Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS23585

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
5,289,865	+		PFLU_RS23580	0.34	+1.7
5,289,865	+		PFLU_RS23580	0.34	-0.7
5,289,865	+		PFLU_RS23580	0.34	-1.2
5,289,865	+		PFLU_RS23580	0.34	-0.5
5,289,865	+		PFLU_RS23580	0.34	-0.7
5,289,865	+		PFLU_RS23580	0.34	+0.2
5,289,865	+		PFLU_RS23580	0.34	+0.2
5,289,865	+		PFLU_RS23580	0.34	+0.5
5,289,865	+		PFLU_RS23580	0.34	-0.2
5,289,865	+		PFLU_RS23580	0.34	+0.2
5,289,865	+		PFLU_RS23580	0.34	+1.2
5,289,866	-		PFLU_RS23580	0.34	-0.1
5,289,866	-		PFLU_RS23580	0.34	+0.8
5,289,866	-		PFLU_RS23580	0.34	+0.4
5,289,866	-		PFLU_RS23580	0.34	+0.4
5,289,866	-		PFLU_RS23580	0.34	+0.0
5,289,866	-		PFLU_RS23580	0.34	-0.3
5,289,866	-		PFLU_RS23580	0.34	-0.3
5,289,866	-		PFLU_RS23580	0.34	-0.4
5,289,866	-		PFLU_RS23580	0.34	+0.7
5,289,866	-		PFLU_RS23580	0.34	-0.7
5,289,866	-		PFLU_RS23580	0.34	-0.1
5,289,866	-		PFLU_RS23580	0.34	+1.3
5,290,063	+		PFLU_RS23580	0.50	-0.8
5,290,063	+		PFLU_RS23580	0.50	+0.6
5,290,064	-		PFLU_RS23580	0.50	-1.3
5,290,064	-		PFLU_RS23580	0.50	-1.5
5,290,064	-		PFLU_RS23580	0.50	-1.0
5,290,064	-		PFLU_RS23580	0.50	+0.9
5,290,094	-		PFLU_RS23580	0.53	+1.3
5,290,108	+		PFLU_RS23580	0.54	-1.3
5,290,109	-		PFLU_RS23580	0.54	-1.2
5,290,192	+		PFLU_RS23580	0.61	+1.5
5,290,192	+		PFLU_RS23580	0.61	-0.7
5,290,192	+		PFLU_RS23580	0.61	-0.6
5,290,192	+		PFLU_RS23580	0.61	+1.3
5,290,192	+		PFLU_RS23580	0.61	-0.7
5,290,192	+		PFLU_RS23580	0.61	+0.8
5,290,192	+		PFLU_RS23580	0.61	+0.4
5,290,192	+		PFLU_RS23580	0.61	-2.9
5,290,192	+		PFLU_RS23580	0.61	+0.0
5,290,193	-		PFLU_RS23580	0.61	-0.7
5,290,193	-		PFLU_RS23580	0.61	-0.6
5,290,193	-		PFLU_RS23580	0.61	+0.4
5,290,193	-		PFLU_RS23580	0.61	+0.0
5,290,193	-		PFLU_RS23580	0.61	+1.0
5,290,193	-		PFLU_RS23580	0.61	-0.2
5,290,193	-		PFLU_RS23580	0.61	-1.1
5,290,193	-		PFLU_RS23580	0.61	-0.7
5,290,270	+		PFLU_RS23580	0.67	+0.1
5,290,271	-		PFLU_RS23580	0.67	+0.7
5,290,271	-		PFLU_RS23580	0.67	-1.1
5,290,279	+		PFLU_RS23580	0.68	+0.9
5,290,279	+		PFLU_RS23580	0.68	+1.3
5,290,280	-		PFLU_RS23580	0.68	-0.3
5,290,441	+		PFLU_RS23580	0.81	-0.8
5,290,441	+		PFLU_RS23580	0.81	-0.2
5,290,441	+		PFLU_RS23580	0.81	-1.2
5,290,441	+		PFLU_RS23580	0.81	-1.1
5,290,441	+		PFLU_RS23580	0.81	+1.0
5,290,441	+		PFLU_RS23580	0.81	+0.1
5,290,441	+		PFLU_RS23580	0.81	-0.1
5,290,442	-		PFLU_RS23580	0.81	-0.2
5,290,442	-		PFLU_RS23580	0.81	+0.1
5,290,442	-		PFLU_RS23580	0.81	+0.0
5,290,442	-		PFLU_RS23580	0.81	-1.0
5,290,442	-		PFLU_RS23580	0.81	-1.3
5,290,442	-		PFLU_RS23580	0.81	-0.7
5,290,468	+		PFLU_RS23580	0.83	+0.0
5,290,468	+		PFLU_RS23580	0.83	+1.7
5,290,468	+		PFLU_RS23580	0.83	+0.0
5,290,468	+		PFLU_RS23580	0.83	-0.2
5,290,469	-		PFLU_RS23580	0.83	-1.4
5,290,469	-		PFLU_RS23580	0.83	-2.4
5,290,469	-		PFLU_RS23580	0.83	+0.3
5,290,529	+		PFLU_RS23580	0.88	-0.4
5,290,688	+				+1.1
5,290,688	+				+0.7
5,290,689	-				+0.8
5,290,689	-				+0.8
5,290,689	-				+0.0
5,290,689	-				+0.4
5,290,689	-				-0.6
5,290,689	-				-0.5
5,290,689	-				-0.5
5,290,689	-				-0.6
5,290,689	-				+1.4
5,290,827	+				+1.3
5,290,827	+				+0.2
5,290,827	+				+0.1
5,290,827	+				-0.6
5,290,827	+				+0.0
5,290,827	+				+1.7
5,290,827	+				+0.7
5,290,827	+				+2.9
5,290,827	+				+1.3
5,290,828	-				-0.4
5,290,933	-				-0.4
5,290,933	-				-0.3
5,290,933	-				+1.8
5,291,322	+		PFLU_RS23585	0.37	-2.3
5,291,322	+		PFLU_RS23585	0.37	+0.3
5,291,323	-		PFLU_RS23585	0.37	+1.2
5,291,323	-		PFLU_RS23585	0.37	-0.2
5,291,323	-		PFLU_RS23585	0.37	+1.1
5,291,323	-		PFLU_RS23585	0.37	+0.6
5,291,323	-		PFLU_RS23585	0.37	-0.2
5,291,556	+		PFLU_RS23585	0.54	+1.2
5,291,556	+		PFLU_RS23585	0.54	+2.1
5,291,556	+		PFLU_RS23585	0.54	+1.0
5,291,556	+		PFLU_RS23585	0.54	+1.5
5,291,556	+		PFLU_RS23585	0.54	+1.1
5,291,556	+		PFLU_RS23585	0.54	+0.8
5,291,556	+		PFLU_RS23585	0.54	-0.1
5,291,557	-		PFLU_RS23585	0.54	-1.7
5,291,557	-		PFLU_RS23585	0.54	+0.4
5,291,557	-		PFLU_RS23585	0.54	+0.6
5,291,557	-		PFLU_RS23585	0.54	+1.6
5,291,557	-		PFLU_RS23585	0.54	+0.6
5,291,557	-		PFLU_RS23585	0.54	+1.1
5,291,557	-		PFLU_RS23585	0.54	+0.4
5,291,557	-		PFLU_RS23585	0.54	-0.9
5,291,557	-		PFLU_RS23585	0.54	+0.6
5,291,557	-		PFLU_RS23585	0.54	+0.8
5,291,557	-		PFLU_RS23585	0.54	+2.1
5,291,625	+		PFLU_RS23585	0.59	+0.5
5,292,079	+				+1.9
5,292,079	+				+1.1
5,292,143	+				+1.6
5,292,143	+				+0.6
5,292,143	+				+1.0
5,292,144	-				+0.4
5,292,144	-				+1.2
5,292,144	-				+1.4
5,292,144	-				-0.4
5,292,144	-				-2.3
5,292,144	-				+0.5
5,292,144	-				-0.6
5,292,144	-				+2.1
5,292,144	-				+0.3
5,292,144	-				+0.1
5,292,153	+				-0.7
5,292,153	+				+0.4
5,292,205	+				-0.2
5,292,205	+				+0.8
5,292,205	+				+0.4
5,292,205	+				-0.3
5,292,205	+				-0.2
5,292,206	-				-0.0
5,292,206	-				+1.5
5,292,206	-				+1.1
5,292,206	-				+0.8
5,292,208	+				-0.7
5,292,209	-				+1.3
5,292,209	-				+1.7
5,292,209	-				+1.5
5,292,244	+				+0.5
5,292,245	-				-0.2
5,292,554	+		PFLU_RS23590	0.54	+1.2
5,292,555	-		PFLU_RS23590	0.55	-0.6
5,292,555	-		PFLU_RS23590	0.55	+1.2
5,292,555	-		PFLU_RS23590	0.55	+2.2
5,292,555	-		PFLU_RS23590	0.55	+0.3
5,292,818	-				-0.8
5,292,824	-				-0.9
5,292,838	+				+1.2
5,292,838	+				+0.3
5,292,839	-				-0.2
5,292,839	-				+0.7
5,292,845	-				+1.5
5,292,886	+				+0.8
5,292,886	+				+1.5
5,293,021	+				+1.0
5,293,021	+				+1.1
5,293,022	-				-1.4
5,293,022	-				+1.0
5,293,022	-				-2.2