Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21910

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,930,136	+		PFLU_RS21895	0.83	+0.4
4,930,137	-		PFLU_RS21895	0.84	-1.5
4,930,285	+				+2.4
4,930,285	+				-0.6
4,930,285	+				-0.8
4,930,285	+				-1.3
4,930,286	-				+0.1
4,930,286	-				-0.2
4,930,286	-				+0.3
4,930,286	-				+0.2
4,930,286	-				-1.2
4,930,293	-				+1.2
4,930,293	-				-0.4
4,930,293	-				-1.0
4,930,293	-				-0.8
4,930,411	+				-0.4
4,930,412	-				-0.1
4,930,412	-				+1.4
4,930,447	-		PFLU_RS21900	0.11	-0.5
4,930,510	+		PFLU_RS21900	0.34	-0.4
4,930,510	+		PFLU_RS21900	0.34	-0.4
4,930,511	-		PFLU_RS21900	0.34	+0.6
4,930,511	-		PFLU_RS21900	0.34	+1.4
4,930,511	-		PFLU_RS21900	0.34	-0.7
4,930,694	+				-0.3
4,930,694	+				-0.7
4,930,695	-				-1.1
4,930,695	-				+0.7
4,930,745	+				+0.2
4,930,745	+				-1.4
4,930,838	+		PFLU_RS21905	0.35	-0.8
4,930,839	-		PFLU_RS21905	0.35	+0.8
4,930,990	+		PFLU_RS21905	0.88	-0.1
4,930,990	+		PFLU_RS21905	0.88	-0.2
4,930,990	+		PFLU_RS21905	0.88	-0.6
4,930,990	+		PFLU_RS21905	0.88	-0.9
4,930,990	+		PFLU_RS21905	0.88	-0.7
4,930,990	+		PFLU_RS21905	0.88	-1.0
4,930,990	+		PFLU_RS21905	0.88	-0.2
4,930,990	+		PFLU_RS21905	0.88	+0.9
4,930,990	+		PFLU_RS21905	0.88	+0.1
4,930,990	+		PFLU_RS21905	0.88	+0.7
4,930,990	+		PFLU_RS21905	0.88	+0.5
4,930,990	+		PFLU_RS21905	0.88	+0.4
4,930,991	-		PFLU_RS21905	0.88	-1.8
4,930,991	-		PFLU_RS21905	0.88	-0.2
4,930,991	-		PFLU_RS21905	0.88	+0.7
4,930,991	-		PFLU_RS21905	0.88	-0.6
4,930,991	-		PFLU_RS21905	0.88	+0.4
4,930,991	-		PFLU_RS21905	0.88	+1.1
4,931,024	+				-0.9
4,931,024	+				+0.7
4,931,024	+				+1.1
4,931,025	-				+0.2
4,931,025	-				-0.4
4,931,025	-				+2.1
4,931,025	-				-0.0
4,931,025	-				+0.6
4,931,070	+				-0.6
4,931,070	+				+0.9
4,931,070	+				+0.6
4,931,070	+				-3.3
4,931,071	-				+0.4
4,931,071	-				-1.9
4,931,071	-				+1.2
4,931,071	-				+0.2
4,931,071	-				+0.5
4,931,071	-				-2.0
4,931,071	-				-2.5
4,931,072	+				-0.8
4,931,072	+				-1.0
4,931,072	+				+0.7
4,931,072	+				+1.0
4,931,072	+				+0.9
4,931,072	+				+0.8
4,931,072	+				+0.3
4,931,072	+				+2.0
4,931,073	-				+0.6
4,931,073	-				-0.2
4,931,073	-				+1.4
4,931,073	-				-0.3
4,931,073	-				-0.6
4,931,073	-				+1.4
4,931,073	-				+1.0
4,931,073	-				+0.9
4,931,076	-				+1.0
4,931,143	+				-0.7
4,931,143	+				+0.4
4,931,144	-				+1.1
4,931,144	-				+1.2
4,931,144	-				+0.9
4,931,319	+				+0.9
4,931,319	+				+2.1
4,931,319	+				+1.0
4,931,320	-				+1.2
4,931,413	+		PFLU_RS21910	0.14	+2.0
4,931,413	+		PFLU_RS21910	0.14	+0.6
4,931,413	+		PFLU_RS21910	0.14	+0.3
4,931,413	+		PFLU_RS21910	0.14	+0.0
4,931,414	-		PFLU_RS21910	0.14	+0.5
4,931,414	-		PFLU_RS21910	0.14	-0.3
4,931,414	-		PFLU_RS21910	0.14	-1.1
4,932,168	+		PFLU_RS21910	0.48	+0.9
4,932,168	+		PFLU_RS21910	0.48	+0.3
4,932,169	-		PFLU_RS21910	0.48	+1.0
4,932,171	+		PFLU_RS21910	0.48	+0.8
4,932,171	+		PFLU_RS21910	0.48	+1.0
4,932,171	+		PFLU_RS21910	0.48	-2.2
4,932,171	+		PFLU_RS21910	0.48	+0.8
4,932,171	+		PFLU_RS21910	0.48	+0.7
4,932,171	+		PFLU_RS21910	0.48	-0.2
4,932,171	+		PFLU_RS21910	0.48	+0.3
4,932,171	+		PFLU_RS21910	0.48	-0.2
4,932,172	-		PFLU_RS21910	0.49	+0.6
4,932,172	-		PFLU_RS21910	0.49	+0.3
4,932,172	-		PFLU_RS21910	0.49	+1.6
4,932,172	-		PFLU_RS21910	0.49	+0.9
4,932,172	-		PFLU_RS21910	0.49	+1.6
4,932,172	-		PFLU_RS21910	0.49	+0.9
4,932,172	-		PFLU_RS21910	0.49	+0.0
4,932,237	+		PFLU_RS21910	0.52	+1.1
4,932,237	+		PFLU_RS21910	0.52	+0.8
4,932,237	+		PFLU_RS21910	0.52	+1.8
4,932,238	-		PFLU_RS21910	0.52	+0.9
4,932,238	-		PFLU_RS21910	0.52	-0.7
4,932,238	-		PFLU_RS21910	0.52	+0.1
4,932,249	+		PFLU_RS21910	0.52	+0.7
4,932,249	+		PFLU_RS21910	0.52	-0.2
4,932,250	-		PFLU_RS21910	0.52	+0.8
4,932,339	+		PFLU_RS21910	0.56	+0.2
4,932,340	-		PFLU_RS21910	0.56	+0.2
4,932,483	+		PFLU_RS21910	0.63	+1.0
4,932,483	+		PFLU_RS21910	0.63	+1.0
4,932,483	+		PFLU_RS21910	0.63	-0.0
4,932,483	+		PFLU_RS21910	0.63	+0.6
4,932,484	-		PFLU_RS21910	0.63	-1.9
4,932,484	-		PFLU_RS21910	0.63	+1.3
4,932,484	-		PFLU_RS21910	0.63	+1.3
4,932,484	-		PFLU_RS21910	0.63	+0.4
4,932,484	-		PFLU_RS21910	0.63	-0.3
4,932,484	-		PFLU_RS21910	0.63	+0.7
4,932,495	+		PFLU_RS21910	0.63	+1.2
4,932,496	-		PFLU_RS21910	0.63	+0.7
4,932,523	-		PFLU_RS21910	0.65	+0.3
4,932,523	-		PFLU_RS21910	0.65	+1.0
4,932,537	+		PFLU_RS21910	0.65	+0.8
4,932,537	+		PFLU_RS21910	0.65	+0.1
4,932,537	+		PFLU_RS21910	0.65	-1.0
4,932,537	+		PFLU_RS21910	0.65	+1.3
4,932,537	+		PFLU_RS21910	0.65	+1.2
4,932,537	+		PFLU_RS21910	0.65	+0.7
4,932,537	+		PFLU_RS21910	0.65	+0.6
4,932,537	+		PFLU_RS21910	0.65	-0.1
4,932,537	+		PFLU_RS21910	0.65	-1.2
4,932,537	+		PFLU_RS21910	0.65	+1.1
4,932,537	+		PFLU_RS21910	0.65	+2.0
4,932,537	+		PFLU_RS21910	0.65	+0.0
4,932,537	+		PFLU_RS21910	0.65	+0.1
4,932,537	+		PFLU_RS21910	0.65	-0.1
4,932,537	+		PFLU_RS21910	0.65	+1.1
4,932,538	-		PFLU_RS21910	0.65	+0.7
4,932,538	-		PFLU_RS21910	0.65	+1.2
4,932,538	-		PFLU_RS21910	0.65	+0.9
4,932,538	-		PFLU_RS21910	0.65	-1.5
4,932,538	-		PFLU_RS21910	0.65	+1.4
4,932,538	-		PFLU_RS21910	0.65	+0.6
4,932,538	-		PFLU_RS21910	0.65	-0.5
4,932,538	-		PFLU_RS21910	0.65	+0.8
4,932,538	-		PFLU_RS21910	0.65	+0.5
4,932,538	-		PFLU_RS21910	0.65	+1.4
4,932,538	-		PFLU_RS21910	0.65	+2.0
4,932,538	-		PFLU_RS21910	0.65	+0.8
4,932,539	+		PFLU_RS21910	0.65	+1.2
4,932,539	+		PFLU_RS21910	0.65	+0.5
4,932,539	+		PFLU_RS21910	0.65	-1.9
4,932,539	+		PFLU_RS21910	0.65	-0.3
4,932,539	+		PFLU_RS21910	0.65	+1.2
4,932,539	+		PFLU_RS21910	0.65	+1.1
4,932,539	+		PFLU_RS21910	0.65	+1.3
4,932,539	+		PFLU_RS21910	0.65	+1.4
4,932,539	+		PFLU_RS21910	0.65	+0.8
4,932,539	+		PFLU_RS21910	0.65	+0.1
4,932,539	+		PFLU_RS21910	0.65	+0.9
4,932,540	-		PFLU_RS21910	0.65	+0.6
4,932,540	-		PFLU_RS21910	0.65	+0.4
4,932,540	-		PFLU_RS21910	0.65	+1.4
4,932,540	-		PFLU_RS21910	0.65	+0.6
4,932,540	-		PFLU_RS21910	0.65	+0.3
4,932,540	-		PFLU_RS21910	0.65	-1.4
4,932,540	-		PFLU_RS21910	0.65	+0.8
4,932,540	-		PFLU_RS21910	0.65	+0.6
4,932,540	-		PFLU_RS21910	0.65	-0.3
4,932,540	-		PFLU_RS21910	0.65	+0.6
4,932,540	-		PFLU_RS21910	0.65	+1.6
4,932,540	-		PFLU_RS21910	0.65	+0.4
4,932,540	-		PFLU_RS21910	0.65	+0.8
4,932,700	+		PFLU_RS21910	0.73	+1.1
4,932,700	+		PFLU_RS21910	0.73	+0.2
4,932,700	+		PFLU_RS21910	0.73	+2.3
4,932,700	+		PFLU_RS21910	0.73	+0.9
4,932,700	+		PFLU_RS21910	0.73	+0.8
4,932,701	-		PFLU_RS21910	0.73	+1.1
4,932,701	-		PFLU_RS21910	0.73	+0.8
4,932,701	-		PFLU_RS21910	0.73	+0.8
4,932,701	-		PFLU_RS21910	0.73	+2.4
4,932,701	-		PFLU_RS21910	0.73	+1.6
4,932,701	-		PFLU_RS21910	0.73	+1.4
4,932,701	-		PFLU_RS21910	0.73	+1.4
4,932,701	-		PFLU_RS21910	0.73	+0.1
4,932,701	-		PFLU_RS21910	0.73	+0.7
4,932,701	-		PFLU_RS21910	0.73	+0.8
4,932,701	-		PFLU_RS21910	0.73	+1.0
4,932,701	-		PFLU_RS21910	0.73	+0.6
4,932,701	-		PFLU_RS21910	0.73	+3.0
4,932,701	-		PFLU_RS21910	0.73	+1.2
4,932,750	+		PFLU_RS21910	0.75	+1.3
4,932,750	+		PFLU_RS21910	0.75	+0.6
4,932,750	+		PFLU_RS21910	0.75	+0.1
4,932,750	+		PFLU_RS21910	0.75	+1.4
4,932,750	+		PFLU_RS21910	0.75	-1.9
4,932,750	+		PFLU_RS21910	0.75	+1.2
4,932,750	+		PFLU_RS21910	0.75	+0.8
4,932,750	+		PFLU_RS21910	0.75	+2.7
4,932,750	+		PFLU_RS21910	0.75	+2.1
4,932,750	+		PFLU_RS21910	0.75	-0.3
4,932,751	-		PFLU_RS21910	0.75	+0.4
4,932,751	-		PFLU_RS21910	0.75	+1.0
4,932,751	-		PFLU_RS21910	0.75	-1.0
4,932,751	-		PFLU_RS21910	0.75	+2.0
4,932,751	-		PFLU_RS21910	0.75	+0.6
4,932,762	+		PFLU_RS21910	0.75	+1.1
4,932,762	+		PFLU_RS21910	0.75	+0.4
4,932,762	+		PFLU_RS21910	0.75	+0.0
4,932,789	+		PFLU_RS21910	0.77	+1.5
4,932,789	+		PFLU_RS21910	0.77	+1.7
4,932,789	+		PFLU_RS21910	0.77	+0.1
4,932,789	+		PFLU_RS21910	0.77	+1.1
4,932,789	+		PFLU_RS21910	0.77	+1.1
4,932,789	+		PFLU_RS21910	0.77	+1.8
4,932,789	+		PFLU_RS21910	0.77	-0.3
4,932,790	-		PFLU_RS21910	0.77	+0.5
4,932,790	-		PFLU_RS21910	0.77	+1.6
4,932,790	-		PFLU_RS21910	0.77	+0.1
4,932,790	-		PFLU_RS21910	0.77	+1.0
4,932,790	-		PFLU_RS21910	0.77	+2.0
4,932,790	-		PFLU_RS21910	0.77	+0.7
4,932,790	-		PFLU_RS21910	0.77	+0.6
4,932,790	-		PFLU_RS21910	0.77	-0.5
4,932,790	-		PFLU_RS21910	0.77	+0.1
4,932,790	-		PFLU_RS21910	0.77	+1.2
4,932,790	-		PFLU_RS21910	0.77	+0.7
4,932,937	-		PFLU_RS21910	0.83	+0.5
4,933,062	+		PFLU_RS21910	0.89	-0.5
4,933,062	+		PFLU_RS21910	0.89	+0.7
4,933,062	+		PFLU_RS21910	0.89	+0.8
4,933,062	+		PFLU_RS21910	0.89	-2.6
4,933,063	-		PFLU_RS21910	0.89	+1.4
4,933,063	-		PFLU_RS21910	0.89	+2.0
4,933,063	-		PFLU_RS21910	0.89	+0.4
4,933,063	-		PFLU_RS21910	0.89	-0.2
4,933,063	-		PFLU_RS21910	0.89	+1.1
4,933,063	-		PFLU_RS21910	0.89	+0.8
4,933,066	-		PFLU_RS21910	0.89	+0.3
4,933,088	+				+1.7
4,933,113	+				+1.7
4,933,114	-				+0.6
4,933,176	+				+0.5
4,933,176	+				+1.1
4,933,176	+				-0.5
4,933,177	-				+0.7
4,933,177	-				+0.6
4,933,177	-				+0.3
4,933,193	+				+0.4
4,933,193	+				+0.7
4,933,211	+				+1.4
4,933,212	-				+0.4
4,933,212	-				+0.6
4,933,212	-				+1.4
4,933,240	-				+0.5
4,933,240	-				-0.2
4,933,272	+				+0.3
4,933,272	+				+0.8
4,933,272	+				+1.3
4,933,272	+				-0.2
4,933,273	-				+0.5
4,933,273	-				+0.6
4,933,315	-				-0.8
4,933,315	-				+0.1
4,933,315	-				+0.0
4,933,315	-				+0.5
4,933,315	-				+0.2
4,933,315	-				+0.7
4,933,315	-				+1.0
4,933,315	-				-1.0
4,933,544	+		PFLU_RS21915	0.10	+0.1
4,933,544	+		PFLU_RS21915	0.10	-0.3
4,933,544	+		PFLU_RS21915	0.10	-0.2
4,933,544	+		PFLU_RS21915	0.10	+0.3
4,933,545	-		PFLU_RS21915	0.10	-0.1
4,933,545	-		PFLU_RS21915	0.10	-1.9
4,933,545	-		PFLU_RS21915	0.10	+0.5
4,933,950	+				+0.7
4,933,976	+				-1.0
4,933,977	-				+1.0
4,933,977	-				-0.2
4,933,979	+				+0.7
4,933,980	-				-2.2
4,933,987	+				-1.6
4,933,987	+				-0.6
4,933,987	+				-1.6
4,933,987	+				-0.2
4,933,987	+				+0.4
4,934,020	+				-0.4
4,934,020	+				-0.1
4,934,020	+				-1.5
4,934,020	+				-0.6
4,934,020	+				+0.2
4,934,020	+				+0.2
4,934,020	+				+0.8
4,934,020	+				+1.0
4,934,021	-				+1.3
4,934,021	-				+1.2
4,934,021	-				-0.1
4,934,021	-				+1.0
4,934,021	-				+0.7
4,934,021	-				+1.0
4,934,021	-				+0.8
4,934,021	-				-0.3
4,934,024	+				-0.5
4,934,024	+				-0.5
4,934,024	+				+0.1
4,934,024	+				-0.4
4,934,024	+				+0.5
4,934,024	+				-1.0
4,934,024	+				+0.1
4,934,024	+				+0.7
4,934,025	-				-0.3
4,934,025	-				+1.4
4,934,025	-				+2.2
4,934,025	-				-0.5
4,934,025	-				+1.3
4,934,025	-				+0.5
4,934,025	-				+1.1
4,934,025	-				+0.4
4,934,025	-				+0.8
4,934,025	-				+0.7
4,934,025	-				+0.5
4,934,036	-				-0.2
4,934,036	-				+1.0
4,934,036	-				+0.9
4,934,036	-				+1.7
4,934,036	-				+1.4
4,934,036	-				+1.0
4,934,036	-				+0.4
4,934,045	+				+0.0
4,934,045	+				+0.3
4,934,046	-				+1.1
4,934,089	+				+0.3
4,934,096	+				-0.3
4,934,096	+				-0.9
4,934,124	+				+0.4
4,934,273	+		PFLU_RS21920	0.10	-0.7
4,934,273	+		PFLU_RS21920	0.10	+0.2
4,934,273	+		PFLU_RS21920	0.10	-0.8
4,934,273	+		PFLU_RS21920	0.10	-0.9
4,934,274	-		PFLU_RS21920	0.10	+1.7
4,934,274	-		PFLU_RS21920	0.10	-1.3