Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29565

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,560,598	+		PFLU_RS29555	0.76	-2.0
6,560,598	+		PFLU_RS29555	0.76	+1.8
6,560,598	+		PFLU_RS29555	0.76	+0.2
6,560,598	+		PFLU_RS29555	0.76	-1.3
6,560,598	+		PFLU_RS29555	0.76	-0.4
6,560,598	+		PFLU_RS29555	0.76	-0.5
6,560,598	+		PFLU_RS29555	0.76	-0.5
6,560,598	+		PFLU_RS29555	0.76	-1.2
6,560,598	+		PFLU_RS29555	0.76	+0.1
6,560,599	-		PFLU_RS29555	0.76	-0.5
6,560,599	-		PFLU_RS29555	0.76	+0.4
6,560,599	-		PFLU_RS29555	0.76	-1.3
6,560,599	-		PFLU_RS29555	0.76	-0.6
6,560,599	-		PFLU_RS29555	0.76	-0.7
6,560,599	-		PFLU_RS29555	0.76	-1.6
6,560,658	+		PFLU_RS29555	0.81	+0.5
6,560,715	+		PFLU_RS29555	0.85	+0.2
6,560,716	-		PFLU_RS29555	0.85	-0.1
6,560,716	-		PFLU_RS29555	0.85	-0.4
6,560,716	-		PFLU_RS29555	0.85	+0.5
6,560,727	+		PFLU_RS29555	0.85	-0.1
6,560,728	-		PFLU_RS29555	0.86	+0.6
6,560,728	-		PFLU_RS29555	0.86	+0.4
6,561,040	+				-0.0
6,561,040	+				+0.5
6,561,041	-				+0.0
6,561,064	+				-0.9
6,561,064	+				+0.6
6,561,065	-				-0.1
6,561,209	+		PFLU_RS29560	0.45	-2.5
6,561,430	+				+2.0
6,561,430	+				+0.0
6,561,430	+				-0.0
6,561,430	+				-0.2
6,561,430	+				+0.8
6,561,431	-				-0.3
6,561,523	-				-0.3
6,561,524	+				-0.4
6,561,524	+				-0.4
6,561,697	+		PFLU_RS29565	0.17	-0.1
6,561,698	-		PFLU_RS29565	0.17	+0.1
6,561,698	-		PFLU_RS29565	0.17	+0.6
6,561,772	+		PFLU_RS29565	0.25	+0.1
6,561,772	+		PFLU_RS29565	0.25	-0.0
6,561,772	+		PFLU_RS29565	0.25	-0.6
6,561,772	+		PFLU_RS29565	0.25	-1.0
6,561,772	+		PFLU_RS29565	0.25	+0.6
6,561,773	-		PFLU_RS29565	0.25	+0.1
6,561,773	-		PFLU_RS29565	0.25	-1.1
6,561,773	-		PFLU_RS29565	0.25	-2.7
6,561,773	-		PFLU_RS29565	0.25	-0.2
6,561,773	-		PFLU_RS29565	0.25	+2.1
6,561,773	-		PFLU_RS29565	0.25	+0.5
6,561,773	-		PFLU_RS29565	0.25	-1.0
6,561,811	+		PFLU_RS29565	0.29	-0.6
6,561,811	+		PFLU_RS29565	0.29	+1.2
6,561,811	+		PFLU_RS29565	0.29	-0.5
6,561,812	-		PFLU_RS29565	0.30	+0.1
6,561,840	-		PFLU_RS29565	0.33	+0.7
6,561,840	-		PFLU_RS29565	0.33	+2.1
6,561,840	-		PFLU_RS29565	0.33	+0.4
6,561,851	+		PFLU_RS29565	0.34	-1.8
6,561,851	+		PFLU_RS29565	0.34	-0.0
6,561,851	+		PFLU_RS29565	0.34	+0.5
6,561,851	+		PFLU_RS29565	0.34	-0.1
6,561,851	+		PFLU_RS29565	0.34	-0.3
6,561,851	+		PFLU_RS29565	0.34	-2.4
6,561,851	+		PFLU_RS29565	0.34	+0.6
6,561,852	-		PFLU_RS29565	0.34	+1.2
6,561,852	-		PFLU_RS29565	0.34	+0.1
6,561,852	-		PFLU_RS29565	0.34	-0.5
6,561,852	-		PFLU_RS29565	0.34	+1.0
6,561,852	-		PFLU_RS29565	0.34	+0.5
6,561,852	-		PFLU_RS29565	0.34	-0.2
6,561,877	-		PFLU_RS29565	0.37	+0.5
6,562,034	+		PFLU_RS29565	0.54	-0.6
6,562,085	+		PFLU_RS29565	0.59	-1.0
6,562,085	+		PFLU_RS29565	0.59	+0.9
6,562,095	+		PFLU_RS29565	0.60	+0.5
6,562,096	-		PFLU_RS29565	0.60	+0.1
6,562,096	-		PFLU_RS29565	0.60	-1.5
6,562,136	+		PFLU_RS29565	0.65	+0.2
6,562,136	+		PFLU_RS29565	0.65	-1.3
6,562,136	+		PFLU_RS29565	0.65	+0.7
6,562,136	+		PFLU_RS29565	0.65	-0.5
6,562,136	+		PFLU_RS29565	0.65	+0.1
6,562,136	+		PFLU_RS29565	0.65	+0.3
6,562,137	-		PFLU_RS29565	0.65	+0.6
6,562,137	-		PFLU_RS29565	0.65	+0.6
6,562,137	-		PFLU_RS29565	0.65	+2.4
6,562,137	-		PFLU_RS29565	0.65	-0.3
6,562,139	+		PFLU_RS29565	0.65	-0.5
6,562,322	+		PFLU_RS29565	0.85	-0.3
6,562,322	+		PFLU_RS29565	0.85	+0.1
6,562,323	-		PFLU_RS29565	0.85	+0.4
6,562,323	-		PFLU_RS29565	0.85	+0.4
6,562,323	-		PFLU_RS29565	0.85	+1.5
6,562,323	-		PFLU_RS29565	0.85	-0.0
6,562,337	+		PFLU_RS29565	0.86	-0.6
6,562,337	+		PFLU_RS29565	0.86	+0.9
6,562,337	+		PFLU_RS29565	0.86	+0.3
6,562,338	-		PFLU_RS29565	0.86	+1.3
6,562,338	-		PFLU_RS29565	0.86	+0.6
6,562,338	-		PFLU_RS29565	0.86	+0.7
6,562,338	-		PFLU_RS29565	0.86	+0.4
6,562,338	-		PFLU_RS29565	0.86	+0.5
6,562,464	+				+1.1
6,562,464	+				+0.1
6,562,464	+				-2.4
6,562,464	+				+0.0
6,562,464	+				+0.4
6,562,464	+				-0.1
6,562,464	+				-1.3
6,562,464	+				+1.0
6,562,464	+				+0.1
6,562,464	+				-0.3
6,562,464	+				-0.5
6,562,465	-				+0.5
6,562,465	-				+0.0
6,562,465	-				+2.0
6,562,465	-				-0.5
6,562,465	-				+0.7
6,562,465	-				+0.1
6,562,465	-				-0.6
6,562,465	-				+0.2
6,562,465	-				+1.0
6,562,480	+				-0.4
6,562,481	-				-1.9
6,562,537	+				-0.6
6,562,538	-				+0.8
6,562,538	-				-0.1
6,562,619	+				-0.1
6,562,620	-				-1.1
6,562,740	-		PFLU_RS29570	0.11	-0.0
6,562,767	+		PFLU_RS29570	0.13	+0.8
6,562,767	+		PFLU_RS29570	0.13	-0.7
6,562,767	+		PFLU_RS29570	0.13	+0.4
6,562,768	-		PFLU_RS29570	0.13	-1.5
6,562,769	+		PFLU_RS29570	0.13	-0.2
6,562,769	+		PFLU_RS29570	0.13	+0.9
6,562,769	+		PFLU_RS29570	0.13	+0.6
6,562,769	+		PFLU_RS29570	0.13	-0.9
6,562,769	+		PFLU_RS29570	0.13	+0.6
6,562,769	+		PFLU_RS29570	0.13	-0.0
6,562,769	+		PFLU_RS29570	0.13	-1.2
6,562,770	-		PFLU_RS29570	0.13	-0.8
6,562,770	-		PFLU_RS29570	0.13	-0.4
6,562,770	-		PFLU_RS29570	0.13	-0.4
6,562,770	-		PFLU_RS29570	0.13	+0.2
6,562,901	+		PFLU_RS29570	0.20	+0.5
6,562,901	+		PFLU_RS29570	0.20	+1.5
6,562,901	+		PFLU_RS29570	0.20	-1.3
6,562,902	-		PFLU_RS29570	0.20	+0.4
6,562,902	-		PFLU_RS29570	0.20	-0.0
6,562,902	-		PFLU_RS29570	0.20	+0.5
6,562,902	-		PFLU_RS29570	0.20	+0.9
6,562,902	-		PFLU_RS29570	0.20	-0.4
6,562,902	-		PFLU_RS29570	0.20	-0.8
6,563,157	-		PFLU_RS29570	0.35	+0.7
6,563,157	-		PFLU_RS29570	0.35	+0.3
6,563,157	-		PFLU_RS29570	0.35	+0.3
6,563,157	-		PFLU_RS29570	0.35	-1.4
6,563,294	+		PFLU_RS29570	0.43	+0.4
6,563,294	+		PFLU_RS29570	0.43	+0.1
6,563,294	+		PFLU_RS29570	0.43	+1.8
6,563,295	-		PFLU_RS29570	0.43	+0.8
6,563,324	+		PFLU_RS29570	0.45	+0.2
6,563,324	+		PFLU_RS29570	0.45	+1.4
6,563,324	+		PFLU_RS29570	0.45	-0.1
6,563,324	+		PFLU_RS29570	0.45	+0.5
6,563,325	-		PFLU_RS29570	0.45	+0.8
6,563,325	-		PFLU_RS29570	0.45	-0.5
6,563,325	-		PFLU_RS29570	0.45	+0.1