Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10925

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
2,409,155	-				+0.5
2,409,189	+				+0.0
2,409,190	-				+0.0
2,409,385	+		PFLU_RS10920	0.22	-0.6
2,409,385	+		PFLU_RS10920	0.22	-0.1
2,409,386	-		PFLU_RS10920	0.22	-0.1
2,409,386	-		PFLU_RS10920	0.22	-0.0
2,409,386	-		PFLU_RS10920	0.22	+0.8
2,409,386	-		PFLU_RS10920	0.22	+1.3
2,409,387	+		PFLU_RS10920	0.22	+0.2
2,409,387	+		PFLU_RS10920	0.22	-0.0
2,409,387	+		PFLU_RS10920	0.22	+0.1
2,409,387	+		PFLU_RS10920	0.22	+2.1
2,409,388	-		PFLU_RS10920	0.22	-0.1
2,409,388	-		PFLU_RS10920	0.22	+2.9
2,409,388	-		PFLU_RS10920	0.22	+1.8
2,409,388	-		PFLU_RS10920	0.22	+1.0
2,409,388	-		PFLU_RS10920	0.22	+0.4
2,409,388	-		PFLU_RS10920	0.22	+0.2
2,409,505	+		PFLU_RS10920	0.34	-0.4
2,409,505	+		PFLU_RS10920	0.34	-0.7
2,409,505	+		PFLU_RS10920	0.34	+1.1
2,409,505	+		PFLU_RS10920	0.34	-1.3
2,409,506	-		PFLU_RS10920	0.34	+0.5
2,409,532	+		PFLU_RS10920	0.37	+0.4
2,409,532	+		PFLU_RS10920	0.37	-0.5
2,409,532	+		PFLU_RS10920	0.37	-0.0
2,409,532	+		PFLU_RS10920	0.37	-0.5
2,409,532	+		PFLU_RS10920	0.37	-1.0
2,409,532	+		PFLU_RS10920	0.37	+2.4
2,409,533	-		PFLU_RS10920	0.37	-0.4
2,409,533	-		PFLU_RS10920	0.37	+0.3
2,409,609	+		PFLU_RS10920	0.44	+0.6
2,409,783	+		PFLU_RS10920	0.62	+0.1
2,409,783	+		PFLU_RS10920	0.62	+0.1
2,409,783	+		PFLU_RS10920	0.62	+0.6
2,409,783	+		PFLU_RS10920	0.62	-0.9
2,409,783	+		PFLU_RS10920	0.62	+0.4
2,409,783	+		PFLU_RS10920	0.62	-1.6
2,409,783	+		PFLU_RS10920	0.62	+0.1
2,409,783	+		PFLU_RS10920	0.62	+0.1
2,409,783	+		PFLU_RS10920	0.62	-0.4
2,409,783	+		PFLU_RS10920	0.62	+0.5
2,409,784	-		PFLU_RS10920	0.62	-0.9
2,409,784	-		PFLU_RS10920	0.62	+0.2
2,409,784	-		PFLU_RS10920	0.62	+1.3
2,409,784	-		PFLU_RS10920	0.62	-0.3
2,409,784	-		PFLU_RS10920	0.62	-1.7
2,409,784	-		PFLU_RS10920	0.62	-1.1
2,409,784	-		PFLU_RS10920	0.62	+0.9
2,409,785	+		PFLU_RS10920	0.62	-1.3
2,409,831	+		PFLU_RS10920	0.67	+1.6
2,409,831	+		PFLU_RS10920	0.67	+0.0
2,409,831	+		PFLU_RS10920	0.67	-0.1
2,409,831	+		PFLU_RS10920	0.67	-0.0
2,409,832	-		PFLU_RS10920	0.67	+0.1
2,409,835	+		PFLU_RS10920	0.68	+0.3
2,409,836	-		PFLU_RS10920	0.68	+0.6
2,409,861	+		PFLU_RS10920	0.70	-1.4
2,409,862	-		PFLU_RS10920	0.70	-0.3
2,409,879	+		PFLU_RS10920	0.72	-1.5
2,409,879	+		PFLU_RS10920	0.72	-0.1
2,409,880	-		PFLU_RS10920	0.72	+0.2
2,409,883	+		PFLU_RS10920	0.72	+0.9
2,409,883	+		PFLU_RS10920	0.72	-1.0
2,409,883	+		PFLU_RS10920	0.72	+0.0
2,409,883	+		PFLU_RS10920	0.72	-0.7
2,409,883	+		PFLU_RS10920	0.72	-1.4
2,409,883	+		PFLU_RS10920	0.72	-0.5
2,409,883	+		PFLU_RS10920	0.72	-1.2
2,409,883	+		PFLU_RS10920	0.72	-0.5
2,409,883	+		PFLU_RS10920	0.72	-0.3
2,409,883	+		PFLU_RS10920	0.72	-2.3
2,409,883	+		PFLU_RS10920	0.72	+1.6
2,409,883	+		PFLU_RS10920	0.72	-0.2
2,409,883	+		PFLU_RS10920	0.72	+0.8
2,409,883	+		PFLU_RS10920	0.72	+0.4
2,409,883	+		PFLU_RS10920	0.72	+0.4
2,409,883	+		PFLU_RS10920	0.72	-0.7
2,409,883	+		PFLU_RS10920	0.72	-0.1
2,409,884	-		PFLU_RS10920	0.73	-0.5
2,409,884	-		PFLU_RS10920	0.73	-0.1
2,409,884	-		PFLU_RS10920	0.73	-0.7
2,409,884	-		PFLU_RS10920	0.73	+0.7
2,409,884	-		PFLU_RS10920	0.73	-0.7
2,409,884	-		PFLU_RS10920	0.73	+0.0
2,409,884	-		PFLU_RS10920	0.73	-0.0
2,409,884	-		PFLU_RS10920	0.73	+0.5
2,409,884	-		PFLU_RS10920	0.73	-0.6
2,409,884	-		PFLU_RS10920	0.73	-0.7
2,409,884	-		PFLU_RS10920	0.73	-0.9
2,409,884	-		PFLU_RS10920	0.73	+1.3
2,409,884	-		PFLU_RS10920	0.73	+0.1
2,409,978	+		PFLU_RS10920	0.82	-0.3
2,409,979	-		PFLU_RS10920	0.82	-0.4
2,409,979	-		PFLU_RS10920	0.82	-0.9
2,410,008	+		PFLU_RS10920	0.85	+0.5
2,410,008	+		PFLU_RS10920	0.85	-0.3
2,410,008	+		PFLU_RS10920	0.85	+0.6
2,410,008	+		PFLU_RS10920	0.85	-1.5
2,410,008	+		PFLU_RS10920	0.85	+0.3
2,410,008	+		PFLU_RS10920	0.85	-0.3
2,410,008	+		PFLU_RS10920	0.85	-0.1
2,410,009	-		PFLU_RS10920	0.85	+0.3
2,410,009	-		PFLU_RS10920	0.85	-1.3
2,410,009	-		PFLU_RS10920	0.85	-0.5
2,410,009	-		PFLU_RS10920	0.85	+1.1
2,410,009	-		PFLU_RS10920	0.85	+1.1
2,410,032	+		PFLU_RS10920	0.88	-1.0
2,410,127	+				+0.4
2,410,127	+				+0.3
2,410,128	-				-0.8
2,410,171	+				+1.5
2,410,171	+				+0.3
2,410,218	+				+1.6
2,410,227	+				-0.1
2,410,256	-		PFLU_RS10925	0.13	-0.4
2,410,256	-		PFLU_RS10925	0.13	-0.5
2,410,365	-		PFLU_RS10925	0.26	-2.0
2,410,518	+		PFLU_RS10925	0.44	+1.0
2,410,518	+		PFLU_RS10925	0.44	-0.2
2,410,518	+		PFLU_RS10925	0.44	+0.3
2,410,519	-		PFLU_RS10925	0.44	-0.1
2,410,519	-		PFLU_RS10925	0.44	+0.3
2,410,519	-		PFLU_RS10925	0.44	-0.7
2,410,519	-		PFLU_RS10925	0.44	-0.1
2,410,833	-		PFLU_RS10925	0.82	-0.1
2,410,833	-		PFLU_RS10925	0.82	-0.2
2,410,974	+				-0.2
2,411,044	+				+0.4
2,411,045	-				+1.1
2,411,045	-				+0.5
2,411,045	-				+0.0
2,411,081	+				-0.1
2,411,081	+				-0.1
2,411,081	+				+0.0
2,411,081	+				-0.3
2,411,082	-				+1.9
2,411,082	-				-0.4
2,411,082	-				-1.2
2,411,082	-				-1.1
2,411,088	-				+0.7
2,411,088	-				-1.6
2,411,088	-				+0.1
2,411,244	+		PFLU_RS10930	0.16	-0.6
2,411,245	-		PFLU_RS10930	0.16	-2.5
2,411,245	-		PFLU_RS10930	0.16	+0.4
2,411,245	-		PFLU_RS10930	0.16	+0.8
2,411,245	-		PFLU_RS10930	0.16	+1.1
2,411,246	+		PFLU_RS10930	0.16	-0.5
2,411,246	+		PFLU_RS10930	0.16	-0.9
2,411,246	+		PFLU_RS10930	0.16	-0.6
2,411,246	+		PFLU_RS10930	0.16	-0.3
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+2.0
2,411,246	+		PFLU_RS10930	0.16	+1.4
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+1.1
2,411,246	+		PFLU_RS10930	0.16	-0.6
2,411,246	+		PFLU_RS10930	0.16	+0.0
2,411,246	+		PFLU_RS10930	0.16	+0.1
2,411,246	+		PFLU_RS10930	0.16	+0.8
2,411,246	+		PFLU_RS10930	0.16	+1.3
2,411,246	+		PFLU_RS10930	0.16	-0.4
2,411,246	+		PFLU_RS10930	0.16	+1.1
2,411,246	+		PFLU_RS10930	0.16	-1.4
2,411,246	+		PFLU_RS10930	0.16	-0.8
2,411,246	+		PFLU_RS10930	0.16	+1.5
2,411,246	+		PFLU_RS10930	0.16	+0.8
2,411,246	+		PFLU_RS10930	0.16	-1.5
2,411,246	+		PFLU_RS10930	0.16	-1.5
2,411,246	+		PFLU_RS10930	0.16	-2.2
2,411,247	-		PFLU_RS10930	0.17	-0.3
2,411,247	-		PFLU_RS10930	0.17	+1.3
2,411,247	-		PFLU_RS10930	0.17	-1.3
2,411,247	-		PFLU_RS10930	0.17	+0.9
2,411,247	-		PFLU_RS10930	0.17	+1.4
2,411,247	-		PFLU_RS10930	0.17	-0.3
2,411,247	-		PFLU_RS10930	0.17	-0.5
2,411,247	-		PFLU_RS10930	0.17	+0.7
2,411,247	-		PFLU_RS10930	0.17	+0.7
2,411,247	-		PFLU_RS10930	0.17	-0.0
2,411,247	-		PFLU_RS10930	0.17	-0.8
2,411,247	-		PFLU_RS10930	0.17	-0.3
2,411,247	-		PFLU_RS10930	0.17	-2.1
2,411,247	-		PFLU_RS10930	0.17	-0.5
2,411,247	-		PFLU_RS10930	0.17	-0.4
2,411,247	-		PFLU_RS10930	0.17	+0.8
2,411,247	-		PFLU_RS10930	0.17	-0.9
2,411,247	-		PFLU_RS10930	0.17	+1.0
2,411,247	-		PFLU_RS10930	0.17	+0.1
2,411,383	+		PFLU_RS10930	0.25	+2.1
2,411,383	+		PFLU_RS10930	0.25	-0.9
2,411,383	+		PFLU_RS10930	0.25	-0.7
2,411,383	+		PFLU_RS10930	0.25	+0.8
2,411,383	+		PFLU_RS10930	0.25	-0.1
2,411,422	+		PFLU_RS10930	0.27	-1.0
2,411,562	-		PFLU_RS10930	0.36	+0.0
2,411,720	-		PFLU_RS10930	0.45	+0.6
2,411,814	+		PFLU_RS10930	0.51	-0.5
2,411,969	+		PFLU_RS10930	0.60	-0.2
2,411,969	+		PFLU_RS10930	0.60	-0.4
2,411,970	-		PFLU_RS10930	0.60	-0.6
2,411,970	-		PFLU_RS10930	0.60	-0.6