Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS27770

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
6,180,662	+		PFLU_RS27765	0.46	+1.7
6,180,662	+		PFLU_RS27765	0.46	-0.2
6,180,662	+		PFLU_RS27765	0.46	+0.5
6,180,662	+		PFLU_RS27765	0.46	-0.4
6,180,662	+		PFLU_RS27765	0.46	-1.2
6,180,662	+		PFLU_RS27765	0.46	+0.2
6,180,662	+		PFLU_RS27765	0.46	+0.8
6,180,662	+		PFLU_RS27765	0.46	+0.2
6,180,662	+		PFLU_RS27765	0.46	-0.7
6,180,662	+		PFLU_RS27765	0.46	+0.2
6,180,662	+		PFLU_RS27765	0.46	-0.4
6,180,662	+		PFLU_RS27765	0.46	-0.3
6,180,663	-		PFLU_RS27765	0.46	-0.2
6,180,663	-		PFLU_RS27765	0.46	+0.2
6,180,663	-		PFLU_RS27765	0.46	-0.0
6,180,663	-		PFLU_RS27765	0.46	+0.9
6,180,663	-		PFLU_RS27765	0.46	-0.2
6,180,663	-		PFLU_RS27765	0.46	+0.3
6,180,663	-		PFLU_RS27765	0.46	+0.3
6,180,663	-		PFLU_RS27765	0.46	-1.6
6,180,663	-		PFLU_RS27765	0.46	-1.7
6,180,663	-		PFLU_RS27765	0.46	+1.3
6,180,663	-		PFLU_RS27765	0.46	+1.3
6,180,663	-		PFLU_RS27765	0.46	+0.9
6,180,666	+		PFLU_RS27765	0.46	+0.8
6,180,666	+		PFLU_RS27765	0.46	-0.3
6,180,666	+		PFLU_RS27765	0.46	+0.8
6,180,666	+		PFLU_RS27765	0.46	+1.8
6,180,666	+		PFLU_RS27765	0.46	-1.8
6,180,666	+		PFLU_RS27765	0.46	-1.0
6,180,666	+		PFLU_RS27765	0.46	-2.6
6,180,667	-		PFLU_RS27765	0.46	+0.4
6,180,667	-		PFLU_RS27765	0.46	+0.6
6,180,667	-		PFLU_RS27765	0.46	-0.0
6,180,667	-		PFLU_RS27765	0.46	-1.7
6,180,667	-		PFLU_RS27765	0.46	-1.1
6,180,667	-		PFLU_RS27765	0.46	-0.8
6,180,667	-		PFLU_RS27765	0.46	+1.0
6,180,667	-		PFLU_RS27765	0.46	-2.4
6,180,667	-		PFLU_RS27765	0.46	-0.0
6,180,667	-		PFLU_RS27765	0.46	-0.1
6,180,667	-		PFLU_RS27765	0.46	+0.3
6,180,667	-		PFLU_RS27765	0.46	+1.2
6,180,678	+		PFLU_RS27765	0.47	+0.6
6,180,679	-		PFLU_RS27765	0.47	+0.6
6,180,796	-		PFLU_RS27765	0.55	+0.1
6,180,812	+		PFLU_RS27765	0.56	+0.3
6,180,813	-		PFLU_RS27765	0.56	+1.7
6,180,883	-		PFLU_RS27765	0.61	+1.1
6,180,883	-		PFLU_RS27765	0.61	+0.1
6,180,915	+		PFLU_RS27765	0.63	+0.1
6,180,915	+		PFLU_RS27765	0.63	-1.0
6,180,915	+		PFLU_RS27765	0.63	+2.0
6,180,916	-		PFLU_RS27765	0.63	-0.1
6,180,931	+		PFLU_RS27765	0.65	+0.2
6,180,932	-		PFLU_RS27765	0.65	+0.8
6,180,932	-		PFLU_RS27765	0.65	-0.1
6,180,932	-		PFLU_RS27765	0.65	-1.0
6,180,932	-		PFLU_RS27765	0.65	-1.6
6,180,932	-		PFLU_RS27765	0.65	-0.4
6,180,932	-		PFLU_RS27765	0.65	+1.2
6,181,012	+		PFLU_RS27765	0.70	+1.5
6,181,012	+		PFLU_RS27765	0.70	+0.0
6,181,012	+		PFLU_RS27765	0.70	-0.3
6,181,012	+		PFLU_RS27765	0.70	+0.0
6,181,013	-		PFLU_RS27765	0.70	+0.1
6,181,013	-		PFLU_RS27765	0.70	-1.0
6,181,071	+		PFLU_RS27765	0.74	+0.3
6,181,071	+		PFLU_RS27765	0.74	+0.2
6,181,071	+		PFLU_RS27765	0.74	-2.2
6,181,071	+		PFLU_RS27765	0.74	-2.8
6,181,071	+		PFLU_RS27765	0.74	+1.5
6,181,071	+		PFLU_RS27765	0.74	+0.4
6,181,072	-		PFLU_RS27765	0.74	-0.4
6,181,092	+		PFLU_RS27765	0.76	+0.0
6,181,155	+		PFLU_RS27765	0.80	-0.1
6,181,155	+		PFLU_RS27765	0.80	+0.7
6,181,155	+		PFLU_RS27765	0.80	-0.1
6,181,155	+		PFLU_RS27765	0.80	-1.8
6,181,156	-		PFLU_RS27765	0.80	+0.7
6,181,156	-		PFLU_RS27765	0.80	-0.1
6,181,156	-		PFLU_RS27765	0.80	+0.1
6,181,156	-		PFLU_RS27765	0.80	+0.2
6,181,156	-		PFLU_RS27765	0.80	+0.0
6,181,156	-		PFLU_RS27765	0.80	+0.2
6,181,159	+		PFLU_RS27765	0.80	+0.4
6,181,159	+		PFLU_RS27765	0.80	-0.9
6,181,159	+		PFLU_RS27765	0.80	-2.4
6,181,159	+		PFLU_RS27765	0.80	-0.2
6,181,160	-		PFLU_RS27765	0.80	-0.5
6,181,160	-		PFLU_RS27765	0.80	+0.7
6,181,160	-		PFLU_RS27765	0.80	+0.5
6,181,410	+				-2.3
6,181,410	+				-0.5
6,181,410	+				+1.5
6,181,410	+				-0.3
6,181,410	+				+0.7
6,181,410	+				+0.4
6,181,410	+				-1.0
6,181,410	+				-0.7
6,181,411	-				-0.9
6,181,411	-				-0.3
6,181,411	-				+0.7
6,181,411	-				+0.1
6,181,411	-				-1.2
6,181,411	-				+0.3
6,181,411	-				+0.8
6,181,461	-				+1.0
6,181,461	-				+1.8
6,181,461	-				-0.7
6,181,467	-				+0.4
6,181,467	-				+1.0
6,181,554	+		PFLU_RS27770	0.17	+2.2
6,181,694	+		PFLU_RS27770	0.38	+1.3
6,181,817	+		PFLU_RS27770	0.56	-0.5
6,181,817	+		PFLU_RS27770	0.56	+0.6
6,181,817	+		PFLU_RS27770	0.56	+0.7
6,181,818	-		PFLU_RS27770	0.56	+0.3
6,181,818	-		PFLU_RS27770	0.56	+0.8
6,181,818	-		PFLU_RS27770	0.56	+0.3
6,181,818	-		PFLU_RS27770	0.56	+1.5
6,181,991	+		PFLU_RS27770	0.82	+0.4
6,181,992	-		PFLU_RS27770	0.82	+0.1
6,182,056	+				+0.2
6,182,145	-				+0.3
6,182,145	-				-1.6
6,182,145	-				+0.1
6,182,161	+				-1.2
6,182,210	+		PFLU_RS27775	0.18	-0.2
6,182,211	-		PFLU_RS27775	0.18	+0.8
6,182,211	-		PFLU_RS27775	0.18	+1.0
6,182,378	+		PFLU_RS27775	0.52	-0.0
6,182,378	+		PFLU_RS27775	0.52	-1.2
6,182,386	-		PFLU_RS27775	0.53	-1.2
6,182,537	+		PFLU_RS27775	0.83	+1.4
6,182,537	+		PFLU_RS27775	0.83	+0.2
6,182,537	+		PFLU_RS27775	0.83	+0.8
6,182,537	+		PFLU_RS27775	0.83	+1.1
6,182,537	+		PFLU_RS27775	0.83	+0.8
6,182,537	+		PFLU_RS27775	0.83	+0.4
6,182,537	+		PFLU_RS27775	0.83	+0.9
6,182,537	+		PFLU_RS27775	0.83	-1.5
6,182,537	+		PFLU_RS27775	0.83	+0.4
6,182,537	+		PFLU_RS27775	0.83	-0.2
6,182,538	-		PFLU_RS27775	0.84	-3.0
6,182,538	-		PFLU_RS27775	0.84	+0.4
6,182,538	-		PFLU_RS27775	0.84	+0.0
6,182,538	-		PFLU_RS27775	0.84	+1.4
6,182,538	-		PFLU_RS27775	0.84	-0.9
6,182,538	-		PFLU_RS27775	0.84	+0.4
6,182,538	-		PFLU_RS27775	0.84	+0.9
6,182,552	+		PFLU_RS27775	0.86	+1.4
6,182,553	-		PFLU_RS27775	0.87	+0.8
6,182,643	+				+1.5
6,182,643	+				-0.9
6,182,644	-				-0.7
6,182,654	+				-0.5
6,182,674	+				-1.0
6,182,674	+				+0.7
6,182,674	+				-0.5
6,182,674	+				-0.2
6,182,674	+				-1.0
6,182,674	+				+0.2
6,182,674	+				-0.3
6,182,674	+				+0.4
6,182,674	+				+0.2
6,182,674	+				+0.2
6,182,674	+				+0.5
6,182,675	-				+0.2
6,182,675	-				+0.6
6,182,675	-				+0.7
6,182,675	-				+1.0
6,182,675	-				+1.2
6,182,675	-				+0.5
6,182,675	-				-2.5
6,182,675	-				-0.8
6,182,675	-				+0.6
6,182,675	-				-2.1
6,182,679	-				+0.4
6,182,679	-				+0.5
6,182,679	-				+0.3
6,182,679	-				-0.1
6,182,742	+				-0.1
6,182,757	+				+0.9
6,182,757	+				+0.1
6,182,757	+				+0.4
6,182,758	-				+0.5
6,182,788	+				-1.7
6,182,788	+				+0.1
6,182,788	+				-0.3
6,182,788	+				+0.8
6,182,788	+				-0.6
6,182,788	+				+0.1
6,182,788	+				-0.5
6,182,789	-				+0.0
6,182,789	-				-0.0
6,182,789	-				-0.4
6,182,789	-				-0.2
6,182,789	-				-1.6
6,182,789	-				-0.5
6,182,789	-				+0.3
6,182,789	-				-0.5
6,182,789	-				-0.1
6,182,789	-				+1.2
6,182,789	-				+0.7
6,182,792	+				+0.2
6,182,792	+				-0.4
6,182,792	+				-0.1
6,182,792	+				-1.4
6,182,792	+				-0.6
6,182,792	+				+0.6
6,182,793	-				+1.3
6,182,793	-				+0.0
6,182,857	+				+0.9
6,182,858	-				+0.5
6,182,891	-		PFLU_RS27780	0.11	-0.9
6,182,916	+		PFLU_RS27780	0.14	+0.2
6,182,916	+		PFLU_RS27780	0.14	-0.2
6,182,916	+		PFLU_RS27780	0.14	+0.3
6,182,916	+		PFLU_RS27780	0.14	+0.8
6,182,916	+		PFLU_RS27780	0.14	-0.6
6,182,916	+		PFLU_RS27780	0.14	-0.8
6,182,916	+		PFLU_RS27780	0.14	+0.5
6,182,916	+		PFLU_RS27780	0.14	-0.4
6,182,917	-		PFLU_RS27780	0.14	+0.9
6,182,917	-		PFLU_RS27780	0.14	-2.0
6,182,917	-		PFLU_RS27780	0.14	+1.2
6,182,917	-		PFLU_RS27780	0.14	-0.8
6,182,917	-		PFLU_RS27780	0.14	+0.3
6,182,917	-		PFLU_RS27780	0.14	+1.3
6,182,917	-		PFLU_RS27780	0.14	+1.1
6,183,042	+		PFLU_RS27780	0.28	+0.0
6,183,042	+		PFLU_RS27780	0.28	-0.2
6,183,042	+		PFLU_RS27780	0.28	+0.9
6,183,042	+		PFLU_RS27780	0.28	+1.0
6,183,043	-		PFLU_RS27780	0.28	-1.7
6,183,043	-		PFLU_RS27780	0.28	-0.6