2549.725 kb on + strand, within ABIE41_RS12445 at 2549.725 kb on + strand, within ABIE41_RS12445 at 2549.726 kb on - strand, within ABIE41_RS12445 at 2549.726 kb on - strand, within ABIE41_RS12445 at 2549.728 kb on - strand, within ABIE41_RS12445 at 2549.856 kb on + strand at 2549.903 kb on - strand at 2550.071 kb on - strand at 2550.450 kb on - strand, within ABIE41_RS12455 at 2550.533 kb on + strand, within ABIE41_RS12455 at 2550.533 kb on + strand, within ABIE41_RS12455 at 2550.763 kb on + strand, within ABIE41_RS12455 at 2550.763 kb on + strand, within ABIE41_RS12455 at 2550.764 kb on - strand, within ABIE41_RS12455 at 2550.764 kb on - strand, within ABIE41_RS12455 at 2550.764 kb on - strand, within ABIE41_RS12455 at 2550.943 kb on + strand at 2550.943 kb on + strand at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.159 kb on + strand, within ABIE41_RS12460 at 2551.160 kb on - strand, within ABIE41_RS12460 at 2551.160 kb on - strand, within ABIE41_RS12460
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 2,549,092 + ABIE41_RS12445 0.61 +1.3 2,549,092 + ABIE41_RS12445 0.61 -1.0 2,549,092 + ABIE41_RS12445 0.61 +0.7 2,549,092 + ABIE41_RS12445 0.61 +1.4 2,549,092 + ABIE41_RS12445 0.61 +1.1 2,549,093 - ABIE41_RS12445 0.61 -0.9 2,549,093 - ABIE41_RS12445 0.61 +0.3 2,549,093 - ABIE41_RS12445 0.61 +0.8 2,549,093 - ABIE41_RS12445 0.61 +0.4 2,549,093 - ABIE41_RS12445 0.61 -0.0 2,549,093 - ABIE41_RS12445 0.61 -1.6 2,549,489 - ABIE41_RS12445 0.79 +0.9 2,549,491 + ABIE41_RS12445 0.79 -0.8 2,549,491 + ABIE41_RS12445 0.79 -0.3 2,549,491 + ABIE41_RS12445 0.79 -0.4 2,549,492 - ABIE41_RS12445 0.79 +0.5 2,549,492 - ABIE41_RS12445 0.79 +0.3 2,549,599 + ABIE41_RS12445 0.84 -0.5 2,549,600 - ABIE41_RS12445 0.84 +1.1 2,549,600 - ABIE41_RS12445 0.84 +0.4 2,549,614 + ABIE41_RS12445 0.84 -1.0 2,549,614 + ABIE41_RS12445 0.84 +1.5 2,549,615 - ABIE41_RS12445 0.84 -1.5 2,549,685 + ABIE41_RS12445 0.88 +0.2 2,549,686 - ABIE41_RS12445 0.88 +0.0 2,549,725 + ABIE41_RS12445 0.89 +0.5 2,549,725 + ABIE41_RS12445 0.89 -0.2 2,549,726 - ABIE41_RS12445 0.89 -0.0 2,549,726 - ABIE41_RS12445 0.89 -0.3 2,549,728 - ABIE41_RS12445 0.90 +0.3 2,549,856 + -0.4 2,549,903 - +0.2 2,550,071 - -1.1 2,550,450 - ABIE41_RS12455 0.18 +0.3 2,550,533 + ABIE41_RS12455 0.32 -0.5 2,550,533 + ABIE41_RS12455 0.32 -1.0 2,550,763 + ABIE41_RS12455 0.70 -0.3 2,550,763 + ABIE41_RS12455 0.70 -0.2 2,550,764 - ABIE41_RS12455 0.70 -1.0 2,550,764 - ABIE41_RS12455 0.70 +0.1 2,550,764 - ABIE41_RS12455 0.70 -0.8 2,550,943 + +0.3 2,550,943 + -1.5 2,551,159 + ABIE41_RS12460 0.25 -0.1 2,551,159 + ABIE41_RS12460 0.25 +0.0 2,551,159 + ABIE41_RS12460 0.25 +0.5 2,551,159 + ABIE41_RS12460 0.25 -0.4 2,551,159 + ABIE41_RS12460 0.25 -0.1 2,551,159 + ABIE41_RS12460 0.25 +0.7 2,551,160 - ABIE41_RS12460 0.25 -1.4 2,551,160 - ABIE41_RS12460 0.25 -0.5
Or see this region's nucleotide sequence