Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS20550

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
4,626,149	+		PFLU_RS20545	0.56	+0.2
4,626,149	+		PFLU_RS20545	0.56	-1.4
4,626,150	-		PFLU_RS20545	0.56	-0.2
4,626,150	-		PFLU_RS20545	0.56	-0.9
4,626,150	-		PFLU_RS20545	0.56	-2.4
4,626,150	-		PFLU_RS20545	0.56	+0.4
4,626,150	-		PFLU_RS20545	0.56	-0.2
4,626,150	-		PFLU_RS20545	0.56	+0.9
4,626,158	+		PFLU_RS20545	0.57	-1.9
4,626,158	+		PFLU_RS20545	0.57	+0.8
4,626,158	+		PFLU_RS20545	0.57	+0.9
4,626,158	+		PFLU_RS20545	0.57	+0.7
4,626,158	+		PFLU_RS20545	0.57	-1.4
4,626,158	+		PFLU_RS20545	0.57	+2.2
4,626,159	-		PFLU_RS20545	0.57	-0.6
4,626,159	-		PFLU_RS20545	0.57	-0.4
4,626,159	-		PFLU_RS20545	0.57	-1.2
4,626,252	+		PFLU_RS20545	0.69	-0.2
4,626,255	+		PFLU_RS20545	0.69	+0.6
4,626,255	+		PFLU_RS20545	0.69	-0.0
4,626,256	-		PFLU_RS20545	0.69	-0.1
4,626,343	-		PFLU_RS20545	0.80	-0.7
4,626,467	+				+0.4
4,626,467	+				-0.8
4,626,467	+				+1.0
4,626,467	+				+0.5
4,626,467	+				-0.5
4,626,467	+				+0.6
4,626,467	+				+0.6
4,626,468	-				+0.7
4,626,468	-				-0.9
4,626,468	-				+0.6
4,626,468	-				+0.1
4,626,491	+				-2.3
4,626,492	-				+0.7
4,626,492	-				-0.2
4,626,525	+				-1.9
4,626,525	+				+0.4
4,626,526	-				+0.1
4,626,526	-				-0.2
4,626,529	+				+1.4
4,626,529	+				+0.5
4,626,529	+				+0.8
4,626,529	+				+1.7
4,626,529	+				-1.7
4,626,529	+				-0.4
4,626,529	+				-2.2
4,626,529	+				-0.1
4,626,530	-				+1.4
4,626,530	-				-0.4
4,626,530	-				-0.3
4,626,530	-				-1.2
4,626,530	-				-0.1
4,626,530	-				+0.4
4,626,530	-				+0.8
4,626,531	+				+0.0
4,626,531	+				+1.1
4,626,531	+				+0.3
4,626,532	-				+0.6
4,626,532	-				+1.2
4,626,532	-				+0.8
4,626,532	-				+0.2
4,626,575	+				-0.9
4,626,576	-				-1.3
4,626,576	-				-0.4
4,626,578	+				-1.2
4,626,578	+				+1.8
4,626,578	+				+0.5
4,626,578	+				+0.6
4,626,578	+				+0.7
4,626,579	-				-1.5
4,626,579	-				-0.3
4,626,579	-				+0.2
4,626,579	-				+0.0
4,626,579	-				+0.7
4,626,579	-				+0.1
4,626,579	-				+0.3
4,626,579	-				+0.5
4,626,579	-				+0.5
4,626,580	+				+0.2
4,626,580	+				-1.4
4,626,580	+				+1.3
4,626,580	+				+0.4
4,626,580	+				+0.7
4,626,581	-				-1.2
4,626,590	+				-0.2
4,626,590	+				-1.2
4,626,591	-				-1.2
4,626,591	-				-0.6
4,626,591	-				+0.1
4,626,613	-				-1.1
4,626,681	-				+0.6
4,626,681	-				-0.1
4,626,724	+				+0.4
4,626,724	+				+0.3
4,626,724	+				-0.4
4,626,724	+				-0.2
4,626,744	+				+0.0
4,626,744	+				-1.4
4,626,744	+				-1.1
4,626,744	+				-0.1
4,626,744	+				-1.8
4,626,745	-				-0.0
4,626,745	-				+0.6
4,626,795	+				-0.1
4,626,796	-				-2.5
4,626,799	+				-0.4
4,626,901	+				+2.1
4,626,902	-				+1.1
4,626,903	+				+1.2
4,626,903	+				+0.8
4,626,903	+				+1.0
4,626,903	+				+2.2
4,626,903	+				+1.3
4,626,903	+				+0.7
4,626,903	+				+0.7
4,626,903	+				-0.9
4,626,903	+				+1.3
4,626,903	+				+1.2
4,626,903	+				+1.8
4,626,903	+				+1.0
4,626,903	+				-0.0
4,626,903	+				+0.2
4,626,904	-				-1.0
4,626,904	-				+1.1
4,626,904	-				+0.7
4,626,904	-				+0.5
4,626,904	-				+0.6
4,626,904	-				+1.1
4,626,904	-				+0.6
4,626,904	-				+0.4
4,626,904	-				+0.1
4,627,467	+		PFLU_RS20550	0.26	+0.3
4,627,476	+		PFLU_RS20550	0.27	+0.7
4,627,476	+		PFLU_RS20550	0.27	+1.0
4,627,476	+		PFLU_RS20550	0.27	+1.0
4,627,476	+		PFLU_RS20550	0.27	+1.1
4,627,476	+		PFLU_RS20550	0.27	+1.2
4,627,476	+		PFLU_RS20550	0.27	+1.8
4,627,477	-		PFLU_RS20550	0.27	+0.2
4,627,477	-		PFLU_RS20550	0.27	+0.3
4,627,477	-		PFLU_RS20550	0.27	+2.3
4,627,477	-		PFLU_RS20550	0.27	-0.0
4,627,477	-		PFLU_RS20550	0.27	+1.6
4,627,644	+		PFLU_RS20550	0.33	+0.4
4,627,644	+		PFLU_RS20550	0.33	+0.8
4,627,645	-		PFLU_RS20550	0.33	+1.2
4,628,090	+		PFLU_RS20550	0.51	+0.9
4,628,091	-		PFLU_RS20550	0.51	+0.3
4,628,696	+		PFLU_RS20550	0.74	+1.4
4,628,696	+		PFLU_RS20550	0.74	+1.3
4,628,696	+		PFLU_RS20550	0.74	+0.6
4,628,696	+		PFLU_RS20550	0.74	+0.7
4,628,696	+		PFLU_RS20550	0.74	+0.0
4,628,696	+		PFLU_RS20550	0.74	+0.5
4,628,696	+		PFLU_RS20550	0.74	+0.4
4,628,696	+		PFLU_RS20550	0.74	+0.8
4,628,696	+		PFLU_RS20550	0.74	+0.9
4,628,696	+		PFLU_RS20550	0.74	+1.0
4,628,697	-		PFLU_RS20550	0.74	+0.4
4,628,697	-		PFLU_RS20550	0.74	+1.0
4,628,731	+		PFLU_RS20550	0.76	+1.3
4,628,743	+		PFLU_RS20550	0.76	+1.0
4,628,982	+		PFLU_RS20550	0.85	+0.8
4,628,983	-		PFLU_RS20550	0.85	+0.7
4,629,004	+		PFLU_RS20550	0.86	+0.6
4,629,005	-		PFLU_RS20550	0.86	-0.1
4,629,032	+		PFLU_RS20550	0.87	+0.6
4,629,032	+		PFLU_RS20550	0.87	+0.5
4,629,032	+		PFLU_RS20550	0.87	+0.7
4,629,032	+		PFLU_RS20550	0.87	+1.1
4,629,032	+		PFLU_RS20550	0.87	+0.5
4,629,032	+		PFLU_RS20550	0.87	+0.4
4,629,032	+		PFLU_RS20550	0.87	+0.3
4,629,032	+		PFLU_RS20550	0.87	+0.6
4,629,033	-		PFLU_RS20550	0.87	+0.7
4,629,033	-		PFLU_RS20550	0.87	+1.7
4,629,033	-		PFLU_RS20550	0.87	+0.3
4,629,033	-		PFLU_RS20550	0.87	+1.9
4,629,033	-		PFLU_RS20550	0.87	-1.2
4,629,033	-		PFLU_RS20550	0.87	+0.8
4,629,033	-		PFLU_RS20550	0.87	+1.2
4,629,033	-		PFLU_RS20550	0.87	+0.3
4,629,033	-		PFLU_RS20550	0.87	+1.2
4,629,033	-		PFLU_RS20550	0.87	+0.5
4,629,033	-		PFLU_RS20550	0.87	+0.1
4,629,036	+		PFLU_RS20550	0.88	+0.1
4,629,036	+		PFLU_RS20550	0.88	+1.3
4,629,036	+		PFLU_RS20550	0.88	+0.8
4,629,036	+		PFLU_RS20550	0.88	+0.9
4,629,036	+		PFLU_RS20550	0.88	+1.4
4,629,036	+		PFLU_RS20550	0.88	+1.4
4,629,036	+		PFLU_RS20550	0.88	-1.4
4,629,036	+		PFLU_RS20550	0.88	+0.2
4,629,036	+		PFLU_RS20550	0.88	-1.6
4,629,036	+		PFLU_RS20550	0.88	+1.5
4,629,037	-		PFLU_RS20550	0.88	+1.5
4,629,037	-		PFLU_RS20550	0.88	+1.9
4,629,037	-		PFLU_RS20550	0.88	+0.5
4,629,037	-		PFLU_RS20550	0.88	+0.9
4,629,295	+				+0.6
4,629,330	-				-0.3
4,629,356	-				-0.0
4,629,412	+				+1.3
4,629,431	-				+0.3
4,629,431	-				+0.2
4,629,455	+				-0.6
4,629,455	+				+0.4
4,629,456	-				-0.3
4,629,456	-				-0.2
4,629,456	-				+0.7
4,629,472	-				+0.3
4,629,472	-				+0.3
4,629,472	-				-2.8
4,629,472	-				-0.6
4,629,483	-				-0.2
4,629,494	-				+0.8
4,629,510	+				+0.7
4,629,510	+				+0.8
4,629,510	+				-0.3
4,629,511	-				+0.7
4,629,517	+				+0.3
4,629,517	+				+0.2
4,629,518	-				-1.7
4,629,518	-				-1.5
4,629,553	-				+0.7
4,629,579	+				-0.0
4,629,579	+				+0.1
4,629,579	+				+0.2
4,629,579	+				+1.1
4,629,580	-				-2.0
4,629,580	-				-0.7
4,629,584	+				-0.2
4,629,606	+				-2.6
4,629,606	+				-1.6
4,629,606	+				-1.2
4,629,606	+				-1.9
4,629,645	+		PFLU_RS20555	0.13	-0.2
4,629,646	-		PFLU_RS20555	0.13	+0.8
4,629,646	-		PFLU_RS20555	0.13	+1.2
4,629,646	-		PFLU_RS20555	0.13	+0.4
4,629,646	-		PFLU_RS20555	0.13	+0.6
4,629,649	+		PFLU_RS20555	0.13	+0.2
4,629,649	+		PFLU_RS20555	0.13	+0.2
4,629,649	+		PFLU_RS20555	0.13	+2.9
4,629,649	+		PFLU_RS20555	0.13	+0.9
4,629,649	+		PFLU_RS20555	0.13	-0.4
4,629,649	+		PFLU_RS20555	0.13	+0.2
4,629,649	+		PFLU_RS20555	0.13	-0.2
4,629,649	+		PFLU_RS20555	0.13	+1.2
4,629,649	+		PFLU_RS20555	0.13	+1.4
4,629,649	+		PFLU_RS20555	0.13	+0.1
4,629,649	+		PFLU_RS20555	0.13	+0.1
4,629,649	+		PFLU_RS20555	0.13	-0.7
4,629,649	+		PFLU_RS20555	0.13	+0.4
4,629,649	+		PFLU_RS20555	0.13	-1.4
4,629,649	+		PFLU_RS20555	0.13	+0.1
4,629,649	+		PFLU_RS20555	0.13	-0.5
4,629,649	+		PFLU_RS20555	0.13	-0.0
4,629,649	+		PFLU_RS20555	0.13	+0.2
4,629,649	+		PFLU_RS20555	0.13	+1.1
4,629,649	+		PFLU_RS20555	0.13	+0.4
4,629,649	+		PFLU_RS20555	0.13	+0.7
4,629,649	+		PFLU_RS20555	0.13	-0.4
4,629,649	+		PFLU_RS20555	0.13	-1.2
4,629,649	+		PFLU_RS20555	0.13	+0.3
4,629,649	+		PFLU_RS20555	0.13	-2.0
4,629,649	+		PFLU_RS20555	0.13	+0.5
4,629,649	+		PFLU_RS20555	0.13	+2.3
4,629,649	+		PFLU_RS20555	0.13	-0.1
4,629,649	+		PFLU_RS20555	0.13	-0.7
4,629,649	+		PFLU_RS20555	0.13	-0.1
4,629,649	+		PFLU_RS20555	0.13	+0.0
4,629,650	-		PFLU_RS20555	0.13	+0.7
4,629,650	-		PFLU_RS20555	0.13	+0.1
4,629,650	-		PFLU_RS20555	0.13	-3.2
4,629,650	-		PFLU_RS20555	0.13	-0.5
4,629,650	-		PFLU_RS20555	0.13	+0.0
4,629,650	-		PFLU_RS20555	0.13	+1.2
4,629,650	-		PFLU_RS20555	0.13	-0.2
4,629,650	-		PFLU_RS20555	0.13	+2.0
4,629,650	-		PFLU_RS20555	0.13	+0.7
4,629,650	-		PFLU_RS20555	0.13	-0.9
4,629,650	-		PFLU_RS20555	0.13	+0.0
4,629,650	-		PFLU_RS20555	0.13	-0.4
4,629,650	-		PFLU_RS20555	0.13	-0.0
4,629,650	-		PFLU_RS20555	0.13	-1.0
4,629,650	-		PFLU_RS20555	0.13	-0.6
4,629,650	-		PFLU_RS20555	0.13	+0.1
4,629,650	-		PFLU_RS20555	0.13	+0.0
4,629,650	-		PFLU_RS20555	0.13	-1.6
4,629,650	-		PFLU_RS20555	0.13	+0.6
4,629,650	-		PFLU_RS20555	0.13	+1.4
4,629,650	-		PFLU_RS20555	0.13	-0.9
4,629,650	-		PFLU_RS20555	0.13	-0.9
4,629,650	-		PFLU_RS20555	0.13	+1.2
4,629,650	-		PFLU_RS20555	0.13	-0.6
4,629,650	-		PFLU_RS20555	0.13	-0.3
4,629,650	-		PFLU_RS20555	0.13	-1.2
4,629,650	-		PFLU_RS20555	0.13	+0.0
4,629,650	-		PFLU_RS20555	0.13	+1.4
4,629,650	-		PFLU_RS20555	0.13	+1.6
4,629,692	-		PFLU_RS20555	0.17	+0.5
4,629,714	+		PFLU_RS20555	0.20	+0.9
4,629,714	+		PFLU_RS20555	0.20	-1.1
4,629,714	+		PFLU_RS20555	0.20	+0.0
4,629,714	+		PFLU_RS20555	0.20	-2.1
4,629,714	+		PFLU_RS20555	0.20	-0.2
4,629,714	+		PFLU_RS20555	0.20	-0.8
4,629,714	+		PFLU_RS20555	0.20	+2.0
4,629,714	+		PFLU_RS20555	0.20	+0.0
4,629,714	+		PFLU_RS20555	0.20	-1.6
4,629,715	-		PFLU_RS20555	0.20	+1.2
4,629,715	-		PFLU_RS20555	0.20	-0.9
4,629,715	-		PFLU_RS20555	0.20	+1.2
4,629,715	-		PFLU_RS20555	0.20	-1.2
4,629,715	-		PFLU_RS20555	0.20	+0.0
4,629,715	-		PFLU_RS20555	0.20	-1.1
4,629,715	-		PFLU_RS20555	0.20	+0.4
4,629,715	-		PFLU_RS20555	0.20	+0.2
4,629,715	-		PFLU_RS20555	0.20	+0.3
4,629,715	-		PFLU_RS20555	0.20	-1.7
4,629,715	-		PFLU_RS20555	0.20	+1.2
4,629,715	-		PFLU_RS20555	0.20	-0.6
4,629,715	-		PFLU_RS20555	0.20	+0.6
4,629,715	-		PFLU_RS20555	0.20	+1.3
4,629,716	+		PFLU_RS20555	0.20	-0.4
4,629,716	+		PFLU_RS20555	0.20	+1.6
4,629,716	+		PFLU_RS20555	0.20	-0.3
4,629,716	+		PFLU_RS20555	0.20	-1.6
4,629,717	-		PFLU_RS20555	0.20	+0.2
4,629,850	-		PFLU_RS20555	0.33	-0.0
4,629,850	-		PFLU_RS20555	0.33	-1.6
4,629,987	-		PFLU_RS20555	0.47	+1.0
4,629,987	-		PFLU_RS20555	0.47	-0.9
4,629,987	-		PFLU_RS20555	0.47	+0.7
4,629,987	-		PFLU_RS20555	0.47	+0.2
4,630,095	-		PFLU_RS20555	0.57	+0.5
4,630,331	+		PFLU_RS20555	0.81	+0.6
4,630,332	-		PFLU_RS20555	0.81	+0.8