Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08400

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,875,143	+				-0.9
1,875,143	+				-2.2
1,875,143	+				-1.4
1,875,143	+				-1.2
1,875,143	+				-0.8
1,875,144	-				+0.9
1,875,144	-				-1.0
1,875,144	-				+1.0
1,875,144	-				+0.3
1,875,255	+		PFLU_RS08395	0.13	-2.3
1,875,255	+		PFLU_RS08395	0.13	-0.3
1,875,255	+		PFLU_RS08395	0.13	-0.0
1,875,256	-		PFLU_RS08395	0.13	+1.1
1,875,333	+		PFLU_RS08395	0.21	-0.7
1,875,334	-		PFLU_RS08395	0.21	+0.8
1,875,334	-		PFLU_RS08395	0.21	+2.3
1,875,452	-		PFLU_RS08395	0.33	-0.1
1,875,452	-		PFLU_RS08395	0.33	-0.4
1,875,452	-		PFLU_RS08395	0.33	-0.4
1,875,534	+		PFLU_RS08395	0.42	-0.9
1,875,534	+		PFLU_RS08395	0.42	-1.6
1,875,534	+		PFLU_RS08395	0.42	+0.3
1,875,535	-		PFLU_RS08395	0.42	-1.8
1,875,535	-		PFLU_RS08395	0.42	-0.1
1,875,535	-		PFLU_RS08395	0.42	-0.0
1,875,535	-		PFLU_RS08395	0.42	-0.7
1,875,753	+		PFLU_RS08395	0.64	+1.0
1,875,754	-		PFLU_RS08395	0.65	+1.0
1,875,772	+		PFLU_RS08395	0.66	-1.2
1,875,772	+		PFLU_RS08395	0.66	-0.1
1,875,891	+		PFLU_RS08395	0.79	+0.4
1,875,891	+		PFLU_RS08395	0.79	+0.7
1,875,933	+		PFLU_RS08395	0.83	+0.4
1,875,933	+		PFLU_RS08395	0.83	+0.5
1,875,934	-		PFLU_RS08395	0.83	+0.3
1,875,934	-		PFLU_RS08395	0.83	+0.1
1,875,934	-		PFLU_RS08395	0.83	-1.6
1,875,934	-		PFLU_RS08395	0.83	-0.4
1,875,948	+		PFLU_RS08395	0.85	-0.5
1,875,948	+		PFLU_RS08395	0.85	-0.5
1,875,948	+		PFLU_RS08395	0.85	-0.5
1,875,948	+		PFLU_RS08395	0.85	+0.5
1,875,948	+		PFLU_RS08395	0.85	-0.6
1,875,948	+		PFLU_RS08395	0.85	-0.5
1,875,948	+		PFLU_RS08395	0.85	+0.4
1,875,948	+		PFLU_RS08395	0.85	-0.9
1,875,949	-		PFLU_RS08395	0.85	+0.6
1,875,949	-		PFLU_RS08395	0.85	+0.1
1,875,949	-		PFLU_RS08395	0.85	+0.6
1,875,949	-		PFLU_RS08395	0.85	-1.5
1,875,966	-		PFLU_RS08395	0.87	+0.8
1,875,966	-		PFLU_RS08395	0.87	-0.4
1,875,966	-		PFLU_RS08395	0.87	-1.3
1,875,966	-		PFLU_RS08395	0.87	+0.7
1,875,966	-		PFLU_RS08395	0.87	-0.2
1,875,993	+		PFLU_RS08395	0.89	+0.1
1,875,993	+		PFLU_RS08395	0.89	-1.3
1,875,993	+		PFLU_RS08395	0.89	+0.6
1,875,994	-		PFLU_RS08395	0.90	+0.3
1,875,994	-		PFLU_RS08395	0.90	+0.5
1,875,994	-		PFLU_RS08395	0.90	+0.9
1,876,057	-				+0.6
1,876,073	+				-0.1
1,876,191	+				+0.3
1,876,192	-				+1.3
1,876,215	+		PFLU_RS08400	0.12	-0.5
1,876,224	+		PFLU_RS08400	0.13	-0.4
1,876,333	+		PFLU_RS08400	0.25	+0.4
1,876,334	-		PFLU_RS08400	0.25	+0.4
1,876,334	-		PFLU_RS08400	0.25	+0.1
1,876,382	+		PFLU_RS08400	0.30	-0.9
1,876,382	+		PFLU_RS08400	0.30	+2.3
1,876,382	+		PFLU_RS08400	0.30	+0.8
1,876,382	+		PFLU_RS08400	0.30	-1.1
1,876,383	-		PFLU_RS08400	0.30	+0.7
1,876,383	-		PFLU_RS08400	0.30	+0.9
1,876,383	-		PFLU_RS08400	0.30	+0.0
1,876,392	+		PFLU_RS08400	0.31	+0.0
1,876,392	+		PFLU_RS08400	0.31	+1.4
1,876,393	-		PFLU_RS08400	0.31	+1.6
1,876,404	-		PFLU_RS08400	0.32	-0.3
1,876,423	+		PFLU_RS08400	0.35	+1.2
1,876,433	+		PFLU_RS08400	0.36	+0.4
1,876,433	+		PFLU_RS08400	0.36	+1.0
1,876,433	+		PFLU_RS08400	0.36	+0.4
1,876,433	+		PFLU_RS08400	0.36	-1.0
1,876,434	-		PFLU_RS08400	0.36	+0.5
1,876,446	+		PFLU_RS08400	0.37	+0.7
1,876,446	+		PFLU_RS08400	0.37	+1.6
1,876,446	+		PFLU_RS08400	0.37	+0.1
1,876,447	-		PFLU_RS08400	0.37	+0.9
1,876,447	-		PFLU_RS08400	0.37	+1.8
1,876,447	-		PFLU_RS08400	0.37	-0.1
1,876,447	-		PFLU_RS08400	0.37	+1.5
1,876,447	-		PFLU_RS08400	0.37	+0.9
1,876,447	-		PFLU_RS08400	0.37	+0.0
1,876,498	+		PFLU_RS08400	0.43	+0.6
1,876,498	+		PFLU_RS08400	0.43	-0.1
1,876,498	+		PFLU_RS08400	0.43	-0.7
1,876,498	+		PFLU_RS08400	0.43	+0.5
1,876,498	+		PFLU_RS08400	0.43	+0.7
1,876,498	+		PFLU_RS08400	0.43	+1.2
1,876,498	+		PFLU_RS08400	0.43	+1.0
1,876,498	+		PFLU_RS08400	0.43	+0.5
1,876,498	+		PFLU_RS08400	0.43	+1.2
1,876,498	+		PFLU_RS08400	0.43	-0.8
1,876,498	+		PFLU_RS08400	0.43	+0.3
1,876,498	+		PFLU_RS08400	0.43	+1.5
1,876,498	+		PFLU_RS08400	0.43	+0.1
1,876,498	+		PFLU_RS08400	0.43	+0.5
1,876,498	+		PFLU_RS08400	0.43	+1.5
1,876,498	+		PFLU_RS08400	0.43	+0.6
1,876,498	+		PFLU_RS08400	0.43	+0.7
1,876,499	-		PFLU_RS08400	0.43	+1.0
1,876,499	-		PFLU_RS08400	0.43	+0.9
1,876,499	-		PFLU_RS08400	0.43	+0.1
1,876,499	-		PFLU_RS08400	0.43	-0.1
1,876,499	-		PFLU_RS08400	0.43	+1.0
1,876,499	-		PFLU_RS08400	0.43	+0.1
1,876,499	-		PFLU_RS08400	0.43	+1.2
1,876,499	-		PFLU_RS08400	0.43	-0.1
1,876,499	-		PFLU_RS08400	0.43	+0.9
1,876,499	-		PFLU_RS08400	0.43	+1.5
1,876,499	-		PFLU_RS08400	0.43	+0.9
1,876,499	-		PFLU_RS08400	0.43	+0.1
1,876,499	-		PFLU_RS08400	0.43	+0.3
1,876,632	+		PFLU_RS08400	0.58	-0.1
1,876,632	+		PFLU_RS08400	0.58	-1.1
1,876,632	+		PFLU_RS08400	0.58	+1.5
1,876,633	-		PFLU_RS08400	0.58	+1.7
1,876,844	+		PFLU_RS08400	0.81	+0.8
1,876,844	+		PFLU_RS08400	0.81	+1.3
1,876,844	+		PFLU_RS08400	0.81	+1.0
1,876,844	+		PFLU_RS08400	0.81	+0.6
1,876,844	+		PFLU_RS08400	0.81	+0.5
1,876,845	-		PFLU_RS08400	0.81	+1.3
1,876,846	+		PFLU_RS08400	0.81	+0.7
1,876,846	+		PFLU_RS08400	0.81	+1.1
1,876,846	+		PFLU_RS08400	0.81	+1.1
1,876,846	+		PFLU_RS08400	0.81	+0.5
1,876,846	+		PFLU_RS08400	0.81	+0.9
1,876,846	+		PFLU_RS08400	0.81	-0.9
1,876,846	+		PFLU_RS08400	0.81	+2.0
1,876,846	+		PFLU_RS08400	0.81	+0.2
1,876,846	+		PFLU_RS08400	0.81	+0.5
1,876,846	+		PFLU_RS08400	0.81	+0.5
1,876,846	+		PFLU_RS08400	0.81	+0.6
1,876,846	+		PFLU_RS08400	0.81	+0.4
1,876,846	+		PFLU_RS08400	0.81	+1.3
1,876,846	+		PFLU_RS08400	0.81	+1.6
1,876,846	+		PFLU_RS08400	0.81	+2.2
1,876,846	+		PFLU_RS08400	0.81	+0.8
1,876,846	+		PFLU_RS08400	0.81	-0.3
1,876,846	+		PFLU_RS08400	0.81	+0.7
1,876,846	+		PFLU_RS08400	0.81	+0.3
1,876,846	+		PFLU_RS08400	0.81	-1.1
1,876,846	+		PFLU_RS08400	0.81	-0.5
1,876,846	+		PFLU_RS08400	0.81	-0.7
1,876,847	-		PFLU_RS08400	0.81	+0.1
1,876,847	-		PFLU_RS08400	0.81	+0.6
1,876,847	-		PFLU_RS08400	0.81	+0.5
1,876,847	-		PFLU_RS08400	0.81	-0.6
1,876,847	-		PFLU_RS08400	0.81	-0.1
1,876,847	-		PFLU_RS08400	0.81	+1.3
1,876,847	-		PFLU_RS08400	0.81	+0.6
1,876,847	-		PFLU_RS08400	0.81	+1.0
1,876,847	-		PFLU_RS08400	0.81	-0.5
1,876,847	-		PFLU_RS08400	0.81	+0.2
1,876,847	-		PFLU_RS08400	0.81	+1.6
1,876,847	-		PFLU_RS08400	0.81	+1.7
1,876,847	-		PFLU_RS08400	0.81	+0.2
1,876,847	-		PFLU_RS08400	0.81	-0.2
1,876,847	-		PFLU_RS08400	0.81	+0.8
1,876,847	-		PFLU_RS08400	0.81	-0.5
1,876,847	-		PFLU_RS08400	0.81	+0.3
1,876,847	-		PFLU_RS08400	0.81	+1.3
1,876,981	+				-0.0
1,876,981	+				+1.6
1,876,981	+				-0.1
1,876,981	+				-0.7
1,876,981	+				-0.2
1,876,982	-				-0.3
1,876,982	-				+1.7
1,876,982	-				+1.8
1,876,982	-				-0.0
1,876,997	+				-0.3
1,876,998	-				-0.4
1,877,013	+				-1.1
1,877,014	-				+0.8
1,877,014	-				+0.2
1,877,014	-				+0.3
1,877,014	-				+1.0
1,877,043	-				+0.8
1,877,043	-				+3.5
1,877,043	-				-0.3
1,877,085	+				+0.4
1,877,085	+				+0.5
1,877,085	+				+0.5
1,877,085	+				+0.3
1,877,085	+				+0.9
1,877,085	+				-0.9
1,877,085	+				+1.1
1,877,085	+				-0.4
1,877,085	+				+1.3
1,877,085	+				-0.6
1,877,085	+				+0.3
1,877,086	-				+0.7
1,877,086	-				-0.5
1,877,086	-				+0.4
1,877,086	-				+0.3
1,877,086	-				+1.2
1,877,104	+				-0.7
1,877,104	+				-2.4
1,877,104	+				-0.1
1,877,105	-				+0.4
1,877,125	+				-0.4
1,877,125	+				+1.3
1,877,126	-				+1.1
1,877,134	+				+0.2
1,877,134	+				+1.5
1,877,134	+				-0.4
1,877,134	+				+1.8
1,877,134	+				+0.6
1,877,135	-				+0.1
1,877,135	-				+1.6
1,877,135	-				+0.0
1,877,185	+		PFLU_RS08405	0.20	-0.9
1,877,185	+		PFLU_RS08405	0.20	+0.4
1,877,185	+		PFLU_RS08405	0.20	+0.6
1,877,185	+		PFLU_RS08405	0.20	-0.4
1,877,185	+		PFLU_RS08405	0.20	+0.1
1,877,185	+		PFLU_RS08405	0.20	-1.1
1,877,185	+		PFLU_RS08405	0.20	+0.6
1,877,185	+		PFLU_RS08405	0.20	+1.4
1,877,186	-		PFLU_RS08405	0.20	-0.6
1,877,186	-		PFLU_RS08405	0.20	+0.9
1,877,186	-		PFLU_RS08405	0.20	-2.8
1,877,186	-		PFLU_RS08405	0.20	-0.4
1,877,186	-		PFLU_RS08405	0.20	-0.9
1,877,242	+		PFLU_RS08405	0.31	-1.3
1,877,242	+		PFLU_RS08405	0.31	+0.1
1,877,242	+		PFLU_RS08405	0.31	+0.1
1,877,243	-		PFLU_RS08405	0.31	+0.7
1,877,243	-		PFLU_RS08405	0.31	+0.0
1,877,243	-		PFLU_RS08405	0.31	-1.3
1,877,243	-		PFLU_RS08405	0.31	+0.9
1,877,243	-		PFLU_RS08405	0.31	+1.0
1,877,243	-		PFLU_RS08405	0.31	+1.0
1,877,243	-		PFLU_RS08405	0.31	-1.7
1,877,243	-		PFLU_RS08405	0.31	-1.0
1,877,414	+		PFLU_RS08405	0.65	+0.4
1,877,414	+		PFLU_RS08405	0.65	+1.1
1,877,414	+		PFLU_RS08405	0.65	+0.2
1,877,414	+		PFLU_RS08405	0.65	+0.1
1,877,430	+		PFLU_RS08405	0.69	-0.6
1,877,430	+		PFLU_RS08405	0.69	-1.3
1,877,457	-		PFLU_RS08405	0.74	+0.7
1,877,466	+		PFLU_RS08405	0.76	-1.3
1,877,466	+		PFLU_RS08405	0.76	+0.3
1,877,466	+		PFLU_RS08405	0.76	-0.5
1,877,466	+		PFLU_RS08405	0.76	-0.5
1,877,467	-		PFLU_RS08405	0.76	-0.7
1,877,467	-		PFLU_RS08405	0.76	+0.6
1,877,487	+		PFLU_RS08405	0.80	-1.0
1,877,529	+		PFLU_RS08405	0.88	+0.3
1,877,529	+		PFLU_RS08405	0.88	-0.7
1,877,530	-		PFLU_RS08405	0.89	-0.7
1,877,530	-		PFLU_RS08405	0.89	+2.3
1,877,636	+				+0.8
1,877,636	+				+1.2
1,877,640	+				-1.4
1,877,640	+				+0.7
1,877,641	-				-0.9
1,877,641	-				-0.4
1,877,641	-				-1.4
1,877,642	+				+0.4
1,877,643	-				-1.2
1,877,657	-				-2.1
1,877,669	+				-0.1
1,877,670	-				-1.5
1,877,689	+				-2.8
1,877,689	+				-3.4
1,877,689	+				-1.0
1,877,689	+				-2.1
1,877,689	+				-3.6
1,877,689	+				-1.3
1,877,689	+				-0.9
1,877,689	+				-2.0
1,877,689	+				+0.1
1,877,689	+				-0.8
1,877,689	+				-0.5
1,877,689	+				-2.2
1,877,689	+				-1.2
1,877,689	+				-3.1
1,877,689	+				-0.3
1,877,689	+				-2.3
1,877,689	+				-0.9
1,877,689	+				-1.9
1,877,689	+				-0.9
1,877,689	+				-2.8
1,877,689	+				-0.9
1,877,689	+				-0.3
1,877,689	+				-2.5
1,877,689	+				-1.7
1,877,689	+				-2.0
1,877,689	+				-0.1
1,877,689	+				-1.9
1,877,689	+				-1.4
1,877,689	+				-2.5
1,877,689	+				-1.5
1,877,689	+				-3.3
1,877,689	+				-3.3
1,877,689	+				-1.5
1,877,689	+				-1.5
1,877,690	-				-1.3
1,877,690	-				-0.9
1,877,690	-				-0.5
1,877,690	-				-1.1
1,877,690	-				+0.5
1,877,690	-				-0.5
1,877,690	-				-2.1
1,877,690	-				-0.5
1,877,690	-				-1.7
1,877,690	-				+0.5
1,877,690	-				-0.8
1,877,690	-				+0.5
1,877,690	-				-2.1
1,877,690	-				-1.5
1,877,690	-				+0.2
1,877,690	-				-0.9
1,877,690	-				-1.5
1,877,690	-				-1.3
1,877,690	-				-1.3
1,877,690	-				-1.9
1,877,690	-				-2.1
1,877,690	-				-1.0
1,877,690	-				-1.7
1,877,690	-				-0.8
1,877,690	-				-1.7
1,877,690	-				-0.9
1,877,690	-				-1.1
1,877,690	-				-0.9
1,877,690	-				+0.2
1,877,690	-				-1.1
1,877,690	-				+0.5
1,877,690	-				-1.9
1,877,690	-				-1.3
1,877,690	-				-0.5
1,877,690	-				-1.1
1,877,690	-				-0.5
1,877,690	-				-2.0
1,877,690	-				-1.9
1,877,711	+				-1.7
1,877,711	+				-2.6
1,877,711	+				-0.1
1,877,712	-				-1.9
1,877,712	-				+0.0
1,877,712	-				-1.1
1,877,768	+				-1.0
1,877,768	+				-2.0
1,877,769	-				-0.7
1,877,769	-				-0.8
1,877,769	-				-0.9
1,877,769	-				-2.1