Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_2233

Experiment: KB with Berberine 15.6 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Berberine 15.6 ug/ml
2,595,578	-		Psyr_2232	0.39	-0.5
2,595,793	+		Psyr_2232	0.56	+1.2
2,595,793	+		Psyr_2232	0.56	-0.3
2,595,822	+		Psyr_2232	0.58	-1.3
2,595,823	-		Psyr_2232	0.58	+0.3
2,595,823	-		Psyr_2232	0.58	+0.2
2,595,835	+		Psyr_2232	0.59	-1.7
2,595,835	+		Psyr_2232	0.59	-0.9
2,596,108	-		Psyr_2232	0.80	+1.0
2,596,224	+		Psyr_2232	0.89	-0.7
2,596,224	+		Psyr_2232	0.89	+0.5
2,596,225	-		Psyr_2232	0.89	-0.8
2,596,339	+				+0.6
2,596,340	-				+0.4
2,596,377	-				-1.0
2,596,394	+				+0.5
2,596,632	-				-0.1
2,597,024	+				+0.3
2,597,024	+				-0.5
2,597,024	+				-1.0
2,597,025	-				+1.5
2,597,025	-				+0.3
2,597,025	-				+2.7
2,597,025	-				-1.1
2,597,025	-				+0.7
2,597,025	-				-0.6
2,597,062	+				+0.2
2,597,062	+				+0.2
2,597,063	-				-0.1
2,597,064	+				+0.2
2,597,065	-				-0.8
2,597,124	+				-0.3
2,597,124	+				-0.1
2,597,124	+				+1.7
2,597,124	+				+1.7
2,597,125	-				+1.3
2,597,125	-				-0.8
2,597,370	+		Psyr_2235	0.18	+0.2
2,597,370	+		Psyr_2235	0.18	-1.3
2,597,370	+		Psyr_2235	0.18	+0.8
2,597,370	+		Psyr_2235	0.18	+0.7
2,597,371	-		Psyr_2235	0.18	-0.1
2,597,371	-		Psyr_2235	0.18	+0.5
2,597,376	+		Psyr_2235	0.18	-0.2
2,597,470	+		Psyr_2235	0.27	+0.5