Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25645

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,725,604	+				-2.5
5,725,604	+				-2.4
5,725,605	-				-3.3
5,725,666	+		PFLU_RS25640	0.16	-3.6
5,725,667	-		PFLU_RS25640	0.16	-2.8
5,725,682	+		PFLU_RS25640	0.17	-2.4
5,725,682	+		PFLU_RS25640	0.17	-2.6
5,725,682	+		PFLU_RS25640	0.17	-2.4
5,725,682	+		PFLU_RS25640	0.17	-1.5
5,725,683	-		PFLU_RS25640	0.17	-2.0
5,725,747	+		PFLU_RS25640	0.24	-2.6
5,725,747	+		PFLU_RS25640	0.24	-1.9
5,725,747	+		PFLU_RS25640	0.24	-1.5
5,725,747	+		PFLU_RS25640	0.24	-3.2
5,725,747	+		PFLU_RS25640	0.24	-0.3
5,725,748	-		PFLU_RS25640	0.24	-2.7
5,725,748	-		PFLU_RS25640	0.24	-3.4
5,725,748	-		PFLU_RS25640	0.24	-1.4
5,725,748	-		PFLU_RS25640	0.24	-2.6
5,725,756	+		PFLU_RS25640	0.25	-2.0
5,725,780	+		PFLU_RS25640	0.27	-2.0
5,725,780	+		PFLU_RS25640	0.27	-2.9
5,725,780	+		PFLU_RS25640	0.27	-4.0
5,725,780	+		PFLU_RS25640	0.27	-3.3
5,725,780	+		PFLU_RS25640	0.27	-2.0
5,725,780	+		PFLU_RS25640	0.27	-1.6
5,725,780	+		PFLU_RS25640	0.27	-3.1
5,725,781	-		PFLU_RS25640	0.27	-3.0
5,725,781	-		PFLU_RS25640	0.27	-3.6
5,725,781	-		PFLU_RS25640	0.27	-0.8
5,725,781	-		PFLU_RS25640	0.27	-3.2
5,725,781	-		PFLU_RS25640	0.27	-2.8
5,725,781	-		PFLU_RS25640	0.27	+1.2
5,725,781	-		PFLU_RS25640	0.27	-2.5
5,725,807	+		PFLU_RS25640	0.30	-2.0
5,725,807	+		PFLU_RS25640	0.30	-0.1
5,725,807	+		PFLU_RS25640	0.30	-3.9
5,725,807	+		PFLU_RS25640	0.30	-1.9
5,725,807	+		PFLU_RS25640	0.30	-2.4
5,725,807	+		PFLU_RS25640	0.30	-2.9
5,725,807	+		PFLU_RS25640	0.30	-2.2
5,725,808	-		PFLU_RS25640	0.30	-3.0
5,725,808	-		PFLU_RS25640	0.30	-3.8
5,725,808	-		PFLU_RS25640	0.30	-2.4
5,725,808	-		PFLU_RS25640	0.30	-1.2
5,725,808	-		PFLU_RS25640	0.30	-0.8
5,725,808	-		PFLU_RS25640	0.30	-1.8
5,725,808	-		PFLU_RS25640	0.30	-0.8
5,725,808	-		PFLU_RS25640	0.30	-2.3
5,725,808	-		PFLU_RS25640	0.30	-3.1
5,725,808	-		PFLU_RS25640	0.30	-1.0
5,725,808	-		PFLU_RS25640	0.30	-1.5
5,725,808	-		PFLU_RS25640	0.30	-2.5
5,725,808	-		PFLU_RS25640	0.30	-2.6
5,725,808	-		PFLU_RS25640	0.30	-2.3
5,725,808	-		PFLU_RS25640	0.30	-3.0
5,725,808	-		PFLU_RS25640	0.30	-1.4
5,725,852	+		PFLU_RS25640	0.34	-2.2
5,725,852	+		PFLU_RS25640	0.34	-1.4
5,725,853	-		PFLU_RS25640	0.34	-0.2
5,725,853	-		PFLU_RS25640	0.34	-3.2
5,725,933	-		PFLU_RS25640	0.42	-2.9
5,726,023	+		PFLU_RS25640	0.51	-1.9
5,726,024	-		PFLU_RS25640	0.51	-2.1
5,726,024	-		PFLU_RS25640	0.51	-1.4
5,726,066	-		PFLU_RS25640	0.55	-1.5
5,726,175	+		PFLU_RS25640	0.66	-1.0
5,726,175	+		PFLU_RS25640	0.66	-1.4
5,726,175	+		PFLU_RS25640	0.66	-1.6
5,726,176	-		PFLU_RS25640	0.66	-1.2
5,726,176	-		PFLU_RS25640	0.66	-3.0
5,726,176	-		PFLU_RS25640	0.66	-3.4
5,726,176	-		PFLU_RS25640	0.66	-3.1
5,726,176	-		PFLU_RS25640	0.66	-1.6
5,726,176	-		PFLU_RS25640	0.66	-3.1
5,726,185	+		PFLU_RS25640	0.67	-3.4
5,726,185	+		PFLU_RS25640	0.67	-2.3
5,726,186	-		PFLU_RS25640	0.67	-1.2
5,726,186	-		PFLU_RS25640	0.67	-1.4
5,726,257	+		PFLU_RS25640	0.74	-0.2
5,726,257	+		PFLU_RS25640	0.74	-3.4
5,726,257	+		PFLU_RS25640	0.74	-1.6
5,726,257	+		PFLU_RS25640	0.74	-3.3
5,726,257	+		PFLU_RS25640	0.74	-2.8
5,726,257	+		PFLU_RS25640	0.74	-1.0
5,726,257	+		PFLU_RS25640	0.74	-2.4
5,726,258	-		PFLU_RS25640	0.74	-3.1
5,726,258	-		PFLU_RS25640	0.74	-1.5
5,726,258	-		PFLU_RS25640	0.74	-1.8
5,726,382	-		PFLU_RS25640	0.86	-2.2
5,726,382	-		PFLU_RS25640	0.86	-2.6
5,726,509	+				-2.8
5,726,509	+				-3.3
5,726,509	+				-1.7
5,726,510	-				-3.0
5,726,513	-				-2.8
5,726,533	+				-2.0
5,726,533	+				-0.8
5,726,533	+				-1.2
5,726,533	+				-1.1
5,726,533	+				-1.7
5,726,533	+				-1.5
5,726,533	+				-3.3
5,726,533	+				-1.6
5,726,533	+				-2.1
5,726,534	-				-1.8
5,726,534	-				-3.3
5,726,534	-				-3.7
5,726,534	-				-2.2
5,726,534	-				-2.3
5,726,534	-				-1.9
5,726,534	-				-3.1
5,726,534	-				-1.8
5,726,534	-				-2.2
5,726,534	-				-1.2
5,726,534	-				-2.5
5,726,534	-				-2.7
5,726,534	-				-2.4
5,726,534	-				-1.2
5,726,534	-				-1.7
5,726,534	-				-2.4
5,726,534	-				-1.0
5,726,534	-				-0.7
5,726,534	-				-3.1
5,726,534	-				-0.6
5,726,534	-				+0.1
5,726,534	-				-1.7
5,726,534	-				-2.0
5,726,535	+				-2.9
5,726,535	+				-1.4
5,726,535	+				-1.8
5,726,535	+				-1.6
5,726,535	+				-2.3
5,726,535	+				-1.9
5,726,535	+				-3.3
5,726,535	+				-1.9
5,726,535	+				-2.2
5,726,535	+				-3.6
5,726,535	+				-3.3
5,726,535	+				-2.5
5,726,535	+				-2.2
5,726,535	+				-2.9
5,726,535	+				-1.2
5,726,535	+				-1.9
5,726,535	+				-2.4
5,726,535	+				-3.3
5,726,535	+				-0.5
5,726,535	+				-2.3
5,726,535	+				-2.0
5,726,535	+				-2.2
5,726,535	+				-1.8
5,726,535	+				-2.5
5,726,535	+				-2.6
5,726,535	+				-1.4
5,726,536	-				-0.3
5,726,536	-				-0.6
5,726,536	-				-1.7
5,726,536	-				-1.2
5,726,536	-				-1.9
5,726,536	-				-0.6
5,726,536	-				-0.4
5,726,536	-				+0.4
5,726,536	-				-2.9
5,726,536	-				-0.1
5,726,536	-				-0.7
5,726,536	-				-0.8
5,726,536	-				-0.4
5,726,536	-				-3.1
5,726,536	-				-0.4
5,726,536	-				-1.2
5,726,536	-				+0.1
5,726,536	-				-0.8
5,726,536	-				-0.8
5,726,536	-				+0.0
5,726,536	-				-1.8
5,726,536	-				-1.2
5,726,536	-				-2.4
5,726,536	-				-1.4
5,726,536	-				+0.7
5,726,536	-				-2.4
5,726,536	-				-0.2
5,726,536	-				-1.9
5,726,536	-				-1.8
5,726,537	+				-1.2
5,726,537	+				-1.2
5,726,537	+				-0.0
5,726,537	+				-3.5
5,726,537	+				-1.9
5,726,538	-				-2.3
5,726,538	-				-1.8
5,726,538	-				-3.3
5,726,538	-				-0.4
5,726,538	-				+0.1
5,726,538	-				+0.3
5,726,538	-				-1.9
5,726,538	-				-2.1
5,726,538	-				-0.3
5,726,538	-				-1.8
5,726,538	-				-1.4
5,726,549	-				-1.2
5,726,561	+				-2.3
5,726,562	-				-0.2
5,726,562	-				-0.5
5,726,571	+				-2.0
5,726,583	-				-1.4
5,726,583	-				-2.2
5,726,622	-		PFLU_RS25645	0.11	-0.4
5,726,622	-		PFLU_RS25645	0.11	+0.8
5,726,681	-		PFLU_RS25645	0.23	-1.0
5,726,702	-		PFLU_RS25645	0.27	+0.8
5,726,702	-		PFLU_RS25645	0.27	-1.2
5,726,702	-		PFLU_RS25645	0.27	-0.2
5,726,704	-		PFLU_RS25645	0.27	+0.8
5,726,704	-		PFLU_RS25645	0.27	+0.8
5,727,066	-				-1.6
5,727,066	-				-1.5
5,727,066	-				-0.2
5,727,066	-				-0.2
5,727,066	-				-1.9
5,727,066	-				+0.8
5,727,070	-				-2.0
5,727,070	-				-2.9
5,727,070	-				-0.8
5,727,070	-				-2.6
5,727,070	-				-1.9
5,727,070	-				-2.4
5,727,070	-				-2.4
5,727,102	+				+0.2
5,727,102	+				+0.2
5,727,102	+				-1.0
5,727,103	-				+0.2
5,727,103	-				-1.9
5,727,103	-				-0.8