Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1585 and PfGW456L13_1586 are separated by 197 nucleotides PfGW456L13_1586 and PfGW456L13_1587 are separated by 145 nucleotides PfGW456L13_1587 and PfGW456L13_1588 are separated by 183 nucleotides
PfGW456L13_1584 - Molybdopterin biosynthesis protein MoeB, at 1,748,941 to 1,749,696
_1584
PfGW456L13_1585 - Glutamate racemase (EC 5.1.1.3), at 1,749,677 to 1,750,480
_1585
PfGW456L13_1586 - Lipid A 3-O-deacylase, at 1,750,678 to 1,751,121
_1586
PfGW456L13_1587 - FIG00955589: hypothetical protein, at 1,751,267 to 1,751,488
_1587
PfGW456L13_1588 - Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-), at 1,751,672 to 1,752,454
_1588
Position (kb) 1750
1751
1752 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.447 kb on + strand at 1750.448 kb on - strand at 1750.448 kb on - strand at 1750.448 kb on - strand at 1750.448 kb on - strand at 1750.478 kb on + strand at 1750.478 kb on + strand at 1750.478 kb on + strand at 1750.478 kb on + strand at 1750.478 kb on + strand at 1750.478 kb on + strand at 1750.479 kb on - strand at 1750.479 kb on - strand at 1750.525 kb on - strand at 1750.525 kb on - strand at 1750.539 kb on + strand at 1750.542 kb on - strand at 1750.573 kb on + strand at 1750.720 kb on + strand at 1750.721 kb on - strand at 1750.804 kb on + strand, within PfGW456L13_1586 at 1750.805 kb on - strand, within PfGW456L13_1586 at 1750.805 kb on - strand, within PfGW456L13_1586 at 1750.805 kb on - strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.806 kb on + strand, within PfGW456L13_1586 at 1750.807 kb on - strand at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.807 kb on - strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.810 kb on + strand, within PfGW456L13_1586 at 1750.811 kb on - strand, within PfGW456L13_1586 at 1750.811 kb on - strand, within PfGW456L13_1586 at 1750.811 kb on - strand, within PfGW456L13_1586 at 1750.870 kb on + strand, within PfGW456L13_1586 at 1750.871 kb on - strand, within PfGW456L13_1586 at 1750.900 kb on + strand, within PfGW456L13_1586 at 1750.900 kb on + strand, within PfGW456L13_1586 at 1750.900 kb on + strand, within PfGW456L13_1586 at 1750.900 kb on + strand, within PfGW456L13_1586 at 1750.900 kb on + strand, within PfGW456L13_1586 at 1750.901 kb on - strand, within PfGW456L13_1586 at 1750.901 kb on - strand, within PfGW456L13_1586 at 1750.901 kb on - strand, within PfGW456L13_1586 at 1750.901 kb on - strand, within PfGW456L13_1586 at 1751.047 kb on + strand, within PfGW456L13_1586 at 1751.047 kb on + strand, within PfGW456L13_1586 at 1751.048 kb on - strand, within PfGW456L13_1586 at 1751.084 kb on + strand at 1751.084 kb on + strand at 1751.085 kb on - strand at 1751.092 kb on + strand at 1751.092 kb on + strand at 1751.104 kb on + strand at 1751.104 kb on + strand at 1751.105 kb on - strand at 1751.105 kb on - strand at 1751.105 kb on - strand at 1751.119 kb on + strand at 1751.119 kb on + strand at 1751.119 kb on + strand at 1751.119 kb on + strand at 1751.119 kb on + strand at 1751.119 kb on + strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.120 kb on - strand at 1751.144 kb on + strand at 1751.144 kb on + strand at 1751.144 kb on + strand at 1751.145 kb on - strand at 1751.145 kb on - strand at 1751.358 kb on + strand, within PfGW456L13_1587 at 1751.473 kb on + strand at 1751.473 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.584 kb on + strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.585 kb on - strand at 1751.732 kb on + strand at 1751.732 kb on + strand at 1751.732 kb on + strand at 1751.733 kb on - strand at 1751.930 kb on + strand, within PfGW456L13_1588 at 1751.930 kb on + strand, within PfGW456L13_1588 at 1751.930 kb on + strand, within PfGW456L13_1588 at 1751.930 kb on + strand, within PfGW456L13_1588 at 1751.930 kb on + strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.931 kb on - strand, within PfGW456L13_1588 at 1751.973 kb on + strand, within PfGW456L13_1588 at 1751.973 kb on + strand, within PfGW456L13_1588 at 1751.978 kb on + strand, within PfGW456L13_1588 at 1751.979 kb on - strand, within PfGW456L13_1588 at 1751.979 kb on - strand, within PfGW456L13_1588 at 1752.027 kb on + strand, within PfGW456L13_1588 at 1752.028 kb on - strand, within PfGW456L13_1588 at 1752.028 kb on - strand, within PfGW456L13_1588 at 1752.028 kb on - strand, within PfGW456L13_1588 at 1752.055 kb on + strand, within PfGW456L13_1588 at 1752.055 kb on + strand, within PfGW456L13_1588 at 1752.056 kb on - strand, within PfGW456L13_1588 at 1752.056 kb on - strand, within PfGW456L13_1588 at 1752.056 kb on - strand, within PfGW456L13_1588 at 1752.056 kb on - strand, within PfGW456L13_1588 at 1752.056 kb on - strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.105 kb on + strand, within PfGW456L13_1588 at 1752.106 kb on - strand, within PfGW456L13_1588 at 1752.106 kb on - strand, within PfGW456L13_1588 at 1752.106 kb on - strand, within PfGW456L13_1588 at 1752.106 kb on - strand, within PfGW456L13_1588
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,750,447 + -1.7 1,750,447 + +0.3 1,750,447 + -0.4 1,750,447 + -0.3 1,750,447 + +1.1 1,750,447 + -0.3 1,750,447 + +0.2 1,750,448 - -1.7 1,750,448 - -0.3 1,750,448 - +0.2 1,750,448 - +0.9 1,750,478 + +0.7 1,750,478 + -0.3 1,750,478 + +0.1 1,750,478 + -0.6 1,750,478 + -0.2 1,750,478 + +0.3 1,750,479 - +0.0 1,750,479 - +0.0 1,750,525 - +0.5 1,750,525 - -0.4 1,750,539 + +1.8 1,750,542 - +0.1 1,750,573 + -0.8 1,750,720 + +0.6 1,750,721 - -0.4 1,750,804 + PfGW456L13_1586 0.28 +0.2 1,750,805 - PfGW456L13_1586 0.29 -1.9 1,750,805 - PfGW456L13_1586 0.29 -0.7 1,750,805 - PfGW456L13_1586 0.29 +1.2 1,750,806 + PfGW456L13_1586 0.29 +1.2 1,750,806 + PfGW456L13_1586 0.29 -0.2 1,750,806 + PfGW456L13_1586 0.29 -1.7 1,750,806 + PfGW456L13_1586 0.29 -0.4 1,750,806 + PfGW456L13_1586 0.29 -0.4 1,750,806 + PfGW456L13_1586 0.29 -0.3 1,750,806 + PfGW456L13_1586 0.29 +0.6 1,750,806 + PfGW456L13_1586 0.29 +0.2 1,750,806 + PfGW456L13_1586 0.29 +0.7 1,750,806 + PfGW456L13_1586 0.29 +0.1 1,750,806 + PfGW456L13_1586 0.29 -0.2 1,750,806 + PfGW456L13_1586 0.29 -0.2 1,750,807 - +1.6 1,750,807 - PfGW456L13_1586 0.29 -0.4 1,750,807 - PfGW456L13_1586 0.29 +0.6 1,750,807 - PfGW456L13_1586 0.29 -0.3 1,750,807 - PfGW456L13_1586 0.29 -0.1 1,750,807 - PfGW456L13_1586 0.29 +0.4 1,750,807 - PfGW456L13_1586 0.29 -1.0 1,750,807 - PfGW456L13_1586 0.29 +0.9 1,750,807 - PfGW456L13_1586 0.29 +0.4 1,750,807 - PfGW456L13_1586 0.29 +0.8 1,750,807 - PfGW456L13_1586 0.29 -0.8 1,750,810 + PfGW456L13_1586 0.30 -0.3 1,750,810 + PfGW456L13_1586 0.30 -1.0 1,750,810 + PfGW456L13_1586 0.30 -0.1 1,750,810 + PfGW456L13_1586 0.30 +0.7 1,750,810 + PfGW456L13_1586 0.30 +0.4 1,750,810 + PfGW456L13_1586 0.30 -0.1 1,750,810 + PfGW456L13_1586 0.30 +0.5 1,750,810 + PfGW456L13_1586 0.30 +0.2 1,750,811 - PfGW456L13_1586 0.30 +0.2 1,750,811 - PfGW456L13_1586 0.30 -0.2 1,750,811 - PfGW456L13_1586 0.30 -0.3 1,750,870 + PfGW456L13_1586 0.43 +0.8 1,750,871 - PfGW456L13_1586 0.43 +0.7 1,750,900 + PfGW456L13_1586 0.50 +0.1 1,750,900 + PfGW456L13_1586 0.50 -0.1 1,750,900 + PfGW456L13_1586 0.50 +2.7 1,750,900 + PfGW456L13_1586 0.50 -0.5 1,750,900 + PfGW456L13_1586 0.50 -0.2 1,750,901 - PfGW456L13_1586 0.50 +0.8 1,750,901 - PfGW456L13_1586 0.50 -0.2 1,750,901 - PfGW456L13_1586 0.50 -0.0 1,750,901 - PfGW456L13_1586 0.50 +0.8 1,751,047 + PfGW456L13_1586 0.83 +0.0 1,751,047 + PfGW456L13_1586 0.83 +0.4 1,751,048 - PfGW456L13_1586 0.83 +1.8 1,751,084 + -0.0 1,751,084 + +2.2 1,751,085 - -0.2 1,751,092 + -0.2 1,751,092 + +0.2 1,751,104 + -0.4 1,751,104 + +0.4 1,751,105 - -0.4 1,751,105 - +0.0 1,751,105 - -0.0 1,751,119 + -0.1 1,751,119 + -1.2 1,751,119 + -0.7 1,751,119 + -0.0 1,751,119 + +0.4 1,751,119 + +4.0 1,751,120 - -0.0 1,751,120 - -0.8 1,751,120 - +0.3 1,751,120 - +0.2 1,751,120 - -0.3 1,751,120 - -0.0 1,751,120 - +0.2 1,751,120 - +0.9 1,751,120 - -0.4 1,751,120 - +1.0 1,751,120 - +0.3 1,751,144 + +0.1 1,751,144 + +0.3 1,751,144 + +0.4 1,751,145 - -0.2 1,751,145 - +0.2 1,751,358 + PfGW456L13_1587 0.41 -0.0 1,751,473 + +0.4 1,751,473 + +1.0 1,751,584 + -0.1 1,751,584 + -0.1 1,751,584 + -0.3 1,751,584 + -0.0 1,751,584 + -0.1 1,751,584 + +0.6 1,751,584 + -0.0 1,751,585 - +0.9 1,751,585 - +0.5 1,751,585 - +0.3 1,751,585 - +0.7 1,751,585 - +0.1 1,751,585 - +0.7 1,751,585 - +0.0 1,751,585 - -2.2 1,751,732 + -1.9 1,751,732 + +1.0 1,751,732 + +1.1 1,751,733 - -0.0 1,751,930 + PfGW456L13_1588 0.33 +0.2 1,751,930 + PfGW456L13_1588 0.33 +0.5 1,751,930 + PfGW456L13_1588 0.33 -0.0 1,751,930 + PfGW456L13_1588 0.33 +0.1 1,751,930 + PfGW456L13_1588 0.33 -1.8 1,751,931 - PfGW456L13_1588 0.33 +0.3 1,751,931 - PfGW456L13_1588 0.33 +0.9 1,751,931 - PfGW456L13_1588 0.33 +1.0 1,751,931 - PfGW456L13_1588 0.33 -0.0 1,751,931 - PfGW456L13_1588 0.33 +0.3 1,751,931 - PfGW456L13_1588 0.33 +0.4 1,751,973 + PfGW456L13_1588 0.38 -0.0 1,751,973 + PfGW456L13_1588 0.38 -0.2 1,751,978 + PfGW456L13_1588 0.39 +0.9 1,751,979 - PfGW456L13_1588 0.39 +0.1 1,751,979 - PfGW456L13_1588 0.39 +0.9 1,752,027 + PfGW456L13_1588 0.45 +0.4 1,752,028 - PfGW456L13_1588 0.45 +0.7 1,752,028 - PfGW456L13_1588 0.45 +0.5 1,752,028 - PfGW456L13_1588 0.45 +1.3 1,752,055 + PfGW456L13_1588 0.49 +0.3 1,752,055 + PfGW456L13_1588 0.49 -0.3 1,752,056 - PfGW456L13_1588 0.49 +0.8 1,752,056 - PfGW456L13_1588 0.49 +0.8 1,752,056 - PfGW456L13_1588 0.49 +0.8 1,752,056 - PfGW456L13_1588 0.49 +0.0 1,752,056 - PfGW456L13_1588 0.49 -0.1 1,752,105 + PfGW456L13_1588 0.55 +0.9 1,752,105 + PfGW456L13_1588 0.55 -0.0 1,752,105 + PfGW456L13_1588 0.55 -0.8 1,752,105 + PfGW456L13_1588 0.55 +0.3 1,752,105 + PfGW456L13_1588 0.55 +0.2 1,752,105 + PfGW456L13_1588 0.55 -0.3 1,752,105 + PfGW456L13_1588 0.55 +0.2 1,752,106 - PfGW456L13_1588 0.55 +0.3 1,752,106 - PfGW456L13_1588 0.55 -0.0 1,752,106 - PfGW456L13_1588 0.55 +0.7 1,752,106 - PfGW456L13_1588 0.55 +0.7
Or see this region's nucleotide sequence