Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21750

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,896,811	+		PFLU_RS21745	0.42	-0.7
4,896,930	+		PFLU_RS21745	0.49	+0.2
4,896,930	+		PFLU_RS21745	0.49	+0.2
4,896,930	+		PFLU_RS21745	0.49	+0.0
4,896,930	+		PFLU_RS21745	0.49	-0.9
4,896,959	+		PFLU_RS21745	0.51	-3.0
4,896,959	+		PFLU_RS21745	0.51	+1.2
4,896,959	+		PFLU_RS21745	0.51	+0.8
4,896,959	+		PFLU_RS21745	0.51	+0.1
4,896,959	+		PFLU_RS21745	0.51	+0.1
4,896,959	+		PFLU_RS21745	0.51	+1.3
4,896,960	-		PFLU_RS21745	0.51	-0.6
4,896,960	-		PFLU_RS21745	0.51	-0.6
4,897,124	+		PFLU_RS21745	0.60	+0.1
4,897,124	+		PFLU_RS21745	0.60	+1.3
4,897,124	+		PFLU_RS21745	0.60	+0.1
4,897,124	+		PFLU_RS21745	0.60	+0.1
4,897,124	+		PFLU_RS21745	0.60	-0.9
4,897,125	-		PFLU_RS21745	0.60	+0.1
4,897,125	-		PFLU_RS21745	0.60	+1.0
4,897,125	-		PFLU_RS21745	0.60	+0.8
4,897,125	-		PFLU_RS21745	0.60	+1.4
4,897,125	-		PFLU_RS21745	0.60	+0.0
4,897,125	-		PFLU_RS21745	0.60	+0.5
4,897,125	-		PFLU_RS21745	0.60	+0.1
4,897,220	+		PFLU_RS21745	0.66	+0.1
4,897,221	-		PFLU_RS21745	0.66	+0.7
4,897,257	-		PFLU_RS21745	0.68	-0.1
4,897,271	+		PFLU_RS21745	0.69	-0.8
4,897,296	+		PFLU_RS21745	0.70	-1.0
4,897,296	+		PFLU_RS21745	0.70	-0.3
4,897,296	+		PFLU_RS21745	0.70	-0.2
4,897,296	+		PFLU_RS21745	0.70	+0.1
4,897,296	+		PFLU_RS21745	0.70	+0.9
4,897,296	+		PFLU_RS21745	0.70	+0.6
4,897,296	+		PFLU_RS21745	0.70	-0.9
4,897,296	+		PFLU_RS21745	0.70	-1.7
4,897,296	+		PFLU_RS21745	0.70	-0.7
4,897,296	+		PFLU_RS21745	0.70	+0.6
4,897,296	+		PFLU_RS21745	0.70	+1.2
4,897,297	-		PFLU_RS21745	0.70	+0.3
4,897,297	-		PFLU_RS21745	0.70	+0.4
4,897,297	-		PFLU_RS21745	0.70	-1.8
4,897,297	-		PFLU_RS21745	0.70	+0.9
4,897,297	-		PFLU_RS21745	0.70	-0.1
4,897,297	-		PFLU_RS21745	0.70	-0.4
4,897,297	-		PFLU_RS21745	0.70	+0.2
4,897,297	-		PFLU_RS21745	0.70	+0.3
4,897,297	-		PFLU_RS21745	0.70	+0.6
4,897,297	-		PFLU_RS21745	0.70	+0.1
4,897,297	-		PFLU_RS21745	0.70	-2.7
4,897,358	+		PFLU_RS21745	0.74	+0.3
4,897,359	-		PFLU_RS21745	0.74	-2.3
4,897,463	+		PFLU_RS21745	0.80	+0.8
4,897,463	+		PFLU_RS21745	0.80	-2.2
4,897,463	+		PFLU_RS21745	0.80	-0.3
4,897,463	+		PFLU_RS21745	0.80	-0.5
4,897,463	+		PFLU_RS21745	0.80	+0.8
4,897,463	+		PFLU_RS21745	0.80	-1.2
4,897,463	+		PFLU_RS21745	0.80	+0.2
4,897,464	-		PFLU_RS21745	0.80	-1.2
4,897,464	-		PFLU_RS21745	0.80	-0.7
4,897,464	-		PFLU_RS21745	0.80	-0.2
4,897,464	-		PFLU_RS21745	0.80	-0.3
4,897,464	-		PFLU_RS21745	0.80	+0.1
4,897,768	+				+1.0
4,897,768	+				+0.1
4,897,768	+				+0.3
4,897,768	+				+0.4
4,897,769	-				-1.9
4,897,769	-				-0.1
4,897,769	-				+0.1
4,897,914	+		PFLU_RS21750	0.36	-0.2
4,897,914	+		PFLU_RS21750	0.36	+0.4
4,897,914	+		PFLU_RS21750	0.36	+1.8
4,897,914	+		PFLU_RS21750	0.36	+0.4
4,897,914	+		PFLU_RS21750	0.36	+0.3
4,897,914	+		PFLU_RS21750	0.36	-1.2
4,897,915	-		PFLU_RS21750	0.37	+0.8
4,897,915	-		PFLU_RS21750	0.37	+0.1
4,897,915	-		PFLU_RS21750	0.37	-0.0
4,897,915	-		PFLU_RS21750	0.37	+0.9
4,897,949	+		PFLU_RS21750	0.48	+0.4
4,897,949	+		PFLU_RS21750	0.48	+0.1
4,897,949	+		PFLU_RS21750	0.48	-0.3
4,897,950	-		PFLU_RS21750	0.48	+0.2
4,897,950	-		PFLU_RS21750	0.48	-2.0
4,897,950	-		PFLU_RS21750	0.48	-0.1
4,897,951	+		PFLU_RS21750	0.48	-0.3
4,897,951	+		PFLU_RS21750	0.48	+1.0
4,897,951	+		PFLU_RS21750	0.48	-0.6
4,897,951	+		PFLU_RS21750	0.48	+1.3
4,897,951	+		PFLU_RS21750	0.48	-0.2
4,897,951	+		PFLU_RS21750	0.48	+1.2
4,897,951	+		PFLU_RS21750	0.48	-0.9
4,897,951	+		PFLU_RS21750	0.48	+0.1
4,897,951	+		PFLU_RS21750	0.48	+1.8
4,897,951	+		PFLU_RS21750	0.48	-3.0
4,897,951	+		PFLU_RS21750	0.48	+0.4
4,897,951	+		PFLU_RS21750	0.48	+0.9
4,897,951	+		PFLU_RS21750	0.48	-0.9
4,897,951	+		PFLU_RS21750	0.48	-0.5
4,897,951	+		PFLU_RS21750	0.48	-0.0
4,897,951	+		PFLU_RS21750	0.48	+0.1
4,897,951	+		PFLU_RS21750	0.48	+0.6
4,897,951	+		PFLU_RS21750	0.48	-2.9
4,897,951	+		PFLU_RS21750	0.48	-0.4
4,897,951	+		PFLU_RS21750	0.48	-0.6
4,897,951	+		PFLU_RS21750	0.48	+0.0
4,897,951	+		PFLU_RS21750	0.48	-1.6
4,897,951	+		PFLU_RS21750	0.48	-0.4
4,897,951	+		PFLU_RS21750	0.48	-0.5
4,897,951	+		PFLU_RS21750	0.48	+0.2
4,897,951	+		PFLU_RS21750	0.48	+0.3
4,897,951	+		PFLU_RS21750	0.48	+0.8
4,897,951	+		PFLU_RS21750	0.48	+0.3
4,897,951	+		PFLU_RS21750	0.48	+2.4
4,897,951	+		PFLU_RS21750	0.48	+0.5
4,897,951	+		PFLU_RS21750	0.48	+0.5
4,897,951	+		PFLU_RS21750	0.48	+0.0
4,897,951	+		PFLU_RS21750	0.48	+0.2
4,897,951	+		PFLU_RS21750	0.48	+0.2
4,897,951	+		PFLU_RS21750	0.48	-0.6
4,897,951	+		PFLU_RS21750	0.48	-1.4
4,897,951	+		PFLU_RS21750	0.48	-0.9
4,897,952	-		PFLU_RS21750	0.49	-1.4
4,897,952	-		PFLU_RS21750	0.49	-0.2
4,897,952	-		PFLU_RS21750	0.49	-0.1
4,897,952	-		PFLU_RS21750	0.49	-1.6
4,897,952	-		PFLU_RS21750	0.49	-1.0
4,897,952	-		PFLU_RS21750	0.49	+0.0
4,897,952	-		PFLU_RS21750	0.49	+0.7
4,897,952	-		PFLU_RS21750	0.49	+0.7
4,897,952	-		PFLU_RS21750	0.49	-1.6
4,897,952	-		PFLU_RS21750	0.49	-0.1
4,897,952	-		PFLU_RS21750	0.49	+0.0
4,897,952	-		PFLU_RS21750	0.49	-0.1
4,897,952	-		PFLU_RS21750	0.49	+1.2
4,897,952	-		PFLU_RS21750	0.49	-0.1
4,897,952	-		PFLU_RS21750	0.49	+1.6
4,897,952	-		PFLU_RS21750	0.49	+0.9
4,897,952	-		PFLU_RS21750	0.49	+0.3
4,897,952	-		PFLU_RS21750	0.49	+0.1
4,897,952	-		PFLU_RS21750	0.49	+2.3
4,897,952	-		PFLU_RS21750	0.49	+0.8
4,897,952	-		PFLU_RS21750	0.49	-0.9
4,897,952	-		PFLU_RS21750	0.49	-1.0
4,897,952	-		PFLU_RS21750	0.49	-0.7
4,897,952	-		PFLU_RS21750	0.49	+1.4
4,897,952	-		PFLU_RS21750	0.49	+0.1
4,897,978	+		PFLU_RS21750	0.57	-0.9
4,897,978	+		PFLU_RS21750	0.57	-1.0
4,897,979	-		PFLU_RS21750	0.58	+0.2
4,897,979	-		PFLU_RS21750	0.58	-1.7
4,897,979	-		PFLU_RS21750	0.58	-0.3
4,897,979	-		PFLU_RS21750	0.58	+0.5
4,897,979	-		PFLU_RS21750	0.58	-0.1
4,897,979	-		PFLU_RS21750	0.58	-1.2
4,897,979	-		PFLU_RS21750	0.58	+0.3
4,897,979	-		PFLU_RS21750	0.58	+0.5
4,897,979	-		PFLU_RS21750	0.58	+0.5
4,897,979	-		PFLU_RS21750	0.58	-1.2
4,897,996	+		PFLU_RS21750	0.63	-0.2
4,897,996	+		PFLU_RS21750	0.63	+0.9
4,897,997	-		PFLU_RS21750	0.63	-0.3
4,897,997	-		PFLU_RS21750	0.63	+0.4
4,897,997	-		PFLU_RS21750	0.63	-0.7
4,897,997	-		PFLU_RS21750	0.63	+0.6
4,897,997	-		PFLU_RS21750	0.63	-1.4
4,897,997	-		PFLU_RS21750	0.63	-1.4
4,898,088	+				-0.2
4,898,088	+				+0.6
4,898,088	+				-0.4
4,898,088	+				+0.2
4,898,088	+				+1.8
4,898,089	-				+1.0
4,898,089	-				+0.1
4,898,089	-				-0.1
4,898,089	-				+1.7
4,898,089	-				+0.8
4,898,089	-				+1.0
4,898,089	-				+0.7
4,898,089	-				+2.6
4,898,147	-				-1.3
4,898,147	-				+0.1
4,898,203	+				+0.5
4,898,203	+				-0.0
4,898,204	-				+0.6
4,898,204	-				-0.5
4,898,204	-				+1.7
4,898,204	-				-0.9
4,898,204	-				-0.4
4,898,204	-				+0.2
4,898,204	-				-2.8
4,898,204	-				+1.6
4,898,210	-				-0.7
4,898,210	-				-0.0
4,898,261	+				+1.0
4,898,261	+				-0.5
4,898,261	+				+1.4
4,898,261	+				+0.2
4,898,261	+				+0.3
4,898,262	-				-0.4
4,898,268	-				-0.6
4,898,336	+				+0.6
4,898,336	+				-0.4
4,898,336	+				+0.2
4,898,358	+				+0.3
4,898,371	+				+0.8
4,898,371	+				-0.7
4,898,372	-				-0.5
4,898,372	-				+0.6
4,898,372	-				+0.8
4,898,372	-				+1.3
4,898,372	-				+0.8
4,898,372	-				-0.2
4,898,374	+				-1.4
4,898,374	+				+0.9
4,898,374	+				-0.0
4,898,374	+				-0.4
4,898,374	+				-0.6
4,898,375	-				+1.0
4,898,375	-				+0.8
4,898,375	-				-0.1
4,898,375	-				+1.1
4,898,375	-				+1.7
4,898,375	-				-0.9
4,898,375	-				+0.6
4,898,375	-				-0.5
4,898,375	-				-0.6
4,898,375	-				-0.6
4,898,375	-				+1.1
4,898,459	+		PFLU_RS21755	0.20	+2.0
4,898,461	+		PFLU_RS21755	0.20	+1.5
4,898,461	+		PFLU_RS21755	0.20	-0.2
4,898,461	+		PFLU_RS21755	0.20	+1.3
4,898,461	+		PFLU_RS21755	0.20	+0.4
4,898,461	+		PFLU_RS21755	0.20	+1.1
4,898,461	+		PFLU_RS21755	0.20	+1.6
4,898,461	+		PFLU_RS21755	0.20	+0.5
4,898,461	+		PFLU_RS21755	0.20	+0.8
4,898,462	-		PFLU_RS21755	0.20	+1.1
4,898,462	-		PFLU_RS21755	0.20	+1.3
4,898,462	-		PFLU_RS21755	0.20	+1.2
4,898,462	-		PFLU_RS21755	0.20	+1.0
4,898,462	-		PFLU_RS21755	0.20	+1.3
4,898,462	-		PFLU_RS21755	0.20	+1.5
4,898,462	-		PFLU_RS21755	0.20	+0.2
4,898,462	-		PFLU_RS21755	0.20	+1.5
4,898,609	-		PFLU_RS21755	0.53	+1.8
4,898,669	-		PFLU_RS21755	0.66	+1.3
4,898,669	-		PFLU_RS21755	0.66	+0.2
4,898,669	-		PFLU_RS21755	0.66	+1.4
4,898,702	+		PFLU_RS21755	0.74	+1.1
4,898,702	+		PFLU_RS21755	0.74	+2.2
4,898,703	-		PFLU_RS21755	0.74	+0.9
4,898,735	-		PFLU_RS21755	0.81	+0.0
4,898,825	-				+0.9
4,898,911	+				+1.3
4,898,911	+				-0.9
4,898,911	+				+0.8
4,898,911	+				+0.2
4,898,911	+				+1.3
4,898,912	-				+1.7
4,898,912	-				+0.6
4,898,912	-				+0.5
4,898,912	-				+0.8
4,898,912	-				+1.5
4,898,912	-				+1.8
4,898,912	-				+2.8
4,898,974	+		PFLU_RS21760	0.11	+1.0
4,898,974	+		PFLU_RS21760	0.11	+1.5
4,898,974	+		PFLU_RS21760	0.11	+1.3
4,898,974	+		PFLU_RS21760	0.11	+1.1
4,898,974	+		PFLU_RS21760	0.11	+0.8
4,898,975	-		PFLU_RS21760	0.11	+0.6
4,898,975	-		PFLU_RS21760	0.11	+1.6
4,898,975	-		PFLU_RS21760	0.11	+1.2