Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE41_RS09010 and ABIE41_RS09015 are separated by 117 nucleotides ABIE41_RS09015 and ABIE41_RS09020 are separated by 124 nucleotides ABIE41_RS09020 and ABIE41_RS09025 are separated by 110 nucleotides
ABIE41_RS09010: ABIE41_RS09010 - NAD(P)H-dependent oxidoreductase, at 1,867,427 to 1,868,008
_RS09010
ABIE41_RS09015: ABIE41_RS09015 - MarR family transcriptional regulator, at 1,868,126 to 1,868,608
_RS09015
ABIE41_RS09020: ABIE41_RS09020 - DMT family transporter, at 1,868,733 to 1,869,650
_RS09020
ABIE41_RS09025: ABIE41_RS09025 - potassium transporter Kup, at 1,869,761 to 1,871,761
_RS09025
Position (kb)
1868
1869
1870 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1867.818 kb on - strand, within ABIE41_RS09010 at 1867.919 kb on + strand, within ABIE41_RS09010 at 1867.931 kb on + strand, within ABIE41_RS09010 at 1867.931 kb on + strand, within ABIE41_RS09010 at 1867.932 kb on - strand, within ABIE41_RS09010 at 1867.932 kb on - strand, within ABIE41_RS09010 at 1868.088 kb on - strand at 1868.088 kb on - strand at 1868.858 kb on + strand, within ABIE41_RS09020 at 1868.858 kb on + strand, within ABIE41_RS09020 at 1868.859 kb on - strand, within ABIE41_RS09020 at 1868.890 kb on - strand, within ABIE41_RS09020 at 1869.240 kb on + strand, within ABIE41_RS09020 at 1869.240 kb on + strand, within ABIE41_RS09020 at 1869.240 kb on + strand, within ABIE41_RS09020 at 1869.240 kb on + strand, within ABIE41_RS09020 at 1869.241 kb on - strand, within ABIE41_RS09020 at 1869.279 kb on + strand, within ABIE41_RS09020 at 1869.280 kb on - strand, within ABIE41_RS09020 at 1869.306 kb on + strand, within ABIE41_RS09020 at 1869.306 kb on + strand, within ABIE41_RS09020 at 1869.486 kb on + strand, within ABIE41_RS09020 at 1869.763 kb on - strand at 1869.763 kb on - strand at 1869.855 kb on + strand at 1869.856 kb on - strand at 1869.856 kb on - strand at 1870.011 kb on + strand, within ABIE41_RS09025
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 1,867,818 - ABIE41_RS09010 0.67 +0.0 1,867,919 + ABIE41_RS09010 0.85 -0.4 1,867,931 + ABIE41_RS09010 0.87 +1.6 1,867,931 + ABIE41_RS09010 0.87 +0.3 1,867,932 - ABIE41_RS09010 0.87 -1.0 1,867,932 - ABIE41_RS09010 0.87 +0.0 1,868,088 - +0.3 1,868,088 - +0.3 1,868,858 + ABIE41_RS09020 0.14 -0.1 1,868,858 + ABIE41_RS09020 0.14 -0.5 1,868,859 - ABIE41_RS09020 0.14 -0.7 1,868,890 - ABIE41_RS09020 0.17 -0.2 1,869,240 + ABIE41_RS09020 0.55 +1.0 1,869,240 + ABIE41_RS09020 0.55 -2.0 1,869,240 + ABIE41_RS09020 0.55 +0.3 1,869,240 + ABIE41_RS09020 0.55 -0.8 1,869,241 - ABIE41_RS09020 0.55 +0.2 1,869,279 + ABIE41_RS09020 0.59 +0.6 1,869,280 - ABIE41_RS09020 0.60 -1.1 1,869,306 + ABIE41_RS09020 0.62 +0.3 1,869,306 + ABIE41_RS09020 0.62 -0.7 1,869,486 + ABIE41_RS09020 0.82 +0.2 1,869,763 - -3.0 1,869,763 - -0.2 1,869,855 + +0.6 1,869,856 - +1.0 1,869,856 - +1.9 1,870,011 + ABIE41_RS09025 0.12 +0.0
Or see this region's nucleotide sequence