Strain Fitness in Bosea sp. OAE506 around ABIE41_RS08135

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS08130 and ABIE41_RS08135 are separated by 234 nucleotidesABIE41_RS08135 and ABIE41_RS08140 are separated by 57 nucleotides ABIE41_RS08130: ABIE41_RS08130 - ABC transporter substrate-binding protein, at 1,681,465 to 1,682,508 _RS08130 ABIE41_RS08135: ABIE41_RS08135 - class I SAM-dependent methyltransferase, at 1,682,743 to 1,683,459 _RS08135 ABIE41_RS08140: ABIE41_RS08140 - serine/threonine dehydratase, at 1,683,517 to 1,685,223 _RS08140 Position (kb) 1682 1683 1684Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1681.871 kb on + strand, within ABIE41_RS08130at 1681.872 kb on - strand, within ABIE41_RS08130at 1681.887 kb on - strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.928 kb on + strand, within ABIE41_RS08130at 1681.929 kb on - strand, within ABIE41_RS08130at 1682.004 kb on + strand, within ABIE41_RS08130at 1682.004 kb on + strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.005 kb on - strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.174 kb on + strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.175 kb on - strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.183 kb on + strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.184 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.262 kb on - strand, within ABIE41_RS08130at 1682.345 kb on + strand, within ABIE41_RS08130at 1682.345 kb on + strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.346 kb on - strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.363 kb on + strand, within ABIE41_RS08130at 1682.364 kb on - strand, within ABIE41_RS08130at 1682.369 kb on + strand, within ABIE41_RS08130at 1682.370 kb on - strand, within ABIE41_RS08130at 1682.370 kb on - strand, within ABIE41_RS08130at 1682.390 kb on + strand, within ABIE41_RS08130at 1682.606 kb on + strandat 1682.831 kb on + strand, within ABIE41_RS08135at 1682.832 kb on - strand, within ABIE41_RS08135at 1682.832 kb on - strand, within ABIE41_RS08135at 1682.945 kb on + strand, within ABIE41_RS08135at 1682.945 kb on + strand, within ABIE41_RS08135at 1682.946 kb on - strand, within ABIE41_RS08135at 1682.963 kb on + strand, within ABIE41_RS08135at 1682.963 kb on + strand, within ABIE41_RS08135at 1682.980 kb on + strand, within ABIE41_RS08135at 1682.980 kb on + strand, within ABIE41_RS08135at 1682.981 kb on - strand, within ABIE41_RS08135at 1683.603 kb on - strandat 1684.094 kb on + strand, within ABIE41_RS08140at 1684.094 kb on + strand, within ABIE41_RS08140at 1684.094 kb on + strand, within ABIE41_RS08140at 1684.094 kb on + strand, within ABIE41_RS08140at 1684.094 kb on + strand, within ABIE41_RS08140at 1684.095 kb on - strand, within ABIE41_RS08140at 1684.212 kb on - strand, within ABIE41_RS08140

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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1,681,871 + ABIE41_RS08130 0.39 -0.7
1,681,872 - ABIE41_RS08130 0.39 +0.5
1,681,887 - ABIE41_RS08130 0.40 +0.1
1,681,928 + ABIE41_RS08130 0.44 -0.1
1,681,928 + ABIE41_RS08130 0.44 +0.3
1,681,928 + ABIE41_RS08130 0.44 +0.3
1,681,928 + ABIE41_RS08130 0.44 +0.1
1,681,929 - ABIE41_RS08130 0.44 -2.4
1,682,004 + ABIE41_RS08130 0.52 -0.5
1,682,004 + ABIE41_RS08130 0.52 -0.7
1,682,005 - ABIE41_RS08130 0.52 -0.1
1,682,005 - ABIE41_RS08130 0.52 -0.8
1,682,005 - ABIE41_RS08130 0.52 -0.2
1,682,174 + ABIE41_RS08130 0.68 +0.1
1,682,174 + ABIE41_RS08130 0.68 -3.8
1,682,174 + ABIE41_RS08130 0.68 +0.2
1,682,175 - ABIE41_RS08130 0.68 +0.9
1,682,175 - ABIE41_RS08130 0.68 +0.3
1,682,175 - ABIE41_RS08130 0.68 +0.6
1,682,175 - ABIE41_RS08130 0.68 -1.1
1,682,175 - ABIE41_RS08130 0.68 +1.6
1,682,183 + ABIE41_RS08130 0.69 -2.9
1,682,183 + ABIE41_RS08130 0.69 +0.3
1,682,183 + ABIE41_RS08130 0.69 -1.6
1,682,183 + ABIE41_RS08130 0.69 +0.1
1,682,183 + ABIE41_RS08130 0.69 +0.1
1,682,183 + ABIE41_RS08130 0.69 -0.7
1,682,183 + ABIE41_RS08130 0.69 -0.1
1,682,183 + ABIE41_RS08130 0.69 -0.3
1,682,184 - ABIE41_RS08130 0.69 +0.6
1,682,184 - ABIE41_RS08130 0.69 -0.6
1,682,184 - ABIE41_RS08130 0.69 -1.1
1,682,184 - ABIE41_RS08130 0.69 -0.4
1,682,262 - ABIE41_RS08130 0.76 +0.1
1,682,262 - ABIE41_RS08130 0.76 +0.0
1,682,262 - ABIE41_RS08130 0.76 +0.2
1,682,345 + ABIE41_RS08130 0.84 +1.1
1,682,345 + ABIE41_RS08130 0.84 +0.3
1,682,346 - ABIE41_RS08130 0.84 +1.9
1,682,346 - ABIE41_RS08130 0.84 +0.4
1,682,346 - ABIE41_RS08130 0.84 +1.6
1,682,363 + ABIE41_RS08130 0.86 -0.1
1,682,363 + ABIE41_RS08130 0.86 +0.2
1,682,363 + ABIE41_RS08130 0.86 -1.1
1,682,363 + ABIE41_RS08130 0.86 -0.0
1,682,364 - ABIE41_RS08130 0.86 -1.2
1,682,369 + ABIE41_RS08130 0.87 -2.1
1,682,370 - ABIE41_RS08130 0.87 +0.7
1,682,370 - ABIE41_RS08130 0.87 +1.3
1,682,390 + ABIE41_RS08130 0.89 -1.2
1,682,606 + +0.2
1,682,831 + ABIE41_RS08135 0.12 +0.6
1,682,832 - ABIE41_RS08135 0.12 -0.2
1,682,832 - ABIE41_RS08135 0.12 +0.5
1,682,945 + ABIE41_RS08135 0.28 +1.0
1,682,945 + ABIE41_RS08135 0.28 -0.1
1,682,946 - ABIE41_RS08135 0.28 +0.5
1,682,963 + ABIE41_RS08135 0.31 +0.9
1,682,963 + ABIE41_RS08135 0.31 +0.2
1,682,980 + ABIE41_RS08135 0.33 -0.5
1,682,980 + ABIE41_RS08135 0.33 +0.2
1,682,981 - ABIE41_RS08135 0.33 +0.3
1,683,603 - +0.6
1,684,094 + ABIE41_RS08140 0.34 +0.8
1,684,094 + ABIE41_RS08140 0.34 -0.3
1,684,094 + ABIE41_RS08140 0.34 +0.6
1,684,094 + ABIE41_RS08140 0.34 -1.3
1,684,094 + ABIE41_RS08140 0.34 +0.0
1,684,095 - ABIE41_RS08140 0.34 +0.6
1,684,212 - ABIE41_RS08140 0.41 +0.4

Or see this region's nucleotide sequence