Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS29260 and ABID97_RS29265 are separated by 163 nucleotides ABID97_RS29265 and ABID97_RS29270 are separated by 287 nucleotides
ABID97_RS29260: ABID97_RS29260 - MFS transporter, at 774,256 to 775,449
_RS29260
ABID97_RS29265: ABID97_RS29265 - alkaline phosphatase D family protein, at 775,613 to 777,421
_RS29265
ABID97_RS29270: ABID97_RS29270 - cytochrome b561 domain-containing protein, at 777,709 to 778,485
_RS29270
Position (kb) 775
776
777
778 Strain fitness (log2 ratio) -1
0
1 at 774.889 kb on + strand, within ABID97_RS29260 at 774.917 kb on - strand, within ABID97_RS29260 at 774.917 kb on - strand, within ABID97_RS29260 at 774.917 kb on - strand, within ABID97_RS29260 at 774.917 kb on - strand, within ABID97_RS29260 at 775.318 kb on + strand, within ABID97_RS29260 at 775.318 kb on + strand, within ABID97_RS29260 at 776.061 kb on - strand, within ABID97_RS29265 at 776.105 kb on + strand, within ABID97_RS29265 at 776.106 kb on - strand, within ABID97_RS29265 at 776.111 kb on + strand, within ABID97_RS29265 at 776.294 kb on + strand, within ABID97_RS29265 at 776.294 kb on + strand, within ABID97_RS29265 at 776.295 kb on - strand, within ABID97_RS29265 at 776.300 kb on + strand, within ABID97_RS29265 at 776.300 kb on + strand, within ABID97_RS29265 at 776.300 kb on + strand, within ABID97_RS29265 at 776.301 kb on - strand, within ABID97_RS29265 at 776.301 kb on - strand, within ABID97_RS29265 at 776.301 kb on - strand, within ABID97_RS29265 at 776.547 kb on - strand, within ABID97_RS29265 at 776.547 kb on - strand, within ABID97_RS29265 at 776.633 kb on + strand, within ABID97_RS29265 at 776.666 kb on - strand, within ABID97_RS29265 at 776.666 kb on - strand, within ABID97_RS29265 at 776.724 kb on - strand, within ABID97_RS29265 at 776.987 kb on + strand, within ABID97_RS29265 at 776.987 kb on + strand, within ABID97_RS29265 at 776.988 kb on - strand, within ABID97_RS29265 at 776.988 kb on - strand, within ABID97_RS29265 at 777.317 kb on + strand at 777.663 kb on + strand at 778.370 kb on - strand, within ABID97_RS29270
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 774,889 + ABID97_RS29260 0.53 +0.4 774,917 - ABID97_RS29260 0.55 -0.1 774,917 - ABID97_RS29260 0.55 -0.8 774,917 - ABID97_RS29260 0.55 +1.3 774,917 - ABID97_RS29260 0.55 -0.2 775,318 + ABID97_RS29260 0.89 +0.7 775,318 + ABID97_RS29260 0.89 -0.4 776,061 - ABID97_RS29265 0.25 -0.4 776,105 + ABID97_RS29265 0.27 +0.4 776,106 - ABID97_RS29265 0.27 +0.3 776,111 + ABID97_RS29265 0.28 +0.6 776,294 + ABID97_RS29265 0.38 +0.4 776,294 + ABID97_RS29265 0.38 +0.7 776,295 - ABID97_RS29265 0.38 +1.3 776,300 + ABID97_RS29265 0.38 +0.6 776,300 + ABID97_RS29265 0.38 -0.2 776,300 + ABID97_RS29265 0.38 -0.2 776,301 - ABID97_RS29265 0.38 -0.5 776,301 - ABID97_RS29265 0.38 +0.2 776,301 - ABID97_RS29265 0.38 -0.0 776,547 - ABID97_RS29265 0.52 -1.0 776,547 - ABID97_RS29265 0.52 -0.3 776,633 + ABID97_RS29265 0.56 +0.5 776,666 - ABID97_RS29265 0.58 +0.3 776,666 - ABID97_RS29265 0.58 +0.2 776,724 - ABID97_RS29265 0.61 +0.5 776,987 + ABID97_RS29265 0.76 -0.5 776,987 + ABID97_RS29265 0.76 +0.1 776,988 - ABID97_RS29265 0.76 +0.4 776,988 - ABID97_RS29265 0.76 +0.0 777,317 + +0.3 777,663 + +0.1 778,370 - ABID97_RS29270 0.85 -0.4
Or see this region's nucleotide sequence