Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26440

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,912,167	+		PFLU_RS26430	0.82	-0.2
5,912,224	+		PFLU_RS26430	0.88	-0.3
5,912,224	+		PFLU_RS26430	0.88	+0.6
5,912,251	+				+1.0
5,912,251	+				+0.8
5,912,251	+				+0.0
5,912,252	-				+0.3
5,912,252	-				-0.6
5,912,252	-				-0.3
5,912,252	-				-0.1
5,912,252	-				+0.7
5,912,252	-				-0.7
5,912,252	-				+1.1
5,912,272	+				+0.9
5,912,272	+				+0.3
5,912,272	+				-0.7
5,912,272	+				-0.3
5,912,272	+				-1.4
5,912,272	+				+0.5
5,912,272	+				-0.1
5,912,272	+				+0.3
5,912,272	+				+0.5
5,912,272	+				+0.0
5,912,272	+				+0.9
5,912,272	+				+0.6
5,912,272	+				+1.1
5,912,272	+				-0.7
5,912,272	+				+0.8
5,912,272	+				-0.2
5,912,272	+				-0.4
5,912,272	+				-0.4
5,912,272	+				-0.6
5,912,272	+				+0.2
5,912,273	-				+1.3
5,912,273	-				+0.4
5,912,273	-				+0.6
5,912,273	-				-0.6
5,912,273	-				+0.6
5,912,273	-				-0.4
5,912,273	-				-0.3
5,912,273	-				+0.0
5,912,273	-				-0.7
5,912,273	-				+0.4
5,912,273	-				+0.1
5,912,302	-				+0.8
5,912,350	+				-0.3
5,912,350	+				-0.6
5,912,350	+				-0.8
5,912,350	+				-0.5
5,912,350	+				+0.4
5,912,351	-				+0.6
5,912,351	-				-0.6
5,912,351	-				+0.4
5,912,351	-				-0.8
5,912,351	-				+1.1
5,912,351	-				+0.4
5,912,351	-				+0.3
5,912,359	+				+1.4
5,912,359	+				-1.9
5,912,359	+				-1.7
5,912,359	+				+0.9
5,912,360	-				-0.6
5,912,360	-				+0.5
5,912,360	-				+0.2
5,912,360	-				-0.2
5,912,365	-				+0.5
5,912,386	+				+0.8
5,912,386	+				+0.1
5,912,386	+				+0.7
5,912,386	+				-0.5
5,912,386	+				+0.9
5,912,386	+				+0.2
5,912,387	-				-0.3
5,912,404	+				-0.1
5,912,416	-				+0.5
5,912,416	-				+1.0
5,912,416	-				-0.3
5,912,436	-				-0.3
5,912,444	+				-1.7
5,912,444	+				-0.3
5,912,445	-				+0.2
5,912,446	+				-1.1
5,912,446	+				+0.6
5,912,485	-				-0.1
5,912,485	-				+0.0
5,912,497	+				+0.1
5,912,497	+				+0.1
5,912,497	+				+0.3
5,912,498	-				-0.4
5,912,498	-				+0.2
5,912,498	-				-0.1
5,912,505	+				-0.5
5,912,505	+				-0.9
5,912,505	+				-1.1
5,912,506	-				+0.2
5,912,506	-				+0.9
5,912,506	-				-0.6
5,912,506	-				-0.3
5,912,545	+		PFLU_RS26435	0.12	+0.1
5,912,545	+		PFLU_RS26435	0.12	-0.1
5,912,546	-		PFLU_RS26435	0.13	+0.1
5,912,546	-		PFLU_RS26435	0.13	-1.0
5,912,725	+		PFLU_RS26435	0.51	-0.0
5,912,725	+		PFLU_RS26435	0.51	+0.9
5,912,725	+		PFLU_RS26435	0.51	+0.4
5,912,725	+		PFLU_RS26435	0.51	-2.7
5,912,725	+		PFLU_RS26435	0.51	-0.8
5,912,726	-		PFLU_RS26435	0.52	-0.7
5,912,834	+		PFLU_RS26435	0.75	+0.5
5,912,834	+		PFLU_RS26435	0.75	-0.7
5,912,835	-		PFLU_RS26435	0.75	+0.6
5,912,835	-		PFLU_RS26435	0.75	-0.2
5,912,835	-		PFLU_RS26435	0.75	+0.4
5,912,835	-		PFLU_RS26435	0.75	+1.5
5,912,835	-		PFLU_RS26435	0.75	+0.4
5,912,835	-		PFLU_RS26435	0.75	+0.9
5,912,835	-		PFLU_RS26435	0.75	+0.4
5,912,835	-		PFLU_RS26435	0.75	-0.9
5,912,835	-		PFLU_RS26435	0.75	+0.8
5,912,835	-		PFLU_RS26435	0.75	-1.2
5,912,835	-		PFLU_RS26435	0.75	-0.6
5,912,835	-		PFLU_RS26435	0.75	+0.4
5,912,835	-		PFLU_RS26435	0.75	+1.3
5,912,835	-		PFLU_RS26435	0.75	+0.6
5,912,835	-		PFLU_RS26435	0.75	-0.5
5,912,940	+				+1.8
5,912,941	-				+0.6
5,912,988	+				-2.0
5,912,989	-				-1.8
5,912,989	-				-1.3
5,913,182	+		PFLU_RS26440	0.54	+1.3
5,913,182	+		PFLU_RS26440	0.54	-2.6
5,913,182	+		PFLU_RS26440	0.54	+1.6
5,913,194	+		PFLU_RS26440	0.59	+0.6
5,913,293	+				+0.5
5,913,293	+				+0.2
5,913,293	+				+0.2
5,913,294	-				+1.2
5,913,294	-				+0.3
5,913,294	-				-0.7
5,913,294	-				-0.2
5,913,314	+				+0.9
5,913,314	+				+1.2
5,913,314	+				-0.4
5,913,314	+				+0.5
5,913,314	+				+0.1
5,913,315	-				-1.1
5,913,315	-				+0.4
5,913,315	-				+1.2
5,913,324	+				+0.3
5,913,324	+				+0.5
5,913,324	+				-0.6
5,913,324	+				+0.3
5,913,324	+				+0.9
5,913,324	+				-0.1
5,913,324	+				+0.9
5,913,324	+				+1.7
5,913,324	+				+0.8
5,913,324	+				+0.5
5,913,324	+				-1.6
5,913,324	+				-1.9
5,913,324	+				-1.8
5,913,324	+				-0.1
5,913,324	+				-0.4
5,913,324	+				+0.7
5,913,325	-				+1.1
5,913,325	-				+1.0
5,913,325	-				+0.1
5,913,325	-				-0.6
5,913,325	-				+0.7
5,913,325	-				+0.7
5,913,325	-				-0.7
5,913,325	-				-0.5
5,913,325	-				-0.4
5,913,325	-				-0.6
5,913,325	-				+1.2
5,913,325	-				-0.4
5,913,325	-				-1.8
5,913,325	-				-0.4
5,913,325	-				+0.1
5,913,325	-				+1.2
5,913,325	-				-0.8
5,913,325	-				-1.8
5,913,325	-				+0.4
5,913,327	+				-1.5
5,913,327	+				-0.4
5,913,327	+				+1.4
5,913,327	+				+0.5
5,913,327	+				-1.6
5,913,327	+				+0.4
5,913,327	+				+0.4
5,913,328	-				+1.2
5,913,328	-				-0.6
5,913,328	-				+0.3
5,913,328	-				+0.5
5,913,328	-				-2.1
5,913,328	-				+0.7
5,913,328	-				-0.1
5,913,328	-				+0.0
5,913,328	-				+0.5
5,913,328	-				-0.4
5,913,328	-				-0.4
5,913,330	+				-0.6
5,913,330	+				-0.1
5,913,330	+				-0.4
5,913,331	-				-0.5
5,913,331	-				+1.3
5,913,337	+				-2.0
5,913,337	+				+0.6
5,913,338	-				+0.2
5,913,338	-				+0.3
5,913,338	-				-0.3
5,913,338	-				-0.5
5,913,349	-		PFLU_RS26445	0.10	+1.1
5,913,408	+		PFLU_RS26445	0.20	+1.3
5,913,409	-		PFLU_RS26445	0.21	+0.3
5,913,409	-		PFLU_RS26445	0.21	-0.7
5,913,517	+		PFLU_RS26445	0.40	+1.2
5,913,517	+		PFLU_RS26445	0.40	-1.3
5,913,517	+		PFLU_RS26445	0.40	+0.8
5,913,517	+		PFLU_RS26445	0.40	+0.3
5,913,517	+		PFLU_RS26445	0.40	+0.2
5,913,517	+		PFLU_RS26445	0.40	+0.6
5,913,517	+		PFLU_RS26445	0.40	+0.1
5,913,517	+		PFLU_RS26445	0.40	+0.3
5,913,518	-		PFLU_RS26445	0.40	+0.6
5,913,518	-		PFLU_RS26445	0.40	-0.3
5,913,518	-		PFLU_RS26445	0.40	-0.1
5,913,518	-		PFLU_RS26445	0.40	-0.3
5,913,518	-		PFLU_RS26445	0.40	+0.5
5,913,518	-		PFLU_RS26445	0.40	-1.9
5,913,518	-		PFLU_RS26445	0.40	-0.3
5,913,531	+		PFLU_RS26445	0.42	+0.1
5,913,531	+		PFLU_RS26445	0.42	-0.2
5,913,532	-		PFLU_RS26445	0.42	-1.5
5,913,532	-		PFLU_RS26445	0.42	+1.0
5,913,541	+		PFLU_RS26445	0.44	+1.9
5,913,541	+		PFLU_RS26445	0.44	-0.8
5,913,541	+		PFLU_RS26445	0.44	+1.4
5,913,542	-		PFLU_RS26445	0.44	-0.1
5,913,576	+		PFLU_RS26445	0.50	+0.1
5,913,576	+		PFLU_RS26445	0.50	+0.4
5,913,576	+		PFLU_RS26445	0.50	-0.1
5,913,576	+		PFLU_RS26445	0.50	-0.8
5,913,576	+		PFLU_RS26445	0.50	-2.1
5,913,577	-		PFLU_RS26445	0.50	-3.0
5,913,577	-		PFLU_RS26445	0.50	+0.3
5,913,577	-		PFLU_RS26445	0.50	+0.5
5,913,577	-		PFLU_RS26445	0.50	+0.7
5,913,577	-		PFLU_RS26445	0.50	+0.2
5,913,612	+		PFLU_RS26445	0.56	-0.1
5,913,612	+		PFLU_RS26445	0.56	-0.9
5,913,612	+		PFLU_RS26445	0.56	+1.1
5,913,612	+		PFLU_RS26445	0.56	-0.6
5,913,613	-		PFLU_RS26445	0.57	-0.7
5,913,613	-		PFLU_RS26445	0.57	-0.1
5,913,613	-		PFLU_RS26445	0.57	-0.3
5,913,676	+		PFLU_RS26445	0.68	+0.6
5,913,676	+		PFLU_RS26445	0.68	+0.2
5,913,676	+		PFLU_RS26445	0.68	+1.2
5,913,677	+		PFLU_RS26445	0.68	+0.1
5,913,677	-		PFLU_RS26445	0.68	-1.4
5,913,677	-		PFLU_RS26445	0.68	-0.4
5,913,677	-		PFLU_RS26445	0.68	+0.1
5,913,683	+		PFLU_RS26445	0.69	+0.3
5,913,683	+		PFLU_RS26445	0.69	-0.4
5,913,683	+		PFLU_RS26445	0.69	+0.0
5,913,683	+		PFLU_RS26445	0.69	+0.0
5,913,683	+		PFLU_RS26445	0.69	-2.3
5,913,683	+		PFLU_RS26445	0.69	+0.3
5,913,683	+		PFLU_RS26445	0.69	+1.3
5,913,684	-		PFLU_RS26445	0.69	+0.2
5,913,684	-		PFLU_RS26445	0.69	-1.0
5,913,684	-		PFLU_RS26445	0.69	+0.2
5,913,684	-		PFLU_RS26445	0.69	+0.5
5,913,684	-		PFLU_RS26445	0.69	-0.1
5,913,699	+		PFLU_RS26445	0.72	+0.6
5,913,742	+		PFLU_RS26445	0.79	-0.9
5,913,742	+		PFLU_RS26445	0.79	+0.1
5,913,742	+		PFLU_RS26445	0.79	+2.2
5,913,742	+		PFLU_RS26445	0.79	-0.7
5,913,742	+		PFLU_RS26445	0.79	+0.4
5,913,742	+		PFLU_RS26445	0.79	+0.4
5,913,742	+		PFLU_RS26445	0.79	+0.7
5,913,742	+		PFLU_RS26445	0.79	+0.2
5,913,742	+		PFLU_RS26445	0.79	+0.3
5,913,742	+		PFLU_RS26445	0.79	-0.4
5,913,742	+		PFLU_RS26445	0.79	-1.1
5,913,743	-		PFLU_RS26445	0.80	+0.1
5,913,743	-		PFLU_RS26445	0.80	+0.9
5,913,743	-		PFLU_RS26445	0.80	-0.8
5,913,743	-		PFLU_RS26445	0.80	+0.4
5,913,743	-		PFLU_RS26445	0.80	-0.9
5,913,743	-		PFLU_RS26445	0.80	-0.9
5,913,743	-		PFLU_RS26445	0.80	-0.1
5,913,743	-		PFLU_RS26445	0.80	+1.0
5,913,743	-		PFLU_RS26445	0.80	+2.9
5,913,743	-		PFLU_RS26445	0.80	-0.1
5,913,743	-		PFLU_RS26445	0.80	+0.9
5,913,743	-		PFLU_RS26445	0.80	+1.1
5,913,787	+		PFLU_RS26445	0.87	-0.6
5,913,787	+		PFLU_RS26445	0.87	+0.0
5,913,787	+		PFLU_RS26445	0.87	+0.1
5,913,787	+		PFLU_RS26445	0.87	+0.2
5,913,787	+		PFLU_RS26445	0.87	+0.5
5,913,787	+		PFLU_RS26445	0.87	+1.5
5,913,788	-		PFLU_RS26445	0.87	-2.3
5,913,788	-		PFLU_RS26445	0.87	+0.3
5,913,788	-		PFLU_RS26445	0.87	+0.8
5,913,788	-		PFLU_RS26445	0.87	-0.2
5,913,837	+				-2.3
5,913,837	+				-1.4
5,913,837	+				+0.5
5,913,837	+				+0.9
5,913,837	+				+0.8
5,913,837	+				-0.6
5,913,837	+				-1.1
5,913,838	-				-2.6
5,913,838	-				-0.3
5,913,864	+				-0.4
5,913,865	-				-1.8
5,913,873	+				+0.8
5,913,877	+				-0.5
5,913,877	+				-0.4
5,913,877	+				+0.7
5,913,877	+				-0.4
5,913,877	+				-0.1
5,913,877	+				+0.9
5,913,877	+				-0.3
5,913,878	-				+0.6
5,913,878	-				+0.2
5,913,878	-				+0.2
5,913,878	-				+0.1
5,913,878	-				-1.6
5,913,878	-				-0.3
5,913,878	-				-0.6
5,913,878	-				+0.7
5,913,896	+				+1.4
5,913,896	+				+0.2
5,913,896	+				-0.8
5,913,896	+				-0.8
5,913,896	+				-1.0
5,913,896	+				+1.9
5,913,896	+				+0.5
5,913,896	+				-1.5
5,913,896	+				+0.2
5,913,897	-				+0.2
5,913,897	-				-0.4
5,913,897	-				+1.1
5,913,897	-				+0.7
5,913,897	-				-0.3
5,913,897	-				+1.3
5,913,897	-				-2.2
5,913,916	+				-0.4
5,913,916	+				+0.2
5,913,916	+				-0.6
5,913,916	+				+0.2
5,913,916	+				-0.6
5,913,916	+				-0.6
5,913,916	+				+1.0
5,913,916	+				-0.3
5,913,916	+				-0.1
5,913,916	+				-0.5
5,913,916	+				+0.7
5,913,917	-				+0.7
5,913,917	-				-0.3
5,913,917	-				-1.0
5,913,917	-				+0.4
5,913,917	-				+0.1
5,913,917	-				+0.3
5,913,917	-				+0.9
5,913,917	-				+0.2
5,913,917	-				-0.0
5,913,917	-				+1.2
5,913,948	+				-1.0
5,913,948	+				-0.3
5,913,949	-				-1.3
5,913,949	-				-1.9
5,913,949	-				-0.4
5,913,949	-				-0.0
5,913,970	+				-1.6
5,913,970	+				-0.3
5,914,090	+				+0.2
5,914,090	+				-1.8
5,914,090	+				-0.7
5,914,091	-				-0.2
5,914,091	-				-1.4
5,914,091	-				+0.8
5,914,094	+				+0.7
5,914,094	+				-1.2
5,914,094	+				+1.4
5,914,094	+				+0.8
5,914,094	+				-1.8
5,914,095	-				-0.1
5,914,095	-				+1.2
5,914,095	-				-1.5
5,914,095	-				-1.4
5,914,095	-				-0.9
5,914,095	-				-1.9
5,914,095	-				-1.2
5,914,095	-				+0.8
5,914,095	-				-1.0
5,914,095	-				+0.4
5,914,095	-				+0.9
5,914,095	-				-0.6
5,914,095	-				-0.3
5,914,149	+				-0.7
5,914,150	-				-2.5
5,914,152	+				-0.6
5,914,152	+				-0.7
5,914,152	+				-0.5
5,914,152	+				+1.2
5,914,153	-				-1.5
5,914,153	-				+0.8
5,914,153	-				+0.4
5,914,153	-				-0.6
5,914,165	+				-1.0
5,914,165	+				+0.0
5,914,165	+				+0.6
5,914,166	-				+0.9
5,914,166	-				+0.2
5,914,166	-				+1.6
5,914,185	+				-0.1
5,914,204	+				+0.4
5,914,215	+				+1.1
5,914,216	-				-0.1
5,914,216	-				+0.6
5,914,283	+				+1.2
5,914,283	+				-0.3
5,914,283	+				-1.0
5,914,284	-				-1.0