Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS11185

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,471,257	+		PFLU_RS11180	0.16	+1.0
2,471,258	-		PFLU_RS11180	0.16	+0.2
2,471,258	-		PFLU_RS11180	0.16	-1.5
2,471,281	+		PFLU_RS11180	0.19	-2.7
2,471,311	+		PFLU_RS11180	0.23	-0.8
2,471,312	-		PFLU_RS11180	0.23	+0.8
2,471,326	+		PFLU_RS11180	0.25	+1.1
2,471,326	+		PFLU_RS11180	0.25	+0.2
2,471,326	+		PFLU_RS11180	0.25	+1.0
2,471,326	+		PFLU_RS11180	0.25	-1.0
2,471,326	+		PFLU_RS11180	0.25	-1.9
2,471,326	+		PFLU_RS11180	0.25	+1.7
2,471,326	+		PFLU_RS11180	0.25	+0.5
2,471,327	-		PFLU_RS11180	0.25	+0.1
2,471,327	-		PFLU_RS11180	0.25	-2.3
2,471,327	-		PFLU_RS11180	0.25	-0.5
2,471,327	-		PFLU_RS11180	0.25	-0.6
2,471,327	-		PFLU_RS11180	0.25	-0.4
2,471,327	-		PFLU_RS11180	0.25	-0.1
2,471,327	-		PFLU_RS11180	0.25	+2.2
2,471,332	+		PFLU_RS11180	0.26	-0.7
2,471,332	+		PFLU_RS11180	0.26	+0.2
2,471,332	+		PFLU_RS11180	0.26	-2.8
2,471,332	+		PFLU_RS11180	0.26	+2.8
2,471,332	+		PFLU_RS11180	0.26	+0.0
2,471,332	+		PFLU_RS11180	0.26	-0.6
2,471,332	+		PFLU_RS11180	0.26	+0.2
2,471,332	+		PFLU_RS11180	0.26	-0.4
2,471,332	+		PFLU_RS11180	0.26	+0.7
2,471,332	+		PFLU_RS11180	0.26	-0.1
2,471,333	-		PFLU_RS11180	0.26	+0.8
2,471,333	-		PFLU_RS11180	0.26	+0.1
2,471,333	-		PFLU_RS11180	0.26	-0.8
2,471,333	-		PFLU_RS11180	0.26	+0.2
2,471,333	-		PFLU_RS11180	0.26	+0.2
2,471,333	-		PFLU_RS11180	0.26	+0.6
2,471,333	-		PFLU_RS11180	0.26	+0.2
2,471,339	-		PFLU_RS11180	0.27	+1.0
2,471,488	+		PFLU_RS11180	0.48	+0.1
2,471,509	+		PFLU_RS11180	0.51	-0.8
2,471,509	+		PFLU_RS11180	0.51	+0.1
2,471,509	+		PFLU_RS11180	0.51	-0.2
2,471,509	+		PFLU_RS11180	0.51	-0.8
2,471,510	-		PFLU_RS11180	0.51	+1.1
2,471,510	-		PFLU_RS11180	0.51	+1.0
2,471,510	-		PFLU_RS11180	0.51	-2.1
2,471,510	-		PFLU_RS11180	0.51	+0.4
2,471,510	-		PFLU_RS11180	0.51	-0.1
2,471,515	+		PFLU_RS11180	0.51	-0.4
2,471,515	+		PFLU_RS11180	0.51	+0.9
2,471,515	+		PFLU_RS11180	0.51	+0.7
2,471,516	-		PFLU_RS11180	0.52	-0.8
2,471,516	-		PFLU_RS11180	0.52	+1.8
2,471,516	-		PFLU_RS11180	0.52	+0.1
2,471,516	-		PFLU_RS11180	0.52	+0.5
2,471,516	-		PFLU_RS11180	0.52	-0.0
2,471,516	-		PFLU_RS11180	0.52	+0.9
2,471,533	+		PFLU_RS11180	0.54	-0.6
2,471,533	+		PFLU_RS11180	0.54	+0.1
2,471,533	+		PFLU_RS11180	0.54	+0.6
2,471,533	+		PFLU_RS11180	0.54	+0.6
2,471,533	+		PFLU_RS11180	0.54	-1.2
2,471,533	+		PFLU_RS11180	0.54	-0.0
2,471,534	-		PFLU_RS11180	0.54	+0.2
2,471,534	-		PFLU_RS11180	0.54	+0.6
2,471,534	-		PFLU_RS11180	0.54	+0.4
2,471,534	-		PFLU_RS11180	0.54	+2.6
2,471,534	-		PFLU_RS11180	0.54	+0.4
2,471,534	-		PFLU_RS11180	0.54	-1.5
2,471,534	-		PFLU_RS11180	0.54	-0.0
2,471,534	-		PFLU_RS11180	0.54	+1.4
2,471,534	-		PFLU_RS11180	0.54	+0.7
2,471,534	-		PFLU_RS11180	0.54	+0.4
2,471,534	-		PFLU_RS11180	0.54	-0.0
2,471,602	+		PFLU_RS11180	0.63	-2.2
2,471,602	+		PFLU_RS11180	0.63	+0.0
2,471,602	+		PFLU_RS11180	0.63	+0.2
2,471,602	+		PFLU_RS11180	0.63	-0.1
2,471,602	+		PFLU_RS11180	0.63	-0.5
2,471,603	-		PFLU_RS11180	0.63	+2.0
2,471,603	-		PFLU_RS11180	0.63	-0.2
2,471,603	-		PFLU_RS11180	0.63	-0.3
2,471,603	-		PFLU_RS11180	0.63	-0.1
2,471,608	+		PFLU_RS11180	0.64	-0.3
2,471,608	+		PFLU_RS11180	0.64	-0.3
2,471,608	+		PFLU_RS11180	0.64	+0.1
2,471,608	+		PFLU_RS11180	0.64	-1.2
2,471,608	+		PFLU_RS11180	0.64	+0.4
2,471,608	+		PFLU_RS11180	0.64	+0.5
2,471,608	+		PFLU_RS11180	0.64	-0.3
2,471,609	-		PFLU_RS11180	0.64	-1.1
2,471,609	-		PFLU_RS11180	0.64	+0.5
2,471,609	-		PFLU_RS11180	0.64	+0.6
2,471,651	-		PFLU_RS11180	0.70	+0.9
2,471,782	+		PFLU_RS11180	0.88	-0.9
2,471,783	-		PFLU_RS11180	0.88	+0.8
2,471,868	-				+0.8
2,471,881	-				-0.2
2,472,043	+				+0.2
2,472,044	-				+0.8
2,472,044	-				+0.7
2,472,044	-				+0.4
2,472,044	-				+0.6
2,472,101	-				-0.3
2,472,195	+				-0.1
2,472,223	+				-0.8
2,472,223	+				+0.6
2,472,224	-				-1.5
2,472,224	-				-0.9
2,472,392	+		PFLU_RS11185	0.15	+0.2
2,472,392	+		PFLU_RS11185	0.15	+0.5
2,472,392	+		PFLU_RS11185	0.15	+2.2
2,472,392	+		PFLU_RS11185	0.15	+1.1
2,472,392	+		PFLU_RS11185	0.15	-0.1
2,472,392	+		PFLU_RS11185	0.15	-1.0
2,472,614	+		PFLU_RS11185	0.35	-2.1
2,472,707	+		PFLU_RS11185	0.43	+1.0
2,472,707	+		PFLU_RS11185	0.43	+0.7
2,472,707	+		PFLU_RS11185	0.43	-0.3
2,472,708	-		PFLU_RS11185	0.43	+0.9
2,472,709	+		PFLU_RS11185	0.43	-1.3
2,472,709	+		PFLU_RS11185	0.43	+0.8
2,472,709	+		PFLU_RS11185	0.43	+0.5
2,472,709	+		PFLU_RS11185	0.43	-0.2
2,472,710	-		PFLU_RS11185	0.43	-0.3
2,472,710	-		PFLU_RS11185	0.43	+1.2
2,472,710	-		PFLU_RS11185	0.43	-0.4
2,472,710	-		PFLU_RS11185	0.43	+0.9
2,472,845	+		PFLU_RS11185	0.55	+0.6
2,472,846	-		PFLU_RS11185	0.55	+1.6
2,472,866	+		PFLU_RS11185	0.56	-1.7
2,472,866	+		PFLU_RS11185	0.56	+0.4
2,472,866	+		PFLU_RS11185	0.56	+0.6
2,472,866	+		PFLU_RS11185	0.56	-0.6
2,472,866	+		PFLU_RS11185	0.56	+0.2
2,472,866	+		PFLU_RS11185	0.56	+0.7
2,472,867	-		PFLU_RS11185	0.56	+0.7
2,472,867	-		PFLU_RS11185	0.56	+0.2
2,472,867	-		PFLU_RS11185	0.56	-1.7
2,472,868	+		PFLU_RS11185	0.57	+0.6
2,472,869	-		PFLU_RS11185	0.57	+0.1
2,472,941	+		PFLU_RS11185	0.63	+0.0
2,472,942	-		PFLU_RS11185	0.63	+1.2
2,472,942	-		PFLU_RS11185	0.63	-0.8
2,472,942	-		PFLU_RS11185	0.63	-0.8
2,473,196	+		PFLU_RS11185	0.85	+0.7
2,473,196	+		PFLU_RS11185	0.85	-0.2
2,473,197	-		PFLU_RS11185	0.85	-0.1
2,473,221	-		PFLU_RS11185	0.87	-1.5
2,473,240	-		PFLU_RS11185	0.89	-0.0
2,473,416	-				-0.4
2,473,416	-				-0.8
2,473,417	+				+0.2
2,473,417	+				-0.8
2,473,417	+				-2.1
2,473,417	+				+0.5
2,473,418	-				-0.0
2,473,418	-				+0.8
2,473,418	-				+1.1
2,473,421	+				+0.1
2,473,421	+				+0.6
2,473,423	+				+1.1
2,473,424	-				+0.2
2,473,437	+				-0.1
2,473,437	+				-0.3
2,473,438	-				+1.0
2,473,440	+				-1.7
2,473,441	-				-1.5
2,473,441	-				+0.8
2,473,627	+		PFLU_RS11190	0.12	-0.1
2,473,728	+		PFLU_RS11190	0.18	-0.2
2,473,846	+		PFLU_RS11190	0.25	+1.8
2,473,876	+		PFLU_RS11190	0.27	-0.0
2,473,877	-		PFLU_RS11190	0.27	-0.3
2,473,877	-		PFLU_RS11190	0.27	-2.1
2,473,948	-		PFLU_RS11190	0.31	+1.0
2,473,948	-		PFLU_RS11190	0.31	+2.5
2,474,276	+		PFLU_RS11190	0.52	-0.3
2,474,276	+		PFLU_RS11190	0.52	+1.3
2,474,309	-		PFLU_RS11190	0.54	-0.3
2,474,309	-		PFLU_RS11190	0.54	+0.4
2,474,309	-		PFLU_RS11190	0.54	-1.3
2,474,311	+		PFLU_RS11190	0.54	+0.3