Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26815

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,987,029	+		PFLU_RS26810	0.73	-0.0
5,987,029	+		PFLU_RS26810	0.73	+0.8
5,987,029	+		PFLU_RS26810	0.73	-0.3
5,987,030	-		PFLU_RS26810	0.73	+0.2
5,987,041	+		PFLU_RS26810	0.74	+0.1
5,987,041	+		PFLU_RS26810	0.74	-2.5
5,987,041	+		PFLU_RS26810	0.74	+1.4
5,987,042	-		PFLU_RS26810	0.74	-0.7
5,987,042	-		PFLU_RS26810	0.74	-0.8
5,987,042	-		PFLU_RS26810	0.74	+0.6
5,987,042	-		PFLU_RS26810	0.74	-2.5
5,987,042	-		PFLU_RS26810	0.74	+0.6
5,987,238	+		PFLU_RS26810	0.89	-1.0
5,987,238	+		PFLU_RS26810	0.89	+0.0
5,987,239	-		PFLU_RS26810	0.89	+0.2
5,987,239	-		PFLU_RS26810	0.89	-0.5
5,987,381	+				-3.0
5,987,381	+				-0.2
5,987,381	+				+1.6
5,987,381	+				+0.2
5,987,381	+				+0.4
5,987,381	+				+0.4
5,987,382	-				-0.8
5,987,382	-				-1.4
5,987,382	-				-0.7
5,987,382	-				-0.1
5,987,382	-				+0.0
5,987,382	-				-0.2
5,987,382	-				-0.7
5,987,382	-				-0.3
5,987,440	+				+2.2
5,987,440	+				+0.7
5,987,440	+				+0.6
5,987,440	+				+0.0
5,987,441	-				+1.0
5,987,441	-				+4.0
5,987,456	+				-0.2
5,987,456	+				+0.9
5,987,456	+				+0.2
5,987,456	+				+1.7
5,987,456	+				-0.8
5,987,456	+				+0.9
5,987,457	-				-1.2
5,987,457	-				+0.7
5,987,457	-				-0.6
5,987,457	-				+0.3
5,987,457	-				+1.4
5,987,457	-				-0.0
5,987,457	-				-1.4
5,987,457	-				-2.3
5,987,544	+				+0.6
5,987,544	+				-0.2
5,987,544	+				-0.8
5,987,544	+				-1.7
5,987,544	+				-0.2
5,987,544	+				+0.1
5,987,544	+				+2.2
5,987,544	+				+0.5
5,987,545	-				+1.5
5,987,545	-				-1.3
5,987,545	-				-0.1
5,987,545	-				+0.6
5,987,545	-				+1.8
5,987,561	+				-1.0
5,987,561	+				-0.2
5,987,562	-				+0.5
5,987,643	+				-1.2
5,987,643	+				+0.8
5,987,643	+				+0.1
5,987,643	+				-0.5
5,987,643	+				+0.6
5,987,643	+				+0.1
5,987,643	+				-0.2
5,987,643	+				-0.7
5,987,644	-				-0.9
5,987,644	-				+2.1
5,987,644	-				-0.0
5,987,646	+				+0.3
5,987,647	-				-0.1
5,987,647	-				+0.5
5,987,647	-				-0.1
5,987,647	-				-0.8
5,987,693	+		PFLU_RS26815	0.12	+0.3
5,987,693	+		PFLU_RS26815	0.12	+1.1
5,987,693	+		PFLU_RS26815	0.12	+0.9
5,987,694	-		PFLU_RS26815	0.12	-0.4
5,987,710	-		PFLU_RS26815	0.14	+1.6
5,987,710	-		PFLU_RS26815	0.14	+0.6
5,987,735	+		PFLU_RS26815	0.16	-0.1
5,987,751	+		PFLU_RS26815	0.18	-0.5
5,987,751	+		PFLU_RS26815	0.18	+0.4
5,987,752	-		PFLU_RS26815	0.18	+0.8
5,987,752	-		PFLU_RS26815	0.18	+0.6
5,987,752	-		PFLU_RS26815	0.18	-1.3
5,987,752	-		PFLU_RS26815	0.18	+0.8
5,987,894	+		PFLU_RS26815	0.31	-0.8
5,987,895	-		PFLU_RS26815	0.31	-0.8
5,987,895	-		PFLU_RS26815	0.31	-0.2
5,987,895	-		PFLU_RS26815	0.31	-0.4
5,987,915	+		PFLU_RS26815	0.33	+0.1
5,987,915	+		PFLU_RS26815	0.33	+1.9
5,987,915	+		PFLU_RS26815	0.33	-0.3
5,987,915	+		PFLU_RS26815	0.33	-2.2
5,987,915	+		PFLU_RS26815	0.33	-1.2
5,987,915	+		PFLU_RS26815	0.33	+1.1
5,987,915	+		PFLU_RS26815	0.33	+1.2
5,987,915	+		PFLU_RS26815	0.33	+0.4
5,987,916	-		PFLU_RS26815	0.33	+0.2
5,987,916	-		PFLU_RS26815	0.33	-0.6
5,987,916	-		PFLU_RS26815	0.33	+1.2
5,987,916	-		PFLU_RS26815	0.33	+0.2
5,987,916	-		PFLU_RS26815	0.33	-0.1
5,987,916	-		PFLU_RS26815	0.33	+0.3
5,987,916	-		PFLU_RS26815	0.33	-0.2
5,987,950	+		PFLU_RS26815	0.36	-0.0
5,987,950	+		PFLU_RS26815	0.36	-0.6
5,987,950	+		PFLU_RS26815	0.36	+0.7
5,987,951	-		PFLU_RS26815	0.36	-0.2
5,987,951	-		PFLU_RS26815	0.36	+1.0
5,987,951	-		PFLU_RS26815	0.36	+1.5
5,988,249	-		PFLU_RS26815	0.64	+0.6
5,988,374	+		PFLU_RS26815	0.75	-2.0
5,988,374	+		PFLU_RS26815	0.75	-0.9
5,988,374	+		PFLU_RS26815	0.75	-0.1
5,988,375	-		PFLU_RS26815	0.75	+1.5
5,988,375	-		PFLU_RS26815	0.75	-2.3
5,988,375	-		PFLU_RS26815	0.75	-0.9
5,988,375	-		PFLU_RS26815	0.75	+0.2
5,988,375	-		PFLU_RS26815	0.75	+0.8
5,988,375	-		PFLU_RS26815	0.75	-0.5
5,988,375	-		PFLU_RS26815	0.75	+0.6
5,988,375	-		PFLU_RS26815	0.75	+0.7
5,988,375	-		PFLU_RS26815	0.75	-0.1
5,988,375	-		PFLU_RS26815	0.75	+0.2
5,988,375	-		PFLU_RS26815	0.75	-0.1
5,988,375	-		PFLU_RS26815	0.75	+0.3
5,988,375	-		PFLU_RS26815	0.75	+0.6
5,988,385	-		PFLU_RS26815	0.76	+1.9
5,988,489	+		PFLU_RS26815	0.86	+0.2
5,988,509	+		PFLU_RS26815	0.88	+0.1
5,988,510	-		PFLU_RS26815	0.88	+0.1
5,988,510	-		PFLU_RS26815	0.88	-0.0
5,988,510	-		PFLU_RS26815	0.88	+1.9
5,988,532	+		PFLU_RS26815	0.90	-0.1
5,988,543	+				-0.0
5,988,543	+				-0.2
5,988,544	-				-0.2
5,988,562	-				-0.1
5,988,599	+				-0.8
5,988,600	-				+1.3
5,988,659	+				+1.1
5,988,659	+				+0.5
5,988,660	-				-0.6
5,988,662	+				+0.3
5,988,662	+				+1.8
5,988,662	+				-0.4
5,988,663	-				+0.8
5,988,663	-				-0.4
5,988,663	-				-0.3
5,988,680	+				+0.7
5,988,681	-				+1.1
5,988,755	+				+0.5
5,988,765	+				-1.7
5,988,808	+				-0.3
5,988,808	+				+0.3
5,988,926	+		PFLU_RS26820	0.11	+0.5
5,988,926	+		PFLU_RS26820	0.11	+0.3
5,988,926	+		PFLU_RS26820	0.11	+0.1
5,988,926	+		PFLU_RS26820	0.11	+1.6
5,988,926	+		PFLU_RS26820	0.11	-0.0
5,988,926	+		PFLU_RS26820	0.11	-0.3
5,988,926	+		PFLU_RS26820	0.11	-1.5
5,988,926	+		PFLU_RS26820	0.11	+1.3
5,988,926	+		PFLU_RS26820	0.11	-0.6
5,988,926	+		PFLU_RS26820	0.11	+0.2
5,988,927	-		PFLU_RS26820	0.11	-0.3
5,988,927	-		PFLU_RS26820	0.11	+0.8
5,988,927	-		PFLU_RS26820	0.11	+0.5
5,988,927	-		PFLU_RS26820	0.11	-0.8
5,988,927	-		PFLU_RS26820	0.11	-0.0
5,988,927	-		PFLU_RS26820	0.11	+0.9
5,988,927	-		PFLU_RS26820	0.11	-0.8
5,988,927	-		PFLU_RS26820	0.11	+0.3
5,988,927	-		PFLU_RS26820	0.11	+1.0
5,988,960	+		PFLU_RS26820	0.16	+1.1
5,988,960	+		PFLU_RS26820	0.16	-0.1
5,988,960	+		PFLU_RS26820	0.16	-0.1
5,988,960	+		PFLU_RS26820	0.16	+2.9
5,988,960	+		PFLU_RS26820	0.16	-0.9
5,988,961	-		PFLU_RS26820	0.17	+0.2
5,988,961	-		PFLU_RS26820	0.17	-1.2
5,988,961	-		PFLU_RS26820	0.17	+0.5
5,988,961	-		PFLU_RS26820	0.17	-0.1
5,988,961	-		PFLU_RS26820	0.17	+1.0
5,988,961	-		PFLU_RS26820	0.17	-1.3
5,988,961	-		PFLU_RS26820	0.17	+1.3
5,988,961	-		PFLU_RS26820	0.17	-1.0
5,989,013	+		PFLU_RS26820	0.25	-0.4
5,989,086	+		PFLU_RS26820	0.36	+0.7
5,989,086	+		PFLU_RS26820	0.36	-0.0
5,989,086	+		PFLU_RS26820	0.36	+0.3
5,989,087	-		PFLU_RS26820	0.36	+0.2
5,989,175	+		PFLU_RS26820	0.50	+0.3
5,989,176	-		PFLU_RS26820	0.50	+0.0
5,989,233	+		PFLU_RS26820	0.59	+0.2
5,989,234	-		PFLU_RS26820	0.59	-1.4
5,989,259	+		PFLU_RS26820	0.63	+0.2
5,989,259	+		PFLU_RS26820	0.63	+0.9
5,989,260	-		PFLU_RS26820	0.63	-1.5
5,989,262	+		PFLU_RS26820	0.63	+0.8
5,989,263	-		PFLU_RS26820	0.63	+0.7
5,989,263	-		PFLU_RS26820	0.63	-0.3
5,989,274	+		PFLU_RS26820	0.65	-1.1
5,989,275	-		PFLU_RS26820	0.65	-0.8
5,989,309	+		PFLU_RS26820	0.71	-2.7
5,989,309	+		PFLU_RS26820	0.71	+0.0
5,989,372	+		PFLU_RS26820	0.80	+0.1
5,989,373	-		PFLU_RS26820	0.80	-0.5
5,989,373	-		PFLU_RS26820	0.80	-0.3
5,989,416	+		PFLU_RS26820	0.87	+0.2
5,989,416	+		PFLU_RS26820	0.87	+1.8
5,989,417	-		PFLU_RS26820	0.87	+0.2
5,989,440	+				-0.9
5,989,440	+				+0.1
5,989,440	+				+0.1
5,989,440	+				+0.9
5,989,440	+				+1.6
5,989,440	+				+0.0
5,989,440	+				+1.9
5,989,440	+				-1.1
5,989,440	+				-0.5
5,989,440	+				+0.5
5,989,441	-				+0.6
5,989,441	-				+0.7
5,989,441	-				+0.2
5,989,441	-				-0.2
5,989,441	-				-0.8
5,989,441	-				+0.0
5,989,441	-				-0.3
5,989,441	-				+0.6
5,989,441	-				+1.0
5,989,441	-				+0.9
5,989,441	-				+0.5
5,989,441	-				+0.0
5,989,441	-				+0.3
5,989,441	-				+1.1
5,989,441	-				-1.7
5,989,441	-				+0.0
5,989,441	-				+1.1
5,989,494	+				-0.4
5,989,494	+				+0.2
5,989,494	+				+0.0
5,989,495	-				+0.2
5,989,495	-				+0.4
5,989,495	-				-0.5
5,989,495	-				+1.0
5,989,548	+		PFLU_RS26825	0.29	-1.0
5,989,549	-		PFLU_RS26825	0.29	+0.8
5,989,549	-		PFLU_RS26825	0.29	+0.2
5,989,549	-		PFLU_RS26825	0.29	+0.7
5,989,580	+		PFLU_RS26825	0.38	-1.6
5,989,581	-		PFLU_RS26825	0.38	+0.7