Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25510

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,692,619	+		PFLU_RS25505	0.18	+1.0
5,692,619	+		PFLU_RS25505	0.18	+0.4
5,692,619	+		PFLU_RS25505	0.18	+1.9
5,692,619	+		PFLU_RS25505	0.18	+0.0
5,692,619	+		PFLU_RS25505	0.18	+0.5
5,692,619	+		PFLU_RS25505	0.18	+0.9
5,692,619	+		PFLU_RS25505	0.18	+0.9
5,692,619	+		PFLU_RS25505	0.18	-1.1
5,692,619	+		PFLU_RS25505	0.18	+0.3
5,692,620	-		PFLU_RS25505	0.18	-0.2
5,692,620	-		PFLU_RS25505	0.18	-0.4
5,692,620	-		PFLU_RS25505	0.18	-2.3
5,692,620	-		PFLU_RS25505	0.18	-0.5
5,692,620	-		PFLU_RS25505	0.18	-0.1
5,692,620	-		PFLU_RS25505	0.18	+1.6
5,692,620	-		PFLU_RS25505	0.18	+1.5
5,692,709	+		PFLU_RS25505	0.27	+0.3
5,692,709	+		PFLU_RS25505	0.27	-0.5
5,692,709	+		PFLU_RS25505	0.27	-0.4
5,692,709	+		PFLU_RS25505	0.27	+0.3
5,692,709	+		PFLU_RS25505	0.27	+0.4
5,692,710	-		PFLU_RS25505	0.27	+1.0
5,692,758	+		PFLU_RS25505	0.32	-2.0
5,692,758	+		PFLU_RS25505	0.32	-0.3
5,692,758	+		PFLU_RS25505	0.32	-2.2
5,692,758	+		PFLU_RS25505	0.32	-0.2
5,692,759	-		PFLU_RS25505	0.32	+0.8
5,692,759	-		PFLU_RS25505	0.32	+1.2
5,692,759	-		PFLU_RS25505	0.32	-0.0
5,692,759	-		PFLU_RS25505	0.32	+0.1
5,692,759	-		PFLU_RS25505	0.32	-0.1
5,692,759	-		PFLU_RS25505	0.32	-0.4
5,692,759	-		PFLU_RS25505	0.32	-0.4
5,692,780	-		PFLU_RS25505	0.34	+1.5
5,692,780	-		PFLU_RS25505	0.34	+0.2
5,692,780	-		PFLU_RS25505	0.34	+0.4
5,692,815	+		PFLU_RS25505	0.37	-0.0
5,692,816	-		PFLU_RS25505	0.37	+0.6
5,692,843	-		PFLU_RS25505	0.40	+1.2
5,692,854	-		PFLU_RS25505	0.41	+1.1
5,692,854	-		PFLU_RS25505	0.41	+0.7
5,692,869	+		PFLU_RS25505	0.43	-0.6
5,692,895	+		PFLU_RS25505	0.45	-2.8
5,692,895	+		PFLU_RS25505	0.45	+0.3
5,692,895	+		PFLU_RS25505	0.45	-0.6
5,692,896	-		PFLU_RS25505	0.45	+0.2
5,692,970	+		PFLU_RS25505	0.53	+0.4
5,692,970	+		PFLU_RS25505	0.53	-0.4
5,692,971	-		PFLU_RS25505	0.53	-0.8
5,692,971	-		PFLU_RS25505	0.53	-1.7
5,693,033	+		PFLU_RS25505	0.59	+0.2
5,693,033	+		PFLU_RS25505	0.59	+0.8
5,693,033	+		PFLU_RS25505	0.59	-0.2
5,693,033	+		PFLU_RS25505	0.59	-0.3
5,693,033	+		PFLU_RS25505	0.59	+0.8
5,693,034	-		PFLU_RS25505	0.59	-1.4
5,693,034	-		PFLU_RS25505	0.59	+2.0
5,693,034	-		PFLU_RS25505	0.59	+0.8
5,693,034	-		PFLU_RS25505	0.59	-0.2
5,693,034	-		PFLU_RS25505	0.59	+0.8
5,693,150	+		PFLU_RS25505	0.71	+0.6
5,693,150	+		PFLU_RS25505	0.71	+0.5
5,693,150	+		PFLU_RS25505	0.71	-1.5
5,693,150	+		PFLU_RS25505	0.71	-0.6
5,693,150	+		PFLU_RS25505	0.71	-0.3
5,693,150	+		PFLU_RS25505	0.71	+0.9
5,693,151	-		PFLU_RS25505	0.71	-0.5
5,693,151	-		PFLU_RS25505	0.71	-0.8
5,693,151	-		PFLU_RS25505	0.71	+0.7
5,693,153	+		PFLU_RS25505	0.71	+0.7
5,693,153	+		PFLU_RS25505	0.71	-1.2
5,693,153	+		PFLU_RS25505	0.71	-1.3
5,693,153	+		PFLU_RS25505	0.71	-1.3
5,693,153	+		PFLU_RS25505	0.71	+0.8
5,693,153	+		PFLU_RS25505	0.71	+0.2
5,693,153	+		PFLU_RS25505	0.71	+1.6
5,693,154	-		PFLU_RS25505	0.71	+0.5
5,693,154	-		PFLU_RS25505	0.71	+0.7
5,693,154	-		PFLU_RS25505	0.71	-0.2
5,693,154	-		PFLU_RS25505	0.71	-0.5
5,693,154	-		PFLU_RS25505	0.71	+0.5
5,693,154	-		PFLU_RS25505	0.71	-0.2
5,693,154	-		PFLU_RS25505	0.71	+0.9
5,693,204	+		PFLU_RS25505	0.76	-0.6
5,693,332	+		PFLU_RS25505	0.89	+1.1
5,693,332	+		PFLU_RS25505	0.89	+0.9
5,693,332	+		PFLU_RS25505	0.89	+0.2
5,693,332	+		PFLU_RS25505	0.89	+0.5
5,693,332	+		PFLU_RS25505	0.89	+0.8
5,693,332	+		PFLU_RS25505	0.89	+1.5
5,693,332	+		PFLU_RS25505	0.89	-2.0
5,693,332	+		PFLU_RS25505	0.89	+0.2
5,693,336	+		PFLU_RS25505	0.89	-1.1
5,693,336	+		PFLU_RS25505	0.89	-0.5
5,693,337	-		PFLU_RS25505	0.89	+0.3
5,693,337	-		PFLU_RS25505	0.89	-0.8
5,693,394	+				-0.8
5,693,394	+				+0.4
5,693,395	-				+0.1
5,693,414	+				-1.2
5,693,414	+				+1.2
5,693,415	-				+1.4
5,693,437	+				-0.3
5,693,440	+				+0.3
5,693,440	+				+0.2
5,693,440	+				-0.0
5,693,440	+				-0.5
5,693,440	+				-0.4
5,693,441	-				+0.3
5,693,441	-				+0.9
5,693,441	-				+0.2
5,693,441	-				+0.2
5,693,441	-				-0.1
5,693,441	-				+0.6
5,693,441	-				+0.1
5,693,503	+				+0.6
5,693,503	+				-1.1
5,693,503	+				-0.9
5,693,504	-				+0.8
5,693,504	-				-0.0
5,693,504	-				+1.5
5,693,516	+				+0.8
5,693,773	+		PFLU_RS25510	0.18	+0.3
5,693,773	+		PFLU_RS25510	0.18	+0.6
5,693,774	-		PFLU_RS25510	0.18	+1.4
5,693,774	-		PFLU_RS25510	0.18	-0.4
5,693,812	+		PFLU_RS25510	0.21	+0.7
5,693,812	+		PFLU_RS25510	0.21	-1.3
5,693,813	-		PFLU_RS25510	0.21	-2.1
5,693,813	-		PFLU_RS25510	0.21	-0.1
5,693,819	+		PFLU_RS25510	0.21	+0.5
5,693,820	-		PFLU_RS25510	0.22	-0.2
5,693,824	+		PFLU_RS25510	0.22	-0.1
5,693,824	+		PFLU_RS25510	0.22	+2.3
5,693,824	+		PFLU_RS25510	0.22	+0.5
5,693,824	+		PFLU_RS25510	0.22	-0.0
5,693,824	+		PFLU_RS25510	0.22	+0.8
5,693,824	+		PFLU_RS25510	0.22	+1.2
5,693,824	+		PFLU_RS25510	0.22	-2.5
5,693,824	+		PFLU_RS25510	0.22	-1.7
5,693,825	-		PFLU_RS25510	0.22	-1.1
5,693,825	-		PFLU_RS25510	0.22	-0.2
5,693,825	-		PFLU_RS25510	0.22	+0.5
5,693,825	-		PFLU_RS25510	0.22	+0.2
5,693,825	-		PFLU_RS25510	0.22	+0.1
5,693,825	-		PFLU_RS25510	0.22	+1.5
5,693,866	+		PFLU_RS25510	0.25	+0.6
5,693,866	+		PFLU_RS25510	0.25	-0.2
5,693,866	+		PFLU_RS25510	0.25	+0.2
5,693,866	+		PFLU_RS25510	0.25	-0.6
5,693,866	+		PFLU_RS25510	0.25	+0.0
5,693,866	+		PFLU_RS25510	0.25	-0.0
5,693,866	+		PFLU_RS25510	0.25	+0.3
5,693,866	+		PFLU_RS25510	0.25	+0.6
5,693,866	+		PFLU_RS25510	0.25	+0.5
5,693,866	+		PFLU_RS25510	0.25	+0.3
5,693,866	+		PFLU_RS25510	0.25	-0.6
5,693,866	+		PFLU_RS25510	0.25	+0.2
5,693,867	-		PFLU_RS25510	0.25	+0.7
5,693,867	-		PFLU_RS25510	0.25	+0.7
5,693,867	-		PFLU_RS25510	0.25	+1.1
5,693,867	-		PFLU_RS25510	0.25	-0.5
5,693,867	-		PFLU_RS25510	0.25	+1.0
5,693,867	-		PFLU_RS25510	0.25	-0.5
5,693,867	-		PFLU_RS25510	0.25	+1.2
5,693,867	-		PFLU_RS25510	0.25	+1.5
5,693,867	-		PFLU_RS25510	0.25	-0.5
5,693,867	-		PFLU_RS25510	0.25	-0.7
5,694,034	+		PFLU_RS25510	0.37	+0.9
5,694,034	+		PFLU_RS25510	0.37	+0.8
5,694,034	+		PFLU_RS25510	0.37	-2.4
5,694,034	+		PFLU_RS25510	0.37	-0.2
5,694,034	+		PFLU_RS25510	0.37	+0.3
5,694,034	+		PFLU_RS25510	0.37	+0.8
5,694,035	-		PFLU_RS25510	0.37	+0.5
5,694,035	-		PFLU_RS25510	0.37	+0.6
5,694,035	-		PFLU_RS25510	0.37	+1.3
5,694,035	-		PFLU_RS25510	0.37	-1.8
5,694,035	-		PFLU_RS25510	0.37	-0.7
5,694,035	-		PFLU_RS25510	0.37	+0.6
5,694,176	+		PFLU_RS25510	0.47	+0.5
5,694,176	+		PFLU_RS25510	0.47	+2.1
5,694,244	+		PFLU_RS25510	0.52	+0.7
5,694,262	+		PFLU_RS25510	0.53	-0.6
5,694,262	+		PFLU_RS25510	0.53	+0.4
5,694,263	-		PFLU_RS25510	0.53	-2.0
5,694,343	+		PFLU_RS25510	0.59	-2.2
5,694,343	+		PFLU_RS25510	0.59	-0.5
5,694,343	+		PFLU_RS25510	0.59	+0.1
5,694,344	-		PFLU_RS25510	0.59	-0.6
5,694,344	-		PFLU_RS25510	0.59	+0.1
5,694,344	-		PFLU_RS25510	0.59	+1.0
5,694,442	+		PFLU_RS25510	0.66	-1.0
5,694,442	+		PFLU_RS25510	0.66	-0.2
5,694,442	+		PFLU_RS25510	0.66	+0.1
5,694,442	+		PFLU_RS25510	0.66	+0.3
5,694,442	+		PFLU_RS25510	0.66	+1.1
5,694,442	+		PFLU_RS25510	0.66	+2.3
5,694,443	-		PFLU_RS25510	0.66	+1.9
5,694,443	-		PFLU_RS25510	0.66	-0.3
5,694,443	-		PFLU_RS25510	0.66	-0.4
5,694,458	-		PFLU_RS25510	0.67	+0.6
5,694,458	-		PFLU_RS25510	0.67	+0.6
5,694,598	+		PFLU_RS25510	0.77	+0.6
5,694,598	+		PFLU_RS25510	0.77	+2.4
5,694,598	+		PFLU_RS25510	0.77	-0.2
5,694,598	+		PFLU_RS25510	0.77	+0.4
5,694,598	+		PFLU_RS25510	0.77	-0.6
5,694,598	+		PFLU_RS25510	0.77	-0.3
5,694,598	+		PFLU_RS25510	0.77	-0.1
5,694,598	+		PFLU_RS25510	0.77	+0.3
5,694,598	+		PFLU_RS25510	0.77	-1.2
5,694,599	-		PFLU_RS25510	0.77	+1.1
5,694,599	-		PFLU_RS25510	0.77	+0.9
5,694,599	-		PFLU_RS25510	0.77	+1.2
5,694,599	-		PFLU_RS25510	0.77	+1.0
5,694,599	-		PFLU_RS25510	0.77	+0.2
5,694,599	-		PFLU_RS25510	0.77	+0.1
5,694,763	+		PFLU_RS25510	0.89	+0.7
5,694,763	+		PFLU_RS25510	0.89	+0.7
5,694,763	+		PFLU_RS25510	0.89	+0.4
5,694,763	+		PFLU_RS25510	0.89	+1.0
5,694,763	+		PFLU_RS25510	0.89	+0.4
5,694,763	+		PFLU_RS25510	0.89	+0.4
5,694,764	-		PFLU_RS25510	0.89	+0.7
5,694,764	-		PFLU_RS25510	0.89	+0.1
5,694,764	-		PFLU_RS25510	0.89	-1.0
5,694,764	-		PFLU_RS25510	0.89	-0.2
5,694,764	-		PFLU_RS25510	0.89	+0.2
5,694,764	-		PFLU_RS25510	0.89	+0.6
5,694,835	+				-0.9
5,694,835	+				-0.5
5,694,835	+				+0.6
5,694,835	+				-0.5
5,694,835	+				+0.5
5,694,835	+				+0.1
5,694,836	-				+0.4
5,694,836	-				-0.8
5,694,836	-				+1.2
5,694,836	-				+1.2
5,694,861	+				+0.5
5,694,861	+				-1.2
5,694,862	-				+0.6
5,694,862	-				+0.5
5,694,862	-				+0.4
5,694,865	+				+0.3
5,694,865	+				+0.7
5,694,865	+				+0.2
5,694,865	+				-0.8
5,694,865	+				-0.1
5,694,865	+				+1.1
5,694,865	+				-1.3
5,694,866	-				-1.4
5,694,866	-				+1.1
5,694,866	-				+0.6
5,694,866	-				+0.3
5,694,866	-				-1.6
5,694,866	-				-0.5
5,694,866	-				+0.1
5,694,866	-				+0.0
5,695,064	-				+0.1
5,695,077	+				+0.2
5,695,077	+				-0.2
5,695,087	-				-0.8
5,695,087	-				+0.3
5,695,087	-				+0.8
5,695,106	+				+0.3
5,695,126	+				+0.0
5,695,126	+				+0.5
5,695,126	+				-0.2
5,695,142	+				+0.6
5,695,252	+		PFLU_RS25515	0.22	+0.7
5,695,252	+		PFLU_RS25515	0.22	-0.1
5,695,253	-		PFLU_RS25515	0.22	-1.7
5,695,253	-		PFLU_RS25515	0.22	-2.8
5,695,282	+		PFLU_RS25515	0.26	-0.9
5,695,282	+		PFLU_RS25515	0.26	-1.5
5,695,283	-		PFLU_RS25515	0.26	-1.4
5,695,283	-		PFLU_RS25515	0.26	-0.2
5,695,283	-		PFLU_RS25515	0.26	-0.2
5,695,283	-		PFLU_RS25515	0.26	-1.1
5,695,283	-		PFLU_RS25515	0.26	-0.4
5,695,283	-		PFLU_RS25515	0.26	-0.2
5,695,405	+		PFLU_RS25515	0.40	+0.7
5,695,406	-		PFLU_RS25515	0.40	+1.5
5,695,502	+		PFLU_RS25515	0.51	-0.6
5,695,502	+		PFLU_RS25515	0.51	+0.3
5,695,573	+		PFLU_RS25515	0.60	+0.6
5,695,573	+		PFLU_RS25515	0.60	-0.2
5,695,573	+		PFLU_RS25515	0.60	+0.1
5,695,573	+		PFLU_RS25515	0.60	-0.7
5,695,574	-		PFLU_RS25515	0.60	-0.5
5,695,574	-		PFLU_RS25515	0.60	+1.1
5,695,574	-		PFLU_RS25515	0.60	-0.6
5,695,683	+		PFLU_RS25515	0.72	-0.2
5,695,683	+		PFLU_RS25515	0.72	-0.4
5,695,684	-		PFLU_RS25515	0.72	+1.2
5,695,684	-		PFLU_RS25515	0.72	+1.4
5,695,684	-		PFLU_RS25515	0.72	-0.7
5,695,684	-		PFLU_RS25515	0.72	-0.1
5,695,826	-		PFLU_RS25515	0.89	-0.6
5,695,826	-		PFLU_RS25515	0.89	-0.2
5,695,834	+				-2.1
5,695,834	+				+1.2
5,695,834	+				+0.3
5,695,834	+				-1.0
5,695,835	-				-0.2