Experiment: Trisodium citrate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS26450 and PFLU_RS26455 are separated by 223 nucleotides PFLU_RS26455 and PFLU_RS26460 are separated by 43 nucleotides PFLU_RS26460 and PFLU_RS26465 are separated by 117 nucleotides
PFLU_RS26450: PFLU_RS26450 - DUF3077 domain-containing protein, at 5,914,335 to 5,914,634
_RS26450
PFLU_RS26455: PFLU_RS26455 - 3'-5' exonuclease, at 5,914,858 to 5,915,469
_RS26455
PFLU_RS26460: PFLU_RS26460 - NYN domain-containing protein, at 5,915,513 to 5,915,989
_RS26460
PFLU_RS26465: PFLU_RS26465 - DUF2076 domain-containing protein, at 5,916,107 to 5,916,853
_RS26465
Position (kb) 5915
5916 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5914.708 kb on + strand at 5914.708 kb on + strand at 5914.709 kb on - strand at 5914.718 kb on + strand at 5914.742 kb on - strand at 5914.939 kb on + strand, within PFLU_RS26455 at 5914.939 kb on + strand, within PFLU_RS26455 at 5914.940 kb on - strand, within PFLU_RS26455 at 5915.171 kb on + strand, within PFLU_RS26455 at 5915.171 kb on + strand, within PFLU_RS26455 at 5915.172 kb on - strand, within PFLU_RS26455 at 5915.458 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.460 kb on + strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.461 kb on - strand at 5915.488 kb on + strand at 5915.488 kb on + strand at 5915.489 kb on - strand at 5915.489 kb on - strand at 5915.489 kb on - strand at 5915.496 kb on + strand at 5915.496 kb on + strand at 5915.497 kb on - strand at 5915.497 kb on - strand at 5915.500 kb on - strand at 5915.500 kb on - strand at 5915.500 kb on - strand at 5915.500 kb on - strand at 5915.500 kb on - strand at 5915.500 kb on - strand at 5915.514 kb on + strand at 5915.515 kb on - strand at 5915.515 kb on - strand at 5915.515 kb on - strand at 5915.515 kb on - strand at 5915.547 kb on + strand at 5915.547 kb on + strand at 5915.623 kb on + strand, within PFLU_RS26460 at 5915.623 kb on + strand, within PFLU_RS26460 at 5915.623 kb on + strand, within PFLU_RS26460 at 5915.623 kb on + strand, within PFLU_RS26460 at 5915.624 kb on - strand, within PFLU_RS26460 at 5915.624 kb on - strand, within PFLU_RS26460 at 5915.624 kb on - strand, within PFLU_RS26460 at 5915.769 kb on + strand, within PFLU_RS26460 at 5915.770 kb on - strand, within PFLU_RS26460 at 5915.770 kb on - strand, within PFLU_RS26460 at 5915.770 kb on - strand, within PFLU_RS26460 at 5915.770 kb on - strand, within PFLU_RS26460 at 5915.770 kb on - strand, within PFLU_RS26460 at 5915.788 kb on + strand, within PFLU_RS26460 at 5915.789 kb on - strand, within PFLU_RS26460 at 5915.853 kb on + strand, within PFLU_RS26460 at 5915.853 kb on + strand, within PFLU_RS26460 at 5915.854 kb on - strand, within PFLU_RS26460 at 5915.854 kb on - strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.859 kb on + strand, within PFLU_RS26460 at 5915.860 kb on - strand, within PFLU_RS26460 at 5915.860 kb on - strand, within PFLU_RS26460 at 5915.860 kb on - strand, within PFLU_RS26460 at 5915.860 kb on - strand, within PFLU_RS26460 at 5915.891 kb on - strand, within PFLU_RS26460 at 5915.910 kb on + strand, within PFLU_RS26460 at 5915.911 kb on - strand, within PFLU_RS26460 at 5915.911 kb on - strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.928 kb on + strand, within PFLU_RS26460 at 5915.929 kb on - strand, within PFLU_RS26460 at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.946 kb on + strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.947 kb on - strand at 5915.949 kb on + strand at 5915.949 kb on + strand at 5915.950 kb on - strand at 5915.950 kb on - strand at 5916.038 kb on + strand at 5916.065 kb on - strand at 5916.153 kb on + strand at 5916.153 kb on + strand at 5916.154 kb on - strand at 5916.325 kb on + strand, within PFLU_RS26465 at 5916.325 kb on + strand, within PFLU_RS26465 at 5916.325 kb on + strand, within PFLU_RS26465 at 5916.326 kb on - strand, within PFLU_RS26465 at 5916.326 kb on - strand, within PFLU_RS26465 at 5916.326 kb on - strand, within PFLU_RS26465 at 5916.435 kb on + strand, within PFLU_RS26465 at 5916.435 kb on + strand, within PFLU_RS26465 at 5916.604 kb on + strand, within PFLU_RS26465 at 5916.605 kb on - strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.714 kb on + strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.715 kb on - strand, within PFLU_RS26465 at 5916.717 kb on + strand, within PFLU_RS26465 at 5916.718 kb on - strand, within PFLU_RS26465 at 5916.865 kb on + strand at 5916.866 kb on - strand at 5916.866 kb on - strand at 5916.866 kb on - strand at 5916.866 kb on - strand at 5916.876 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.913 kb on + strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.914 kb on - strand at 5916.917 kb on + strand at 5916.918 kb on - strand at 5916.918 kb on - strand at 5916.918 kb on - strand at 5916.928 kb on + strand at 5916.928 kb on + strand at 5916.929 kb on - strand at 5916.961 kb on + strand at 5916.971 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Trisodium citrate (C) remove 5,914,708 + -2.5 5,914,708 + +1.1 5,914,709 - -0.6 5,914,718 + +2.2 5,914,742 - +0.3 5,914,939 + PFLU_RS26455 0.13 -0.6 5,914,939 + PFLU_RS26455 0.13 -0.4 5,914,940 - PFLU_RS26455 0.13 +0.2 5,915,171 + PFLU_RS26455 0.51 -0.6 5,915,171 + PFLU_RS26455 0.51 +0.0 5,915,172 - PFLU_RS26455 0.51 -0.0 5,915,458 + +1.0 5,915,460 + -0.0 5,915,460 + +0.5 5,915,460 + -1.3 5,915,460 + -0.2 5,915,460 + -0.8 5,915,460 + +0.1 5,915,460 + -2.4 5,915,460 + -1.0 5,915,460 + +0.2 5,915,460 + +0.8 5,915,460 + +0.3 5,915,461 - +0.2 5,915,461 - +1.3 5,915,461 - -1.4 5,915,461 - +1.9 5,915,461 - -0.9 5,915,461 - +0.8 5,915,461 - +1.4 5,915,461 - -0.1 5,915,461 - +0.3 5,915,461 - +0.2 5,915,461 - +0.3 5,915,461 - -0.4 5,915,461 - +0.0 5,915,461 - +0.1 5,915,461 - +1.0 5,915,461 - +0.1 5,915,461 - +0.1 5,915,461 - -0.6 5,915,461 - -1.4 5,915,488 + -0.1 5,915,488 + +0.8 5,915,489 - -0.4 5,915,489 - -0.9 5,915,489 - +0.5 5,915,496 + -0.6 5,915,496 + +0.4 5,915,497 - -0.9 5,915,497 - +1.0 5,915,500 - +0.6 5,915,500 - +0.3 5,915,500 - -0.9 5,915,500 - -0.6 5,915,500 - +0.7 5,915,500 - -0.3 5,915,514 + +0.9 5,915,515 - +0.5 5,915,515 - +0.8 5,915,515 - +0.1 5,915,515 - -0.0 5,915,547 + +0.8 5,915,547 + -0.9 5,915,623 + PFLU_RS26460 0.23 +1.2 5,915,623 + PFLU_RS26460 0.23 +0.3 5,915,623 + PFLU_RS26460 0.23 -0.9 5,915,623 + PFLU_RS26460 0.23 +0.9 5,915,624 - PFLU_RS26460 0.23 +1.4 5,915,624 - PFLU_RS26460 0.23 +2.0 5,915,624 - PFLU_RS26460 0.23 +0.5 5,915,769 + PFLU_RS26460 0.54 +0.2 5,915,770 - PFLU_RS26460 0.54 +0.6 5,915,770 - PFLU_RS26460 0.54 +1.5 5,915,770 - PFLU_RS26460 0.54 +0.8 5,915,770 - PFLU_RS26460 0.54 +1.0 5,915,770 - PFLU_RS26460 0.54 -0.7 5,915,788 + PFLU_RS26460 0.58 +0.8 5,915,789 - PFLU_RS26460 0.58 -0.1 5,915,853 + PFLU_RS26460 0.71 +0.9 5,915,853 + PFLU_RS26460 0.71 +0.7 5,915,854 - PFLU_RS26460 0.71 +1.3 5,915,854 - PFLU_RS26460 0.71 +1.3 5,915,859 + PFLU_RS26460 0.73 +0.1 5,915,859 + PFLU_RS26460 0.73 +1.2 5,915,859 + PFLU_RS26460 0.73 +1.3 5,915,859 + PFLU_RS26460 0.73 +0.5 5,915,859 + PFLU_RS26460 0.73 +0.6 5,915,859 + PFLU_RS26460 0.73 +0.6 5,915,859 + PFLU_RS26460 0.73 -0.2 5,915,859 + PFLU_RS26460 0.73 -1.0 5,915,860 - PFLU_RS26460 0.73 +1.5 5,915,860 - PFLU_RS26460 0.73 -0.8 5,915,860 - PFLU_RS26460 0.73 +1.9 5,915,860 - PFLU_RS26460 0.73 +1.5 5,915,891 - PFLU_RS26460 0.79 -0.7 5,915,910 + PFLU_RS26460 0.83 +0.5 5,915,911 - PFLU_RS26460 0.83 -0.7 5,915,911 - PFLU_RS26460 0.83 +0.6 5,915,928 + PFLU_RS26460 0.87 +1.0 5,915,928 + PFLU_RS26460 0.87 +0.7 5,915,928 + PFLU_RS26460 0.87 +1.3 5,915,928 + PFLU_RS26460 0.87 -0.2 5,915,928 + PFLU_RS26460 0.87 +0.7 5,915,928 + PFLU_RS26460 0.87 -0.6 5,915,929 - PFLU_RS26460 0.87 +2.1 5,915,946 + -0.6 5,915,946 + +0.6 5,915,946 + +0.2 5,915,946 + -0.9 5,915,946 + +0.3 5,915,946 + -0.0 5,915,946 + +1.2 5,915,947 - -0.3 5,915,947 - +0.1 5,915,947 - -0.5 5,915,947 - +1.1 5,915,947 - +0.5 5,915,947 - -1.0 5,915,947 - +0.9 5,915,947 - +1.2 5,915,947 - +0.1 5,915,947 - +0.2 5,915,947 - -0.9 5,915,947 - -1.6 5,915,949 + +1.7 5,915,949 + +0.1 5,915,950 - +0.8 5,915,950 - +1.2 5,916,038 + +0.3 5,916,065 - -0.7 5,916,153 + -1.8 5,916,153 + +0.2 5,916,154 - +1.1 5,916,325 + PFLU_RS26465 0.29 +0.0 5,916,325 + PFLU_RS26465 0.29 +0.4 5,916,325 + PFLU_RS26465 0.29 +0.7 5,916,326 - PFLU_RS26465 0.29 -0.4 5,916,326 - PFLU_RS26465 0.29 +0.2 5,916,326 - PFLU_RS26465 0.29 -0.4 5,916,435 + PFLU_RS26465 0.44 -1.3 5,916,435 + PFLU_RS26465 0.44 -1.7 5,916,604 + PFLU_RS26465 0.67 -0.4 5,916,605 - PFLU_RS26465 0.67 +2.4 5,916,714 + PFLU_RS26465 0.81 +2.4 5,916,714 + PFLU_RS26465 0.81 +0.8 5,916,714 + PFLU_RS26465 0.81 -2.7 5,916,714 + PFLU_RS26465 0.81 +0.1 5,916,714 + PFLU_RS26465 0.81 -0.4 5,916,714 + PFLU_RS26465 0.81 -0.3 5,916,714 + PFLU_RS26465 0.81 +0.3 5,916,714 + PFLU_RS26465 0.81 -0.5 5,916,714 + PFLU_RS26465 0.81 +1.7 5,916,714 + PFLU_RS26465 0.81 +0.1 5,916,714 + PFLU_RS26465 0.81 -0.3 5,916,714 + PFLU_RS26465 0.81 +0.8 5,916,714 + PFLU_RS26465 0.81 -0.1 5,916,714 + PFLU_RS26465 0.81 +0.2 5,916,714 + PFLU_RS26465 0.81 +0.2 5,916,714 + PFLU_RS26465 0.81 -0.6 5,916,714 + PFLU_RS26465 0.81 -0.1 5,916,714 + PFLU_RS26465 0.81 +1.6 5,916,714 + PFLU_RS26465 0.81 -1.6 5,916,715 - PFLU_RS26465 0.81 +0.7 5,916,715 - PFLU_RS26465 0.81 +1.9 5,916,715 - PFLU_RS26465 0.81 -0.4 5,916,715 - PFLU_RS26465 0.81 +0.9 5,916,715 - PFLU_RS26465 0.81 -0.4 5,916,715 - PFLU_RS26465 0.81 -0.5 5,916,715 - PFLU_RS26465 0.81 +0.1 5,916,715 - PFLU_RS26465 0.81 +0.9 5,916,715 - PFLU_RS26465 0.81 +0.2 5,916,715 - PFLU_RS26465 0.81 -0.6 5,916,715 - PFLU_RS26465 0.81 -0.3 5,916,715 - PFLU_RS26465 0.81 -1.3 5,916,715 - PFLU_RS26465 0.81 -0.2 5,916,715 - PFLU_RS26465 0.81 +0.7 5,916,715 - PFLU_RS26465 0.81 +0.1 5,916,715 - PFLU_RS26465 0.81 +0.9 5,916,715 - PFLU_RS26465 0.81 +0.0 5,916,715 - PFLU_RS26465 0.81 -0.0 5,916,715 - PFLU_RS26465 0.81 -0.1 5,916,717 + PFLU_RS26465 0.82 -0.8 5,916,718 - PFLU_RS26465 0.82 +0.3 5,916,865 + +0.1 5,916,866 - -1.3 5,916,866 - -0.4 5,916,866 - -0.4 5,916,866 - -1.7 5,916,876 + +1.9 5,916,913 + -2.0 5,916,913 + +0.7 5,916,913 + -1.9 5,916,913 + +0.4 5,916,913 + -0.1 5,916,913 + +0.0 5,916,913 + +1.1 5,916,914 - +0.6 5,916,914 - +0.0 5,916,914 - +0.1 5,916,914 - +1.5 5,916,914 - -0.6 5,916,914 - +1.4 5,916,914 - +0.7 5,916,917 + -0.7 5,916,918 - -0.8 5,916,918 - +0.5 5,916,918 - +1.4 5,916,928 + +1.0 5,916,928 + +1.4 5,916,929 - -0.1 5,916,961 + +1.6 5,916,971 + +0.2
Or see this region's nucleotide sequence