Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2255

Experiment: KB with Berberine 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 15.6 ug/ml
2,619,098	-				-0.7
2,619,226	-				-2.0
2,619,343	-		Psyr_2254	0.19	+0.1
2,619,343	-		Psyr_2254	0.19	+0.3
2,619,573	+		Psyr_2254	0.45	-0.4
2,619,573	+		Psyr_2254	0.45	-0.7
2,619,718	-		Psyr_2254	0.62	+0.7
2,619,718	-		Psyr_2254	0.62	-1.1
2,619,747	+		Psyr_2254	0.65	-0.3
2,619,747	+		Psyr_2254	0.65	-0.5
2,619,747	+		Psyr_2254	0.65	-0.1
2,619,748	-		Psyr_2254	0.65	+0.4
2,619,748	-		Psyr_2254	0.65	+0.1
2,619,748	-		Psyr_2254	0.65	-1.8
2,619,847	-		Psyr_2254	0.76	+0.9
2,619,863	+		Psyr_2254	0.78	+0.9
2,620,126	-				+0.3
2,620,188	-		Psyr_2255	0.16	+0.1
2,620,469	+		Psyr_2255	0.50	-0.2
2,620,470	-		Psyr_2255	0.50	+0.3
2,620,714	-		Psyr_2255	0.80	-0.7
2,620,714	-		Psyr_2255	0.80	+0.5
2,620,899	+				-0.9
2,620,983	-				+1.5
2,620,994	+		Psyr_2256	0.11	-1.9
2,621,098	+		Psyr_2256	0.25	-2.6
2,621,098	+		Psyr_2256	0.25	+0.7
2,621,681	-				-0.6