Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS08185

Experiment: Trisodium citrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Trisodium citrate (C)
1,828,803	-		PFLU_RS08180	0.13	-1.4
1,828,910	+		PFLU_RS08180	0.23	+1.3
1,828,915	+		PFLU_RS08180	0.24	-2.6
1,828,915	+		PFLU_RS08180	0.24	-1.6
1,828,916	-		PFLU_RS08180	0.24	+0.5
1,828,916	-		PFLU_RS08180	0.24	+1.2
1,828,916	-		PFLU_RS08180	0.24	+1.5
1,828,916	-		PFLU_RS08180	0.24	-0.0
1,828,935	+		PFLU_RS08180	0.26	-1.3
1,828,936	-		PFLU_RS08180	0.26	+1.7
1,828,958	+		PFLU_RS08180	0.28	-1.7
1,828,958	+		PFLU_RS08180	0.28	-3.0
1,828,959	-		PFLU_RS08180	0.28	+2.7
1,829,031	-		PFLU_RS08180	0.35	+1.7
1,829,051	+		PFLU_RS08180	0.37	-2.5
1,829,052	-		PFLU_RS08180	0.37	+2.5
1,829,059	+		PFLU_RS08180	0.38	-2.4
1,829,119	-		PFLU_RS08180	0.44	+0.9
1,829,119	-		PFLU_RS08180	0.44	+0.6
1,829,179	+		PFLU_RS08180	0.50	-1.3
1,829,349	-		PFLU_RS08180	0.66	+0.9
1,829,357	+		PFLU_RS08180	0.67	-0.1
1,829,563	+		PFLU_RS08180	0.87	+0.2
1,829,659	-				+0.9
1,829,694	+				-3.4
1,829,751	-				+1.5
1,829,816	+				+0.9
1,829,819	+				+0.4
1,829,915	+		PFLU_RS08185	0.15	+1.3
1,829,915	+		PFLU_RS08185	0.15	+1.2
1,829,916	-		PFLU_RS08185	0.15	-0.1
1,829,933	-		PFLU_RS08185	0.16	+0.9
1,829,933	-		PFLU_RS08185	0.16	+3.7
1,829,978	+		PFLU_RS08185	0.20	-0.0
1,829,995	+		PFLU_RS08185	0.22	+0.2
1,830,016	+		PFLU_RS08185	0.23	+1.2
1,830,016	+		PFLU_RS08185	0.23	+2.4
1,830,017	-		PFLU_RS08185	0.24	+0.1
1,830,035	+		PFLU_RS08185	0.25	+1.8
1,830,037	+		PFLU_RS08185	0.25	+2.3
1,830,073	+		PFLU_RS08185	0.28	+2.3
1,830,073	+		PFLU_RS08185	0.28	+0.6
1,830,074	-		PFLU_RS08185	0.28	+3.5
1,830,110	+		PFLU_RS08185	0.31	+1.5
1,830,110	+		PFLU_RS08185	0.31	+1.1
1,830,192	-		PFLU_RS08185	0.38	-0.8
1,830,227	+		PFLU_RS08185	0.41	+0.9
1,830,231	+		PFLU_RS08185	0.42	+1.4
1,830,231	+		PFLU_RS08185	0.42	+1.5
1,830,231	+		PFLU_RS08185	0.42	+0.2
1,830,231	+		PFLU_RS08185	0.42	+1.7
1,830,231	+		PFLU_RS08185	0.42	+1.9
1,830,231	+		PFLU_RS08185	0.42	+1.7
1,830,231	+		PFLU_RS08185	0.42	+1.7
1,830,231	+		PFLU_RS08185	0.42	+0.3
1,830,231	+		PFLU_RS08185	0.42	+0.1
1,830,231	+		PFLU_RS08185	0.42	+0.9
1,830,231	+		PFLU_RS08185	0.42	+1.5
1,830,231	+		PFLU_RS08185	0.42	-1.3
1,830,231	+		PFLU_RS08185	0.42	+1.7
1,830,232	-		PFLU_RS08185	0.42	+2.5
1,830,232	-		PFLU_RS08185	0.42	+0.8
1,830,232	-		PFLU_RS08185	0.42	+1.5
1,830,232	-		PFLU_RS08185	0.42	-0.8
1,830,232	-		PFLU_RS08185	0.42	+1.5
1,830,232	-		PFLU_RS08185	0.42	+0.7
1,830,232	-		PFLU_RS08185	0.42	+1.8
1,830,232	-		PFLU_RS08185	0.42	+2.1
1,830,232	-		PFLU_RS08185	0.42	+3.1
1,830,232	-		PFLU_RS08185	0.42	+1.9
1,830,232	-		PFLU_RS08185	0.42	-0.5
1,830,232	-		PFLU_RS08185	0.42	+2.4
1,830,248	-		PFLU_RS08185	0.43	+0.5
1,830,290	+		PFLU_RS08185	0.47	+2.5
1,830,290	+		PFLU_RS08185	0.47	-1.8
1,830,290	+		PFLU_RS08185	0.47	+0.7
1,830,291	-		PFLU_RS08185	0.47	+1.7
1,830,291	-		PFLU_RS08185	0.47	+1.2
1,830,291	-		PFLU_RS08185	0.47	-1.3
1,830,366	+		PFLU_RS08185	0.53	+2.5
1,830,366	+		PFLU_RS08185	0.53	+2.7
1,830,366	+		PFLU_RS08185	0.53	+0.7
1,830,366	+		PFLU_RS08185	0.53	-2.0
1,830,367	-		PFLU_RS08185	0.53	+1.6
1,830,367	-		PFLU_RS08185	0.53	-0.5
1,830,367	-		PFLU_RS08185	0.53	+1.3
1,830,367	-		PFLU_RS08185	0.53	+2.1
1,830,367	-		PFLU_RS08185	0.53	+0.7
1,830,367	-		PFLU_RS08185	0.53	+1.3
1,830,367	-		PFLU_RS08185	0.53	-0.1
1,830,369	-		PFLU_RS08185	0.53	+0.2
1,830,369	-		PFLU_RS08185	0.53	+1.1
1,830,369	-		PFLU_RS08185	0.53	+1.6
1,830,399	+		PFLU_RS08185	0.56	+1.7
1,830,400	-		PFLU_RS08185	0.56	+0.7
1,830,400	-		PFLU_RS08185	0.56	+2.3
1,830,400	-		PFLU_RS08185	0.56	-0.1
1,830,484	+		PFLU_RS08185	0.63	+0.2
1,830,524	-		PFLU_RS08185	0.67	+2.0
1,830,524	-		PFLU_RS08185	0.67	-0.1
1,830,600	-		PFLU_RS08185	0.73	-0.3
1,830,600	-		PFLU_RS08185	0.73	+1.5
1,830,621	+		PFLU_RS08185	0.75	-0.5
1,830,624	-		PFLU_RS08185	0.75	+2.5
1,830,624	-		PFLU_RS08185	0.75	+0.9
1,830,624	-		PFLU_RS08185	0.75	+1.6
1,830,656	-		PFLU_RS08185	0.78	+2.1
1,830,696	-		PFLU_RS08185	0.81	+1.5
1,830,765	-		PFLU_RS08185	0.87	+0.5
1,830,863	-				-1.5
1,830,923	+				+0.1
1,830,927	+				-0.4
1,831,000	-				-0.9
1,831,001	+				+1.5
1,831,189	-				+2.5
1,831,255	+				-0.6
1,831,255	+				+0.2
1,831,255	+				+0.4
1,831,255	+				-2.3
1,831,256	-				-0.8
1,831,256	-				-0.5
1,831,256	-				+0.6
1,831,256	-				-0.8
1,831,256	-				-2.8
1,831,256	-				-0.9
1,831,256	-				-0.1
1,831,256	-				+1.0
1,831,256	-				-0.7
1,831,371	+				-0.8
1,831,371	+				+0.8
1,831,371	+				-0.7
1,831,371	+				+0.4
1,831,371	+				+0.6
1,831,372	-				-1.7
1,831,372	-				-1.0
1,831,372	-				-0.0
1,831,372	-				-1.1
1,831,375	+				+0.2
1,831,375	+				-1.9
1,831,375	+				-1.3
1,831,375	+				-0.7
1,831,375	+				-0.0
1,831,375	+				+0.6
1,831,375	+				+0.7
1,831,375	+				+0.1
1,831,376	-				-1.7
1,831,376	-				-0.8
1,831,376	-				+0.1
1,831,376	-				+0.5
1,831,376	-				+0.5
1,831,376	-				+0.1
1,831,376	-				-0.7
1,831,376	-				-0.8
1,831,448	-				-0.0
1,831,526	+		PFLU_RS08190	0.11	-0.8
1,831,526	+		PFLU_RS08190	0.11	-0.7
1,831,526	+		PFLU_RS08190	0.11	-0.1
1,831,527	-		PFLU_RS08190	0.11	-0.5
1,831,527	-		PFLU_RS08190	0.11	+0.1
1,831,527	-		PFLU_RS08190	0.11	-0.5
1,831,537	+		PFLU_RS08190	0.11	-0.1
1,831,537	+		PFLU_RS08190	0.11	-0.8
1,831,537	+		PFLU_RS08190	0.11	-0.1
1,831,538	-		PFLU_RS08190	0.11	+0.8
1,831,538	-		PFLU_RS08190	0.11	-0.5
1,831,544	+		PFLU_RS08190	0.12	+0.4
1,831,545	-		PFLU_RS08190	0.12	-2.0
1,831,603	-		PFLU_RS08190	0.15	+0.6
1,831,620	-		PFLU_RS08190	0.16	+0.2
1,831,620	-		PFLU_RS08190	0.16	+0.6
1,831,625	+		PFLU_RS08190	0.16	+0.0
1,831,625	+		PFLU_RS08190	0.16	-2.0
1,831,626	-		PFLU_RS08190	0.16	+0.4
1,831,644	+		PFLU_RS08190	0.17	+0.3
1,831,644	+		PFLU_RS08190	0.17	-2.3
1,831,644	+		PFLU_RS08190	0.17	-2.8
1,831,644	+		PFLU_RS08190	0.17	-0.6
1,831,644	+		PFLU_RS08190	0.17	+0.6
1,831,666	+		PFLU_RS08190	0.18	-0.9
1,831,666	+		PFLU_RS08190	0.18	-2.2
1,831,667	-		PFLU_RS08190	0.18	+0.7
1,831,667	-		PFLU_RS08190	0.18	-0.0
1,831,667	-		PFLU_RS08190	0.18	+0.0
1,831,670	+		PFLU_RS08190	0.18	+0.4
1,831,670	+		PFLU_RS08190	0.18	+0.5
1,831,670	+		PFLU_RS08190	0.18	-0.2
1,831,670	+		PFLU_RS08190	0.18	-0.1
1,831,671	-		PFLU_RS08190	0.18	+0.6
1,831,671	-		PFLU_RS08190	0.18	+0.5
1,831,671	-		PFLU_RS08190	0.18	+0.5
1,831,671	-		PFLU_RS08190	0.18	+0.5
1,831,671	-		PFLU_RS08190	0.18	-0.6
1,831,725	-		PFLU_RS08190	0.21	-0.4
1,831,732	-		PFLU_RS08190	0.21	+2.0
1,831,797	+		PFLU_RS08190	0.24	+0.6
1,831,797	+		PFLU_RS08190	0.24	-0.5
1,831,798	-		PFLU_RS08190	0.24	-0.4
1,831,805	+		PFLU_RS08190	0.25	+0.4
1,831,805	+		PFLU_RS08190	0.25	-0.8
1,831,805	+		PFLU_RS08190	0.25	-0.5
1,831,805	+		PFLU_RS08190	0.25	-0.2
1,831,805	+		PFLU_RS08190	0.25	-0.8
1,831,805	+		PFLU_RS08190	0.25	+0.9
1,831,805	+		PFLU_RS08190	0.25	-0.4
1,831,805	+		PFLU_RS08190	0.25	+0.0
1,831,805	+		PFLU_RS08190	0.25	+2.0
1,831,805	+		PFLU_RS08190	0.25	-2.5
1,831,805	+		PFLU_RS08190	0.25	-1.3
1,831,806	-		PFLU_RS08190	0.25	-0.2
1,831,806	-		PFLU_RS08190	0.25	-1.8
1,831,806	-		PFLU_RS08190	0.25	-2.4
1,831,806	-		PFLU_RS08190	0.25	+1.0
1,831,806	-		PFLU_RS08190	0.25	+0.4
1,831,806	-		PFLU_RS08190	0.25	-2.3
1,831,806	-		PFLU_RS08190	0.25	-0.8
1,831,806	-		PFLU_RS08190	0.25	-2.3