Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21740

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,895,025	+		PFLU_RS21735	0.80	+1.9
4,895,025	+		PFLU_RS21735	0.80	+2.7
4,895,025	+		PFLU_RS21735	0.80	+1.4
4,895,025	+		PFLU_RS21735	0.80	+0.5
4,895,025	+		PFLU_RS21735	0.80	+0.5
4,895,025	+		PFLU_RS21735	0.80	+1.0
4,895,298	+				-0.5
4,895,298	+				-1.2
4,895,298	+				-0.5
4,895,298	+				+0.7
4,895,298	+				-1.0
4,895,298	+				+1.6
4,895,298	+				-0.1
4,895,298	+				+1.4
4,895,299	-				-0.2
4,895,299	-				+1.1
4,895,299	-				+1.7
4,895,302	+				-0.0
4,895,302	+				-0.3
4,895,302	+				-0.3
4,895,302	+				+0.5
4,895,302	+				+1.9
4,895,302	+				+0.2
4,895,302	+				-0.6
4,895,302	+				-0.4
4,895,302	+				-0.1
4,895,302	+				+1.9
4,895,302	+				-2.5
4,895,302	+				-0.8
4,895,302	+				+0.2
4,895,302	+				-1.1
4,895,303	-				-1.0
4,895,303	-				-1.4
4,895,303	-				+0.0
4,895,303	-				-0.3
4,895,303	-				-0.7
4,895,303	-				-1.3
4,895,303	-				-0.6
4,895,303	-				+0.3
4,895,303	-				+0.3
4,895,303	-				-0.0
4,895,303	-				-1.4
4,895,337	+				+0.4
4,895,337	+				+1.1
4,895,337	+				+0.5
4,895,338	-				-0.6
4,895,338	-				+0.9
4,895,338	-				+0.5
4,895,341	+				+2.0
4,895,342	-				+0.1
4,895,347	+				+0.5
4,895,347	+				-0.4
4,895,348	-				-0.1
4,895,378	-				+0.4
4,895,383	+				-1.7
4,895,384	-				-0.2
4,895,473	+				-0.1
4,895,473	+				+0.1
4,895,473	+				-0.9
4,895,473	+				-0.1
4,895,473	+				+0.8
4,895,473	+				-0.8
4,895,474	-				+0.4
4,895,474	-				+1.7
4,895,474	-				+0.6
4,895,474	-				-0.6
4,895,474	-				-0.2
4,895,474	-				-1.1
4,895,474	-				+0.4
4,895,474	-				+0.3
4,895,474	-				-0.1
4,895,486	-				+0.7
4,895,486	-				+0.6
4,895,486	-				-2.4
4,895,486	-				+2.0
4,895,489	+				+0.3
4,895,489	+				-0.3
4,895,489	+				-1.2
4,895,489	+				-0.7
4,895,489	+				+0.6
4,895,489	+				+0.2
4,895,490	-				+0.6
4,895,490	-				+0.1
4,895,490	-				-0.3
4,895,490	-				+0.5
4,895,526	+				+0.2
4,895,526	+				-1.0
4,895,527	-				+0.3
4,895,527	-				+0.8
4,895,544	-				+0.4
4,895,544	-				+0.1
4,895,544	-				-0.0
4,895,544	-				+0.8
4,895,547	-				+0.8
4,895,547	-				+0.7
4,895,547	-				+1.2
4,895,547	-				-0.3
4,895,547	-				+0.4
4,895,547	-				+0.3
4,895,547	-				+0.1
4,895,547	-				+2.1
4,895,547	-				-0.7
4,895,547	-				-0.4
4,895,596	+				+0.8
4,895,612	+				+0.1
4,895,612	+				+0.0
4,895,612	+				+0.4
4,895,612	+				+0.4
4,895,645	+				+0.0
4,895,645	+				+0.6
4,895,645	+				-1.8
4,895,645	+				+0.2
4,895,646	-				-1.9
4,895,660	+				-0.3
4,895,660	+				+0.2
4,895,661	-				-2.0
4,895,661	-				+1.4
4,895,686	+				+0.0
4,895,686	+				-0.9
4,895,687	-				+0.1
4,895,687	-				+0.1
4,895,690	+				-0.1
4,895,690	+				+1.6
4,895,690	+				+0.2
4,895,690	+				+0.4
4,895,690	+				+1.3
4,895,690	+				-0.6
4,895,690	+				-0.1
4,895,690	+				+1.4
4,895,690	+				-0.5
4,895,690	+				+0.4
4,895,690	+				-0.3
4,895,690	+				+0.3
4,895,690	+				+0.2
4,895,690	+				-0.6
4,895,690	+				-1.1
4,895,690	+				-0.7
4,895,690	+				+1.4
4,895,690	+				+0.9
4,895,690	+				+0.5
4,895,690	+				-0.5
4,895,690	+				+0.9
4,895,690	+				+0.1
4,895,690	+				+1.0
4,895,690	+				+2.0
4,895,690	+				+0.8
4,895,690	+				-0.7
4,895,690	+				+0.1
4,895,690	+				-0.1
4,895,690	+				-2.4
4,895,690	+				-0.8
4,895,690	+				-0.1
4,895,690	+				-1.0
4,895,690	+				+1.2
4,895,690	+				-1.1
4,895,690	+				-0.4
4,895,690	+				-0.8
4,895,690	+				+0.7
4,895,690	+				-0.1
4,895,690	+				-0.0
4,895,691	-				+0.7
4,895,691	-				+1.1
4,895,691	-				+0.6
4,895,691	-				+0.4
4,895,691	-				+0.3
4,895,691	-				+0.2
4,895,691	-				+0.4
4,895,691	-				-1.5
4,895,691	-				+0.2
4,895,691	-				+0.8
4,895,691	-				-3.7
4,895,691	-				-1.3
4,895,691	-				-0.9
4,895,691	-				+0.6
4,895,691	-				+0.2
4,895,691	-				-1.6
4,895,691	-				-0.1
4,895,691	-				+0.5
4,895,691	-				+0.3
4,895,691	-				+0.0
4,895,691	-				-0.8
4,895,691	-				+0.2
4,895,691	-				+0.9
4,895,691	-				+0.4
4,895,691	-				+0.2
4,895,691	-				+0.2
4,895,691	-				+0.7
4,895,691	-				+0.6
4,895,691	-				+0.3
4,895,691	-				-0.5
4,895,691	-				-1.3
4,895,691	-				-0.3
4,895,691	-				-0.0
4,895,691	-				-1.1
4,895,691	-				-0.6
4,895,691	-				-0.1
4,895,691	-				+0.7
4,895,691	-				-0.6
4,895,691	-				-0.0
4,895,691	-				+0.5
4,895,691	-				+0.2
4,895,691	-				+0.1
4,895,691	-				+0.1
4,895,691	-				-1.1
4,895,691	-				+0.7
4,895,691	-				-1.3
4,895,691	-				+0.1
4,895,735	+				+0.1
4,895,735	+				+0.4
4,895,735	+				-0.6
4,895,735	+				-0.9
4,895,735	+				+0.7
4,895,735	+				+1.7
4,895,736	-				-0.3
4,895,736	-				+1.8
4,895,736	-				+0.7
4,895,736	-				+0.9
4,895,736	-				-0.8
4,895,736	-				+0.1
4,895,736	-				-1.1
4,895,892	+		PFLU_RS21740	0.53	-0.6
4,895,892	+		PFLU_RS21740	0.53	-0.4
4,895,892	+		PFLU_RS21740	0.53	-0.0
4,895,892	+		PFLU_RS21740	0.53	-1.4
4,895,892	+		PFLU_RS21740	0.53	+0.0
4,895,892	+		PFLU_RS21740	0.53	-0.3
4,895,892	+		PFLU_RS21740	0.53	+1.2
4,895,892	+		PFLU_RS21740	0.53	+0.9
4,895,892	+		PFLU_RS21740	0.53	+1.0
4,895,892	+		PFLU_RS21740	0.53	-0.9
4,895,892	+		PFLU_RS21740	0.53	+1.6
4,895,892	+		PFLU_RS21740	0.53	+0.8
4,895,892	+		PFLU_RS21740	0.53	+1.9
4,895,892	+		PFLU_RS21740	0.53	+1.1
4,895,892	+		PFLU_RS21740	0.53	-3.2
4,895,892	+		PFLU_RS21740	0.53	+0.6
4,895,892	+		PFLU_RS21740	0.53	+1.0
4,895,892	+		PFLU_RS21740	0.53	+1.1
4,895,892	+		PFLU_RS21740	0.53	+0.9
4,895,893	-		PFLU_RS21740	0.53	-0.6
4,895,893	-		PFLU_RS21740	0.53	-0.0
4,895,893	-		PFLU_RS21740	0.53	+0.6
4,895,893	-		PFLU_RS21740	0.53	+1.3
4,895,893	-		PFLU_RS21740	0.53	-0.3
4,895,893	-		PFLU_RS21740	0.53	-2.0
4,895,893	-		PFLU_RS21740	0.53	+0.4
4,895,893	-		PFLU_RS21740	0.53	+0.8
4,895,893	-		PFLU_RS21740	0.53	+0.1
4,895,893	-		PFLU_RS21740	0.53	-1.5
4,895,893	-		PFLU_RS21740	0.53	+1.0
4,895,893	-		PFLU_RS21740	0.53	+0.0
4,895,934	+		PFLU_RS21740	0.65	+0.1
4,895,934	+		PFLU_RS21740	0.65	-0.7
4,896,046	+				+0.4
4,896,046	+				-1.9
4,896,046	+				+0.9
4,896,046	+				+2.4
4,896,046	+				+0.3
4,896,047	-				-0.2
4,896,047	-				-1.4
4,896,047	-				+0.9
4,896,047	-				+1.4
4,896,047	-				-0.1
4,896,047	-				-1.9
4,896,047	-				+1.1
4,896,047	-				+0.8
4,896,047	-				+1.0
4,896,047	-				-0.2
4,896,047	-				-0.2
4,896,090	-				+1.0
4,896,090	-				-0.4
4,896,090	-				-0.1
4,896,148	+				+0.4
4,896,148	+				+1.1
4,896,148	+				-0.7
4,896,148	+				+0.7
4,896,149	-				+1.1
4,896,149	-				+0.7
4,896,149	-				+0.5
4,896,316	+		PFLU_RS21745	0.13	-0.7
4,896,316	+		PFLU_RS21745	0.13	-0.4
4,896,316	+		PFLU_RS21745	0.13	+0.3
4,896,316	+		PFLU_RS21745	0.13	-1.2
4,896,316	+		PFLU_RS21745	0.13	+1.2
4,896,316	+		PFLU_RS21745	0.13	-0.5
4,896,316	+		PFLU_RS21745	0.13	+1.3
4,896,316	+		PFLU_RS21745	0.13	-0.6
4,896,316	+		PFLU_RS21745	0.13	+0.2
4,896,316	+		PFLU_RS21745	0.13	-0.6
4,896,316	+		PFLU_RS21745	0.13	-0.4
4,896,316	+		PFLU_RS21745	0.13	+0.1
4,896,316	+		PFLU_RS21745	0.13	-0.3
4,896,316	+		PFLU_RS21745	0.13	+0.8
4,896,316	+		PFLU_RS21745	0.13	-2.0
4,896,316	+		PFLU_RS21745	0.13	+0.7
4,896,316	+		PFLU_RS21745	0.13	-0.4
4,896,317	-		PFLU_RS21745	0.13	-0.9
4,896,317	-		PFLU_RS21745	0.13	-1.0
4,896,317	-		PFLU_RS21745	0.13	-0.1
4,896,317	-		PFLU_RS21745	0.13	-0.4
4,896,317	-		PFLU_RS21745	0.13	+0.8
4,896,317	-		PFLU_RS21745	0.13	+0.5
4,896,317	-		PFLU_RS21745	0.13	+0.7
4,896,317	-		PFLU_RS21745	0.13	-0.4
4,896,317	-		PFLU_RS21745	0.13	-0.3
4,896,317	-		PFLU_RS21745	0.13	+1.4
4,896,317	-		PFLU_RS21745	0.13	+0.3
4,896,317	-		PFLU_RS21745	0.13	+0.1
4,896,317	-		PFLU_RS21745	0.13	+0.2
4,896,317	-		PFLU_RS21745	0.13	+0.5
4,896,317	-		PFLU_RS21745	0.13	-0.1
4,896,317	-		PFLU_RS21745	0.13	-0.1
4,896,317	-		PFLU_RS21745	0.13	+1.4
4,896,317	-		PFLU_RS21745	0.13	+1.1
4,896,317	-		PFLU_RS21745	0.13	-2.5
4,896,317	-		PFLU_RS21745	0.13	-0.7
4,896,317	-		PFLU_RS21745	0.13	-0.4
4,896,317	-		PFLU_RS21745	0.13	-0.1
4,896,317	-		PFLU_RS21745	0.13	-2.0
4,896,317	-		PFLU_RS21745	0.13	-0.7
4,896,318	+		PFLU_RS21745	0.13	+0.4
4,896,318	+		PFLU_RS21745	0.13	-0.0
4,896,318	+		PFLU_RS21745	0.13	+0.9
4,896,318	+		PFLU_RS21745	0.13	+0.9
4,896,318	+		PFLU_RS21745	0.13	+0.4
4,896,440	+		PFLU_RS21745	0.20	+1.3
4,896,440	+		PFLU_RS21745	0.20	-3.1
4,896,440	+		PFLU_RS21745	0.20	-0.3
4,896,441	-		PFLU_RS21745	0.21	+0.9
4,896,441	-		PFLU_RS21745	0.21	-1.8
4,896,441	-		PFLU_RS21745	0.21	-0.3
4,896,461	+		PFLU_RS21745	0.22	+0.8
4,896,461	+		PFLU_RS21745	0.22	-0.9
4,896,462	-		PFLU_RS21745	0.22	+0.2
4,896,462	-		PFLU_RS21745	0.22	+1.9
4,896,462	-		PFLU_RS21745	0.22	-3.0
4,896,519	-		PFLU_RS21745	0.25	-0.7
4,896,533	+		PFLU_RS21745	0.26	+0.6
4,896,533	+		PFLU_RS21745	0.26	-1.0
4,896,533	+		PFLU_RS21745	0.26	+0.6
4,896,534	-		PFLU_RS21745	0.26	+0.0
4,896,534	-		PFLU_RS21745	0.26	-1.3
4,896,541	+		PFLU_RS21745	0.26	+1.0
4,896,541	+		PFLU_RS21745	0.26	+1.9
4,896,541	+		PFLU_RS21745	0.26	-1.2
4,896,542	-		PFLU_RS21745	0.26	+0.6
4,896,542	-		PFLU_RS21745	0.26	+1.2
4,896,608	+		PFLU_RS21745	0.30	-1.7
4,896,609	-		PFLU_RS21745	0.30	+1.1
4,896,609	-		PFLU_RS21745	0.30	-0.2
4,896,609	-		PFLU_RS21745	0.30	-0.1
4,896,609	-		PFLU_RS21745	0.30	-0.8
4,896,609	-		PFLU_RS21745	0.30	+0.1
4,896,609	-		PFLU_RS21745	0.30	+0.0
4,896,609	-		PFLU_RS21745	0.30	-0.3
4,896,609	-		PFLU_RS21745	0.30	+1.2
4,896,724	+		PFLU_RS21745	0.37	+0.8
4,896,725	-		PFLU_RS21745	0.37	+0.9
4,896,811	+		PFLU_RS21745	0.42	-0.7
4,896,930	+		PFLU_RS21745	0.49	+0.2
4,896,930	+		PFLU_RS21745	0.49	+0.2
4,896,930	+		PFLU_RS21745	0.49	+0.0
4,896,930	+		PFLU_RS21745	0.49	-0.9
4,896,959	+		PFLU_RS21745	0.51	-3.0
4,896,959	+		PFLU_RS21745	0.51	+1.2
4,896,959	+		PFLU_RS21745	0.51	+0.8
4,896,959	+		PFLU_RS21745	0.51	+0.1
4,896,959	+		PFLU_RS21745	0.51	+0.1
4,896,959	+		PFLU_RS21745	0.51	+1.3
4,896,960	-		PFLU_RS21745	0.51	-0.6
4,896,960	-		PFLU_RS21745	0.51	-0.6