Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS12480

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,792,914	+		PFLU_RS12475	0.75	-1.0
2,793,075	-		PFLU_RS12475	0.85	+1.8
2,793,220	-				-1.9
2,793,243	-				-1.7
2,793,243	-				-0.1
2,793,245	+				-0.4
2,793,245	+				+0.5
2,793,246	-				-1.5
2,793,246	-				-1.2
2,793,358	-				-1.3
2,793,752	+				-0.3
2,793,753	-				-0.0
2,793,753	-				-0.0
2,793,753	-				-0.2
2,793,753	-				-0.6
2,793,753	-				+0.1
2,793,765	-				-2.3
2,793,968	-				+0.9
2,794,064	+				-1.2
2,794,064	+				+2.0
2,794,064	+				-0.1
2,794,064	+				-1.7
2,794,065	-				+1.0
2,794,065	-				-0.0
2,794,065	-				-2.0
2,794,065	-				-3.1
2,794,130	+				+0.4
2,794,130	+				+0.8
2,794,131	-				-0.6
2,794,131	-				-1.9
2,794,237	-				-1.3
2,794,472	+				-0.4
2,794,472	+				-0.5
2,794,473	-				-0.2
2,794,473	-				-1.1
2,794,524	-				-0.3
2,794,524	-				+0.2
2,794,632	+				+2.0
2,794,632	+				+0.0
2,794,633	-				+0.6
2,794,633	-				-0.4
2,794,633	-				+0.9
2,794,888	-				+0.6
2,795,040	-				+0.9
2,795,127	-		PFLU_RS12480	0.11	+1.0
2,795,220	-		PFLU_RS12480	0.11	+1.9
2,795,450	+		PFLU_RS12480	0.13	+0.1
2,795,450	+		PFLU_RS12480	0.13	+1.0
2,795,598	-		PFLU_RS12480	0.14	+1.0
2,795,639	+		PFLU_RS12480	0.15	+0.3
2,795,677	-		PFLU_RS12480	0.15	+0.5
2,795,798	+		PFLU_RS12480	0.16	+0.3
2,795,798	+		PFLU_RS12480	0.16	+0.6
2,795,798	+		PFLU_RS12480	0.16	+0.1
2,795,798	+		PFLU_RS12480	0.16	-0.0
2,795,799	-		PFLU_RS12480	0.16	+0.5
2,795,799	-		PFLU_RS12480	0.16	-0.5
2,795,799	-		PFLU_RS12480	0.16	-0.9
2,796,029	+		PFLU_RS12480	0.18	-1.0
2,796,030	-		PFLU_RS12480	0.18	-0.5
2,796,230	+		PFLU_RS12480	0.19	-0.6
2,796,230	+		PFLU_RS12480	0.19	+0.5
2,796,230	+		PFLU_RS12480	0.19	+0.1
2,796,230	+		PFLU_RS12480	0.19	-0.4
2,796,231	-		PFLU_RS12480	0.19	-0.7
2,796,231	-		PFLU_RS12480	0.19	-0.5
2,796,231	-		PFLU_RS12480	0.19	+0.7
2,796,264	-		PFLU_RS12480	0.19	-2.1
2,796,341	+		PFLU_RS12480	0.20	-1.3
2,796,341	+		PFLU_RS12480	0.20	+0.2
2,796,341	+		PFLU_RS12480	0.20	+0.8
2,796,341	+		PFLU_RS12480	0.20	+0.4
2,796,341	+		PFLU_RS12480	0.20	-0.9
2,796,341	+		PFLU_RS12480	0.20	+1.1
2,796,342	-		PFLU_RS12480	0.20	-0.2
2,796,342	-		PFLU_RS12480	0.20	-0.8
2,796,342	-		PFLU_RS12480	0.20	-0.6
2,796,342	-		PFLU_RS12480	0.20	+0.2
2,796,342	-		PFLU_RS12480	0.20	+0.6
2,796,342	-		PFLU_RS12480	0.20	-0.8
2,796,342	-		PFLU_RS12480	0.20	-0.2
2,796,342	-		PFLU_RS12480	0.20	-0.2
2,796,342	-		PFLU_RS12480	0.20	-1.7
2,796,395	+		PFLU_RS12480	0.20	+0.3
2,796,395	+		PFLU_RS12480	0.20	-0.0
2,796,395	+		PFLU_RS12480	0.20	+1.3
2,796,395	+		PFLU_RS12480	0.20	+0.3
2,796,396	-		PFLU_RS12480	0.20	-1.0
2,796,396	-		PFLU_RS12480	0.20	+0.5
2,796,487	+		PFLU_RS12480	0.21	-0.4
2,796,487	+		PFLU_RS12480	0.21	+1.2
2,796,487	+		PFLU_RS12480	0.21	-1.7
2,796,487	+		PFLU_RS12480	0.21	+0.6
2,796,487	+		PFLU_RS12480	0.21	-1.1
2,796,488	-		PFLU_RS12480	0.21	-1.0
2,796,488	-		PFLU_RS12480	0.21	+0.6
2,796,488	-		PFLU_RS12480	0.21	-0.3
2,796,488	-		PFLU_RS12480	0.21	-0.5
2,796,488	-		PFLU_RS12480	0.21	+0.4
2,796,488	-		PFLU_RS12480	0.21	-0.0
2,796,488	-		PFLU_RS12480	0.21	-2.0
2,796,491	+		PFLU_RS12480	0.21	-1.4
2,796,491	+		PFLU_RS12480	0.21	-0.0
2,796,491	+		PFLU_RS12480	0.21	-0.6
2,796,491	+		PFLU_RS12480	0.21	-0.8
2,796,491	+		PFLU_RS12480	0.21	+0.4
2,796,491	+		PFLU_RS12480	0.21	+2.8
2,796,492	-		PFLU_RS12480	0.21	-1.0
2,796,492	-		PFLU_RS12480	0.21	+0.0
2,796,492	-		PFLU_RS12480	0.21	-1.0
2,796,689	+		PFLU_RS12480	0.23	-2.0
2,796,690	-		PFLU_RS12480	0.23	-2.2
2,797,107	+		PFLU_RS12480	0.26	+0.2
2,797,108	-		PFLU_RS12480	0.26	+0.9
2,797,108	-		PFLU_RS12480	0.26	-1.0
2,797,108	-		PFLU_RS12480	0.26	-0.6
2,797,247	+		PFLU_RS12480	0.27	+0.1
2,797,313	+		PFLU_RS12480	0.28	-2.6
2,797,314	-		PFLU_RS12480	0.28	+0.4
2,797,314	-		PFLU_RS12480	0.28	-0.8
2,797,367	-		PFLU_RS12480	0.28	-0.4
2,797,578	-		PFLU_RS12480	0.30	+0.2
2,797,625	-		PFLU_RS12480	0.30	+0.5
2,797,701	+		PFLU_RS12480	0.31	+0.9
2,797,727	+		PFLU_RS12480	0.31	-0.2
2,797,727	+		PFLU_RS12480	0.31	+0.0
2,797,727	+		PFLU_RS12480	0.31	+0.6
2,797,727	+		PFLU_RS12480	0.31	-0.6
2,797,727	+		PFLU_RS12480	0.31	+2.1
2,797,728	-		PFLU_RS12480	0.31	+0.5
2,797,728	-		PFLU_RS12480	0.31	-0.9
2,797,728	-		PFLU_RS12480	0.31	-0.1
2,797,728	-		PFLU_RS12480	0.31	-1.9
2,797,728	-		PFLU_RS12480	0.31	-2.4
2,798,113	-		PFLU_RS12480	0.34	-0.8
2,798,243	+		PFLU_RS12480	0.35	+0.5
2,798,244	-		PFLU_RS12480	0.35	-1.0
2,798,334	-		PFLU_RS12480	0.35	-0.8
2,798,334	-		PFLU_RS12480	0.35	-2.3
2,798,426	+		PFLU_RS12480	0.36	-1.1
2,798,427	-		PFLU_RS12480	0.36	+1.0
2,798,427	-		PFLU_RS12480	0.36	-2.6
2,798,804	+		PFLU_RS12480	0.39	-1.8
2,798,804	+		PFLU_RS12480	0.39	-0.2
2,798,804	+		PFLU_RS12480	0.39	+0.6
2,798,804	+		PFLU_RS12480	0.39	+1.0
2,798,804	+		PFLU_RS12480	0.39	+0.1
2,798,804	+		PFLU_RS12480	0.39	-0.5
2,798,804	+		PFLU_RS12480	0.39	-0.5
2,798,804	+		PFLU_RS12480	0.39	-0.8
2,798,804	+		PFLU_RS12480	0.39	-1.0
2,798,804	+		PFLU_RS12480	0.39	-0.8
2,798,804	+		PFLU_RS12480	0.39	-2.0
2,798,804	+		PFLU_RS12480	0.39	-1.1
2,798,804	+		PFLU_RS12480	0.39	+0.5
2,798,805	-		PFLU_RS12480	0.39	-0.0
2,798,805	-		PFLU_RS12480	0.39	+0.1
2,798,805	-		PFLU_RS12480	0.39	+0.6
2,798,805	-		PFLU_RS12480	0.39	-0.2
2,798,805	-		PFLU_RS12480	0.39	+0.0
2,798,805	-		PFLU_RS12480	0.39	-0.3
2,798,805	-		PFLU_RS12480	0.39	-2.2
2,798,809	-		PFLU_RS12480	0.39	+0.3
2,798,892	+		PFLU_RS12480	0.40	-0.4
2,798,960	+		PFLU_RS12480	0.40	-1.0
2,798,961	-		PFLU_RS12480	0.40	-2.0
2,798,961	-		PFLU_RS12480	0.40	-0.3
2,798,961	-		PFLU_RS12480	0.40	-0.5
2,798,969	+		PFLU_RS12480	0.40	+0.5
2,798,969	+		PFLU_RS12480	0.40	+1.4
2,798,969	+		PFLU_RS12480	0.40	+0.7
2,798,970	-		PFLU_RS12480	0.40	-1.8
2,798,970	-		PFLU_RS12480	0.40	+0.6
2,799,299	+		PFLU_RS12480	0.43	+0.2
2,799,488	+		PFLU_RS12480	0.44	-0.5
2,799,488	+		PFLU_RS12480	0.44	-1.6
2,799,488	+		PFLU_RS12480	0.44	+0.3
2,799,488	+		PFLU_RS12480	0.44	+0.4
2,799,488	+		PFLU_RS12480	0.44	-0.3
2,799,488	+		PFLU_RS12480	0.44	-0.9
2,799,489	-		PFLU_RS12480	0.44	-0.7
2,799,489	-		PFLU_RS12480	0.44	+1.8
2,799,542	+		PFLU_RS12480	0.45	+0.3
2,799,542	+		PFLU_RS12480	0.45	-0.0
2,799,542	+		PFLU_RS12480	0.45	-0.2
2,799,542	+		PFLU_RS12480	0.45	-0.2
2,799,543	-		PFLU_RS12480	0.45	+0.7
2,799,543	-		PFLU_RS12480	0.45	-0.9
2,799,543	-		PFLU_RS12480	0.45	-0.4
2,799,638	+		PFLU_RS12480	0.46	+0.2
2,799,686	+		PFLU_RS12480	0.46	-0.6
2,799,687	-		PFLU_RS12480	0.46	-0.6
2,799,837	-		PFLU_RS12480	0.47	+0.7
2,799,837	-		PFLU_RS12480	0.47	+0.1
2,799,839	+		PFLU_RS12480	0.47	+0.6
2,799,839	+		PFLU_RS12480	0.47	-0.1
2,799,839	+		PFLU_RS12480	0.47	+0.4
2,799,840	-		PFLU_RS12480	0.47	+0.4
2,799,840	-		PFLU_RS12480	0.47	-0.4
2,799,905	+		PFLU_RS12480	0.48	-1.3
2,799,905	+		PFLU_RS12480	0.48	-0.7
2,799,905	+		PFLU_RS12480	0.48	+1.1
2,799,905	+		PFLU_RS12480	0.48	+0.3
2,799,905	+		PFLU_RS12480	0.48	-0.9
2,799,906	-		PFLU_RS12480	0.48	-0.4
2,799,906	-		PFLU_RS12480	0.48	+1.6
2,799,906	-		PFLU_RS12480	0.48	+1.1
2,799,906	-		PFLU_RS12480	0.48	-2.0
2,799,923	+		PFLU_RS12480	0.48	-0.6
2,799,923	+		PFLU_RS12480	0.48	+1.4
2,799,924	-		PFLU_RS12480	0.48	-0.0
2,800,009	-		PFLU_RS12480	0.49	-0.8
2,800,042	-		PFLU_RS12480	0.49	+0.3
2,800,349	-		PFLU_RS12480	0.51	-0.7
2,800,349	-		PFLU_RS12480	0.51	-1.0
2,800,394	+		PFLU_RS12480	0.52	-0.5
2,800,394	+		PFLU_RS12480	0.52	-1.4
2,800,395	-		PFLU_RS12480	0.52	+1.0
2,800,395	-		PFLU_RS12480	0.52	+0.6
2,800,558	+		PFLU_RS12480	0.53	-3.4
2,800,742	+		PFLU_RS12480	0.54	+0.0
2,800,742	+		PFLU_RS12480	0.54	+0.2
2,800,742	+		PFLU_RS12480	0.54	-0.6
2,800,742	+		PFLU_RS12480	0.54	-0.4
2,800,742	+		PFLU_RS12480	0.54	-0.6
2,800,742	+		PFLU_RS12480	0.54	-0.7
2,800,742	+		PFLU_RS12480	0.54	-0.3
2,800,742	+		PFLU_RS12480	0.54	-0.2
2,800,743	-		PFLU_RS12480	0.54	-1.7
2,800,743	-		PFLU_RS12480	0.54	-0.8
2,800,898	+		PFLU_RS12480	0.55	+0.6
2,800,898	+		PFLU_RS12480	0.55	-1.9
2,800,898	+		PFLU_RS12480	0.55	-0.0
2,800,899	-		PFLU_RS12480	0.55	-0.0
2,800,899	-		PFLU_RS12480	0.55	-0.5
2,800,899	-		PFLU_RS12480	0.55	-0.2
2,801,407	+		PFLU_RS12480	0.59	+0.6
2,801,407	+		PFLU_RS12480	0.59	-0.5
2,801,407	+		PFLU_RS12480	0.59	-0.2
2,801,407	+		PFLU_RS12480	0.59	-1.2
2,801,408	-		PFLU_RS12480	0.59	+0.1
2,801,408	-		PFLU_RS12480	0.59	+0.2
2,801,408	-		PFLU_RS12480	0.59	+1.6
2,801,412	-		PFLU_RS12480	0.59	+0.3
2,801,825	+		PFLU_RS12480	0.63	-0.0
2,801,825	+		PFLU_RS12480	0.63	+1.4
2,801,826	-		PFLU_RS12480	0.63	-0.2
2,801,826	-		PFLU_RS12480	0.63	-1.0
2,801,826	-		PFLU_RS12480	0.63	+0.3
2,801,826	-		PFLU_RS12480	0.63	+0.3
2,801,826	-		PFLU_RS12480	0.63	-0.5
2,801,883	+		PFLU_RS12480	0.63	+0.6
2,801,972	+		PFLU_RS12480	0.64	+0.0
2,802,093	+		PFLU_RS12480	0.65	-0.8
2,802,094	-		PFLU_RS12480	0.65	-0.6
2,802,182	+		PFLU_RS12480	0.65	-0.9
2,802,182	+		PFLU_RS12480	0.65	-2.9
2,802,182	+		PFLU_RS12480	0.65	-2.9
2,802,182	+		PFLU_RS12480	0.65	-0.2
2,802,182	+		PFLU_RS12480	0.65	-0.2
2,802,182	+		PFLU_RS12480	0.65	+0.1
2,802,183	-		PFLU_RS12480	0.65	-2.4
2,802,183	-		PFLU_RS12480	0.65	+0.6
2,802,183	-		PFLU_RS12480	0.65	-0.6
2,802,183	-		PFLU_RS12480	0.65	+1.7
2,802,505	+		PFLU_RS12480	0.68	-0.7
2,802,506	-		PFLU_RS12480	0.68	+1.4
2,802,584	+		PFLU_RS12480	0.69	+0.0
2,802,584	+		PFLU_RS12480	0.69	-0.4
2,802,584	+		PFLU_RS12480	0.69	-0.9
2,802,585	-		PFLU_RS12480	0.69	+1.3
2,802,585	-		PFLU_RS12480	0.69	+0.0
2,802,585	-		PFLU_RS12480	0.69	-0.1
2,802,585	-		PFLU_RS12480	0.69	+0.4
2,802,680	+		PFLU_RS12480	0.69	-0.7
2,802,734	+		PFLU_RS12480	0.70	-0.1
2,802,734	+		PFLU_RS12480	0.70	-1.1
2,802,735	-		PFLU_RS12480	0.70	-0.9
2,802,735	-		PFLU_RS12480	0.70	-0.1
2,802,735	-		PFLU_RS12480	0.70	+0.1
2,802,735	-		PFLU_RS12480	0.70	-0.7
2,802,830	+		PFLU_RS12480	0.70	+0.3
2,802,830	+		PFLU_RS12480	0.70	-0.4
2,802,831	-		PFLU_RS12480	0.70	-0.4
2,802,889	+		PFLU_RS12480	0.71	-1.2
2,802,919	-		PFLU_RS12480	0.71	+0.6
2,802,984	+		PFLU_RS12480	0.72	-0.2
2,803,100	+		PFLU_RS12480	0.73	-1.2
2,803,194	+		PFLU_RS12480	0.73	-0.4
2,803,195	-		PFLU_RS12480	0.73	-2.7
2,803,196	+		PFLU_RS12480	0.73	-0.8
2,803,197	-		PFLU_RS12480	0.73	+0.9
2,803,197	-		PFLU_RS12480	0.73	+1.4
2,803,474	+		PFLU_RS12480	0.75	-0.3
2,803,475	-		PFLU_RS12480	0.75	+0.8
2,803,540	-		PFLU_RS12480	0.76	-3.0
2,803,571	+		PFLU_RS12480	0.76	-0.0
2,803,572	-		PFLU_RS12480	0.76	+0.2
2,803,572	-		PFLU_RS12480	0.76	-2.4
2,803,605	-		PFLU_RS12480	0.76	+0.8
2,803,610	+		PFLU_RS12480	0.77	-0.5
2,803,610	+		PFLU_RS12480	0.77	-0.3
2,803,610	+		PFLU_RS12480	0.77	-0.9
2,803,610	+		PFLU_RS12480	0.77	+2.0
2,803,610	+		PFLU_RS12480	0.77	+0.6
2,803,610	+		PFLU_RS12480	0.77	-1.3
2,803,611	-		PFLU_RS12480	0.77	+0.5
2,803,611	-		PFLU_RS12480	0.77	+0.4
2,803,611	-		PFLU_RS12480	0.77	+1.0
2,803,611	-		PFLU_RS12480	0.77	-0.2
2,803,637	+		PFLU_RS12480	0.77	-0.0
2,803,638	-		PFLU_RS12480	0.77	+0.3
2,803,830	+		PFLU_RS12480	0.78	-2.2
2,803,831	-		PFLU_RS12480	0.78	-1.4
2,803,831	-		PFLU_RS12480	0.78	+1.3
2,803,831	-		PFLU_RS12480	0.78	+0.3
2,803,910	+		PFLU_RS12480	0.79	+0.6
2,803,910	+		PFLU_RS12480	0.79	+0.0
2,803,911	-		PFLU_RS12480	0.79	+0.7
2,803,911	-		PFLU_RS12480	0.79	+0.2
2,803,955	+		PFLU_RS12480	0.79	-0.0
2,803,955	+		PFLU_RS12480	0.79	+0.1
2,804,066	+		PFLU_RS12480	0.80	-0.0
2,804,066	+		PFLU_RS12480	0.80	+0.1
2,804,067	-		PFLU_RS12480	0.80	-0.8
2,804,067	-		PFLU_RS12480	0.80	-0.0
2,804,353	-		PFLU_RS12480	0.82	-0.8
2,804,407	+		PFLU_RS12480	0.83	+0.3
2,804,408	-		PFLU_RS12480	0.83	+0.1
2,804,408	-		PFLU_RS12480	0.83	-0.0
2,804,408	-		PFLU_RS12480	0.83	+0.7
2,804,578	+		PFLU_RS12480	0.84	+0.7
2,804,578	+		PFLU_RS12480	0.84	-0.3
2,804,579	-		PFLU_RS12480	0.84	-0.6
2,804,579	-		PFLU_RS12480	0.84	+1.5
2,804,582	+		PFLU_RS12480	0.84	+1.4
2,804,665	+		PFLU_RS12480	0.85	-0.0
2,804,665	+		PFLU_RS12480	0.85	+1.5
2,804,666	-		PFLU_RS12480	0.85	-0.9
2,804,666	-		PFLU_RS12480	0.85	-0.1
2,804,666	-		PFLU_RS12480	0.85	-0.2
2,804,673	-		PFLU_RS12480	0.85	-0.4
2,804,895	-		PFLU_RS12480	0.87	+0.1
2,804,991	-		PFLU_RS12480	0.87	-0.5
2,805,137	+		PFLU_RS12480	0.88	-2.5
2,805,138	-		PFLU_RS12480	0.88	+1.0
2,805,179	+		PFLU_RS12480	0.89	-0.9
2,805,180	-		PFLU_RS12480	0.89	-3.0
2,805,338	+		PFLU_RS12480	0.90	+0.6
2,805,348	-				-0.1
2,805,348	-				-0.7
2,805,348	-				+0.2
2,805,348	-				+1.0
2,805,572	+				+0.0
2,805,572	+				+1.0
2,805,573	-				+0.0
2,805,639	+				+1.7
2,805,639	+				+0.2
2,805,639	+				-1.0
2,805,640	-				+1.0
2,805,640	-				-1.2
2,805,640	-				-1.2
2,805,762	-				+0.3
2,805,770	+				-0.6
2,805,771	-				-0.2
2,805,875	+				-0.0
2,805,875	+				-0.0
2,805,875	+				+0.6
2,805,875	+				+0.1
2,805,875	+				+0.1
2,805,875	+				-0.5
2,805,875	+				-1.7
2,805,875	+				-0.3
2,805,875	+				-0.6
2,805,876	-				+0.0
2,805,876	-				+0.8
2,805,876	-				-1.2
2,805,876	-				-0.1
2,805,876	-				-0.5
2,805,876	-				-0.0
2,805,876	-				+0.4
2,805,880	-				+1.6
2,805,880	-				-0.7
2,805,880	-				-0.5
2,805,880	-				-0.1
2,805,960	-				-1.7
2,806,074	-				-1.4
2,806,211	+				+0.6
2,806,212	-				+0.1
2,806,257	+				-0.8
2,806,257	+				+0.4
2,806,258	-				+0.0
2,806,276	+				+0.2
2,806,276	+				-0.4
2,806,381	-				-1.4
2,807,029	+				+1.0
2,807,269	+				-1.0
2,807,365	-				+0.6
2,807,365	-				+1.1
2,807,417	-				-1.0
2,807,467	+				-0.8
2,807,467	+				-0.4
2,807,468	-				-0.6
2,807,468	-				-0.0
2,807,607	-				+0.1