Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS22155

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,983,500	+		PFLU_RS22150	0.12	-0.9
4,983,500	+		PFLU_RS22150	0.12	+0.6
4,983,500	+		PFLU_RS22150	0.12	-0.9
4,983,501	-		PFLU_RS22150	0.12	+0.2
4,983,509	+		PFLU_RS22150	0.13	+0.6
4,983,509	+		PFLU_RS22150	0.13	-0.3
4,983,509	+		PFLU_RS22150	0.13	-1.4
4,983,510	-		PFLU_RS22150	0.13	+0.1
4,983,510	-		PFLU_RS22150	0.13	-0.1
4,983,510	-		PFLU_RS22150	0.13	+1.0
4,983,572	+		PFLU_RS22150	0.18	-0.5
4,983,573	-		PFLU_RS22150	0.18	-1.3
4,983,573	-		PFLU_RS22150	0.18	-0.2
4,983,573	-		PFLU_RS22150	0.18	+0.8
4,983,614	+		PFLU_RS22150	0.22	+0.4
4,983,848	+		PFLU_RS22150	0.41	-0.4
4,983,848	+		PFLU_RS22150	0.41	+0.5
4,983,848	+		PFLU_RS22150	0.41	+0.3
4,983,849	-		PFLU_RS22150	0.41	-0.0
4,983,849	-		PFLU_RS22150	0.41	+0.2
4,983,849	-		PFLU_RS22150	0.41	+1.1
4,983,849	-		PFLU_RS22150	0.41	+0.1
4,983,935	-		PFLU_RS22150	0.48	-0.4
4,983,980	+		PFLU_RS22150	0.52	+0.7
4,983,980	+		PFLU_RS22150	0.52	+0.3
4,983,980	+		PFLU_RS22150	0.52	-0.5
4,983,980	+		PFLU_RS22150	0.52	+0.7
4,983,980	+		PFLU_RS22150	0.52	+0.2
4,983,980	+		PFLU_RS22150	0.52	+0.7
4,983,980	+		PFLU_RS22150	0.52	-0.7
4,983,980	+		PFLU_RS22150	0.52	-1.3
4,983,980	+		PFLU_RS22150	0.52	+0.9
4,983,980	+		PFLU_RS22150	0.52	-0.1
4,983,980	+		PFLU_RS22150	0.52	+0.8
4,983,980	+		PFLU_RS22150	0.52	+0.1
4,983,980	+		PFLU_RS22150	0.52	-0.7
4,983,980	+		PFLU_RS22150	0.52	+1.2
4,983,980	+		PFLU_RS22150	0.52	-0.7
4,983,980	+		PFLU_RS22150	0.52	-0.6
4,983,980	+		PFLU_RS22150	0.52	-0.4
4,983,980	+		PFLU_RS22150	0.52	-1.0
4,983,980	+		PFLU_RS22150	0.52	+0.4
4,983,980	+		PFLU_RS22150	0.52	-0.1
4,983,980	+		PFLU_RS22150	0.52	-0.1
4,983,981	-		PFLU_RS22150	0.52	+0.8
4,983,981	-		PFLU_RS22150	0.52	-1.4
4,983,981	-		PFLU_RS22150	0.52	-0.8
4,983,981	-		PFLU_RS22150	0.52	-1.3
4,983,981	-		PFLU_RS22150	0.52	+1.3
4,983,981	-		PFLU_RS22150	0.52	-0.1
4,983,981	-		PFLU_RS22150	0.52	+0.4
4,983,981	-		PFLU_RS22150	0.52	+0.5
4,983,981	-		PFLU_RS22150	0.52	+0.1
4,983,981	-		PFLU_RS22150	0.52	-0.1
4,983,981	-		PFLU_RS22150	0.52	-0.1
4,983,981	-		PFLU_RS22150	0.52	-0.9
4,983,981	-		PFLU_RS22150	0.52	+0.4
4,983,981	-		PFLU_RS22150	0.52	-1.0
4,983,981	-		PFLU_RS22150	0.52	-0.0
4,983,981	-		PFLU_RS22150	0.52	-1.5
4,983,981	-		PFLU_RS22150	0.52	-1.0
4,983,981	-		PFLU_RS22150	0.52	-1.2
4,983,981	-		PFLU_RS22150	0.52	+0.5
4,983,981	-		PFLU_RS22150	0.52	+1.4
4,983,981	-		PFLU_RS22150	0.52	-0.2
4,983,981	-		PFLU_RS22150	0.52	+0.3
4,984,001	+		PFLU_RS22150	0.54	-0.2
4,984,001	+		PFLU_RS22150	0.54	-0.3
4,984,001	+		PFLU_RS22150	0.54	+0.6
4,984,001	+		PFLU_RS22150	0.54	-0.6
4,984,001	+		PFLU_RS22150	0.54	-1.5
4,984,001	+		PFLU_RS22150	0.54	-0.2
4,984,001	+		PFLU_RS22150	0.54	+0.5
4,984,002	-		PFLU_RS22150	0.54	-0.6
4,984,002	-		PFLU_RS22150	0.54	-0.1
4,984,002	-		PFLU_RS22150	0.54	+0.6
4,984,002	-		PFLU_RS22150	0.54	-0.9
4,984,002	-		PFLU_RS22150	0.54	-1.0
4,984,002	-		PFLU_RS22150	0.54	-0.7
4,984,002	-		PFLU_RS22150	0.54	+1.0
4,984,002	-		PFLU_RS22150	0.54	-0.6
4,984,002	-		PFLU_RS22150	0.54	-0.4
4,984,002	-		PFLU_RS22150	0.54	+0.9
4,984,173	+		PFLU_RS22150	0.68	-2.8
4,984,174	-		PFLU_RS22150	0.68	-0.7
4,984,428	+		PFLU_RS22150	0.89	-2.6
4,984,672	+		PFLU_RS22155	0.14	-1.5
4,984,672	+		PFLU_RS22155	0.14	-0.0
4,984,673	-		PFLU_RS22155	0.14	-0.4
4,984,673	-		PFLU_RS22155	0.14	+1.4
4,984,673	-		PFLU_RS22155	0.14	-1.4
4,984,673	-		PFLU_RS22155	0.14	+1.3
4,984,675	+		PFLU_RS22155	0.14	+0.8
4,984,676	-		PFLU_RS22155	0.14	-2.5
4,984,738	+		PFLU_RS22155	0.19	-0.2
4,984,738	+		PFLU_RS22155	0.19	-0.0
4,984,738	+		PFLU_RS22155	0.19	+1.0
4,984,739	-		PFLU_RS22155	0.19	+0.7
4,984,801	+		PFLU_RS22155	0.23	+0.1
4,984,801	+		PFLU_RS22155	0.23	-0.9
4,984,801	+		PFLU_RS22155	0.23	+1.4
4,984,801	+		PFLU_RS22155	0.23	+0.4
4,984,801	+		PFLU_RS22155	0.23	+0.6
4,984,801	+		PFLU_RS22155	0.23	+0.5
4,984,801	+		PFLU_RS22155	0.23	-1.8
4,984,801	+		PFLU_RS22155	0.23	+0.3
4,984,801	+		PFLU_RS22155	0.23	-0.2
4,984,802	-		PFLU_RS22155	0.23	-1.9
4,984,802	-		PFLU_RS22155	0.23	+0.2
4,984,820	+		PFLU_RS22155	0.24	+0.3
4,984,841	+		PFLU_RS22155	0.26	-0.0
4,984,841	+		PFLU_RS22155	0.26	-0.1
4,984,841	+		PFLU_RS22155	0.26	-0.1
4,984,841	+		PFLU_RS22155	0.26	-0.1
4,984,841	+		PFLU_RS22155	0.26	-0.4
4,984,842	-		PFLU_RS22155	0.26	+0.9
4,984,842	-		PFLU_RS22155	0.26	+0.7
4,984,842	-		PFLU_RS22155	0.26	-3.1
4,984,842	-		PFLU_RS22155	0.26	+0.3
4,984,842	-		PFLU_RS22155	0.26	+0.4
4,984,842	-		PFLU_RS22155	0.26	+0.5
4,984,842	-		PFLU_RS22155	0.26	+0.4
4,984,949	+		PFLU_RS22155	0.33	+1.2
4,985,145	+		PFLU_RS22155	0.47	+0.6
4,985,146	-		PFLU_RS22155	0.47	-0.6
4,985,146	-		PFLU_RS22155	0.47	-0.1
4,985,146	-		PFLU_RS22155	0.47	+0.4
4,985,157	-		PFLU_RS22155	0.48	-0.5
4,985,168	-		PFLU_RS22155	0.48	-1.3
4,985,209	+		PFLU_RS22155	0.51	+0.1
4,985,209	+		PFLU_RS22155	0.51	+0.1
4,985,209	+		PFLU_RS22155	0.51	-0.5
4,985,209	+		PFLU_RS22155	0.51	+0.2
4,985,209	+		PFLU_RS22155	0.51	+0.2
4,985,210	-		PFLU_RS22155	0.51	+0.3
4,985,210	-		PFLU_RS22155	0.51	+0.0
4,985,210	-		PFLU_RS22155	0.51	+0.7
4,985,285	+		PFLU_RS22155	0.56	-0.4
4,985,285	+		PFLU_RS22155	0.56	-1.1
4,985,286	-		PFLU_RS22155	0.57	+0.0
4,985,286	-		PFLU_RS22155	0.57	-0.8
4,985,286	-		PFLU_RS22155	0.57	+0.9
4,985,350	+		PFLU_RS22155	0.61	+0.5
4,985,350	+		PFLU_RS22155	0.61	-1.4
4,985,350	+		PFLU_RS22155	0.61	-0.2
4,985,350	+		PFLU_RS22155	0.61	+0.2
4,985,351	-		PFLU_RS22155	0.61	+0.1
4,985,351	-		PFLU_RS22155	0.61	+1.0
4,985,351	-		PFLU_RS22155	0.61	-1.1
4,985,351	-		PFLU_RS22155	0.61	-1.5
4,985,351	-		PFLU_RS22155	0.61	+0.0
4,985,351	-		PFLU_RS22155	0.61	-0.8
4,985,351	-		PFLU_RS22155	0.61	+0.5
4,985,351	-		PFLU_RS22155	0.61	+0.3
4,985,351	-		PFLU_RS22155	0.61	+2.1
4,985,351	-		PFLU_RS22155	0.61	-1.0
4,985,458	+		PFLU_RS22155	0.68	-0.3
4,985,459	-		PFLU_RS22155	0.69	+0.0
4,985,459	-		PFLU_RS22155	0.69	+0.3
4,985,488	+		PFLU_RS22155	0.71	+0.3
4,985,488	+		PFLU_RS22155	0.71	+0.0
4,985,488	+		PFLU_RS22155	0.71	-1.4
4,985,488	+		PFLU_RS22155	0.71	-0.8
4,985,548	+		PFLU_RS22155	0.75	+0.3
4,985,548	+		PFLU_RS22155	0.75	-0.3
4,985,548	+		PFLU_RS22155	0.75	+0.9
4,985,548	+		PFLU_RS22155	0.75	+0.5
4,985,548	+		PFLU_RS22155	0.75	-0.1
4,985,548	+		PFLU_RS22155	0.75	+0.1
4,985,548	+		PFLU_RS22155	0.75	+0.2
4,985,548	+		PFLU_RS22155	0.75	-0.8
4,985,549	-		PFLU_RS22155	0.75	-0.1
4,985,549	-		PFLU_RS22155	0.75	+0.0
4,985,549	-		PFLU_RS22155	0.75	-0.3
4,985,549	-		PFLU_RS22155	0.75	+0.7
4,985,549	-		PFLU_RS22155	0.75	-0.4
4,985,549	-		PFLU_RS22155	0.75	+0.1
4,985,549	-		PFLU_RS22155	0.75	-0.0
4,985,549	-		PFLU_RS22155	0.75	+1.0
4,985,549	-		PFLU_RS22155	0.75	+0.7
4,985,563	+		PFLU_RS22155	0.76	-0.6
4,985,603	+		PFLU_RS22155	0.79	+0.3
4,985,603	+		PFLU_RS22155	0.79	-0.8
4,985,604	-		PFLU_RS22155	0.79	+0.6
4,985,682	+		PFLU_RS22155	0.84	+1.0
4,985,683	-		PFLU_RS22155	0.84	+0.3
4,985,683	-		PFLU_RS22155	0.84	+0.9
4,985,683	-		PFLU_RS22155	0.84	+0.7
4,985,683	-		PFLU_RS22155	0.84	-1.2
4,985,683	-		PFLU_RS22155	0.84	-0.0
4,985,683	-		PFLU_RS22155	0.84	-2.0
4,985,687	+		PFLU_RS22155	0.84	+1.1
4,985,687	+		PFLU_RS22155	0.84	+0.8
4,985,688	-		PFLU_RS22155	0.84	+0.7
4,985,688	-		PFLU_RS22155	0.84	+0.2
4,985,782	+				+0.4
4,985,782	+				-0.3
4,985,782	+				+0.2
4,985,782	+				-0.3
4,985,783	-				+0.4
4,985,783	-				-1.5
4,985,783	-				+0.2
4,985,783	-				-1.0
4,985,783	-				+0.5
4,985,783	-				+0.9
4,985,830	+				-0.7
4,985,830	+				-0.2
4,985,831	-				-1.6
4,985,831	-				+1.6
4,985,831	-				+0.5
4,985,831	-				-1.3
4,985,831	-				+0.0
4,985,831	-				+1.0
4,985,831	-				-0.1
4,985,831	-				-0.5
4,985,872	+				+0.9
4,985,872	+				-2.3
4,985,872	+				+0.4
4,985,872	+				+0.5
4,985,872	+				+0.9
4,985,873	-				+0.8
4,985,873	-				+0.1
4,985,873	-				-0.3
4,985,873	-				-0.3
4,985,873	-				-0.1
4,985,873	-				-1.0
4,985,873	-				+0.3
4,985,887	+				+1.2
4,985,887	+				+1.1
4,985,888	-				+0.6
4,985,888	-				+0.8
4,985,888	-				-1.0
4,985,930	+				+0.7
4,985,930	+				-1.4
4,985,930	+				-0.8
4,985,931	-				-0.3
4,986,053	+				-1.6
4,986,053	+				-2.6
4,986,053	+				-0.3
4,986,054	-				-0.3
4,986,061	+				-0.1
4,986,061	+				-0.3
4,986,061	+				+1.0
4,986,062	-				+1.6
4,986,062	-				-0.4
4,986,062	-				+0.9
4,986,062	-				+0.2
4,986,197	+		PFLU_RS22160	0.22	-0.3
4,986,232	+		PFLU_RS22160	0.31	+0.8
4,986,232	+		PFLU_RS22160	0.31	-1.9
4,986,233	-		PFLU_RS22160	0.31	-0.5
4,986,233	-		PFLU_RS22160	0.31	+0.5
4,986,243	+		PFLU_RS22160	0.33	-0.2
4,986,243	+		PFLU_RS22160	0.33	+1.0
4,986,244	-		PFLU_RS22160	0.34	+0.1
4,986,244	-		PFLU_RS22160	0.34	+0.4
4,986,244	-		PFLU_RS22160	0.34	+0.6
4,986,244	-		PFLU_RS22160	0.34	+0.9
4,986,244	-		PFLU_RS22160	0.34	-0.3
4,986,244	-		PFLU_RS22160	0.34	-0.3
4,986,244	-		PFLU_RS22160	0.34	+0.1
4,986,324	-		PFLU_RS22160	0.54	+1.4
4,986,342	+		PFLU_RS22160	0.58	+0.7
4,986,342	+		PFLU_RS22160	0.58	+0.2
4,986,342	+		PFLU_RS22160	0.58	+0.6
4,986,342	+		PFLU_RS22160	0.58	+0.8
4,986,342	+		PFLU_RS22160	0.58	+0.8
4,986,342	+		PFLU_RS22160	0.58	-1.5
4,986,342	+		PFLU_RS22160	0.58	+0.8
4,986,342	+		PFLU_RS22160	0.58	-0.5
4,986,342	+		PFLU_RS22160	0.58	+0.2
4,986,342	+		PFLU_RS22160	0.58	+1.1
4,986,342	+		PFLU_RS22160	0.58	-1.1
4,986,343	-		PFLU_RS22160	0.58	+1.4
4,986,343	-		PFLU_RS22160	0.58	-0.8
4,986,343	-		PFLU_RS22160	0.58	+0.2
4,986,343	-		PFLU_RS22160	0.58	-0.0
4,986,343	-		PFLU_RS22160	0.58	-1.0
4,986,343	-		PFLU_RS22160	0.58	-0.6
4,986,343	-		PFLU_RS22160	0.58	-0.7
4,986,343	-		PFLU_RS22160	0.58	+1.2
4,986,343	-		PFLU_RS22160	0.58	+0.5
4,986,343	-		PFLU_RS22160	0.58	+0.4
4,986,343	-		PFLU_RS22160	0.58	+1.1
4,986,343	-		PFLU_RS22160	0.58	-1.1
4,986,343	-		PFLU_RS22160	0.58	-1.7
4,986,343	-		PFLU_RS22160	0.58	-0.1
4,986,343	-		PFLU_RS22160	0.58	-1.4
4,986,343	-		PFLU_RS22160	0.58	-0.4
4,986,351	+		PFLU_RS22160	0.60	+0.5
4,986,351	+		PFLU_RS22160	0.60	-0.3
4,986,351	+		PFLU_RS22160	0.60	+0.3
4,986,351	+		PFLU_RS22160	0.60	+1.4
4,986,351	+		PFLU_RS22160	0.60	-2.1
4,986,351	+		PFLU_RS22160	0.60	-0.9
4,986,352	-		PFLU_RS22160	0.61	-1.7
4,986,352	-		PFLU_RS22160	0.61	+0.4
4,986,352	-		PFLU_RS22160	0.61	+1.2
4,986,352	-		PFLU_RS22160	0.61	-0.8
4,986,352	-		PFLU_RS22160	0.61	+1.3
4,986,352	-		PFLU_RS22160	0.61	-0.7
4,986,414	+		PFLU_RS22160	0.76	-0.6
4,986,414	+		PFLU_RS22160	0.76	-0.8
4,986,414	+		PFLU_RS22160	0.76	+0.3
4,986,414	+		PFLU_RS22160	0.76	+0.4
4,986,415	-		PFLU_RS22160	0.76	-1.1
4,986,415	-		PFLU_RS22160	0.76	-0.1
4,986,415	-		PFLU_RS22160	0.76	-0.3
4,986,415	-		PFLU_RS22160	0.76	+0.5
4,986,415	-		PFLU_RS22160	0.76	+0.6
4,986,415	-		PFLU_RS22160	0.76	+0.2
4,986,415	-		PFLU_RS22160	0.76	-0.4
4,986,415	-		PFLU_RS22160	0.76	+1.8
4,986,415	-		PFLU_RS22160	0.76	-0.5
4,986,415	-		PFLU_RS22160	0.76	-0.1
4,986,483	+				-0.3
4,986,523	-				-0.3
4,986,523	-				-1.0
4,986,540	+				+0.7
4,986,541	-				-0.2
4,986,558	-				-0.3
4,986,566	+				+0.4
4,986,566	+				+1.4
4,986,566	+				-1.0
4,986,566	+				-0.1
4,986,566	+				-0.2
4,986,566	+				+1.1
4,986,566	+				+1.3
4,986,567	-				-1.1
4,986,567	-				-0.9
4,986,607	+				+0.2
4,986,607	+				+0.8
4,986,607	+				-2.3
4,986,607	+				+1.2
4,986,607	+				-0.0
4,986,607	+				-0.0
4,986,607	+				-0.5
4,986,607	+				+0.7
4,986,608	-				+0.4
4,986,609	+				-0.6
4,986,609	+				+0.7
4,986,609	+				+0.3
4,986,609	+				+0.6
4,986,609	+				-0.3
4,986,609	+				+0.6
4,986,609	+				-0.6
4,986,609	+				+2.4
4,986,610	-				+0.4
4,986,610	-				+0.9
4,986,610	-				+1.4
4,986,610	-				+0.4
4,986,610	-				-0.6
4,986,638	-				-0.1
4,986,791	-		PFLU_RS22165	0.28	+0.2
4,986,791	-		PFLU_RS22165	0.28	-2.6