Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS21790

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
4,904,725	+		PFLU_RS21785	0.37	-0.3
4,904,725	+		PFLU_RS21785	0.37	+0.5
4,904,726	-		PFLU_RS21785	0.37	+0.6
4,905,044	+		PFLU_RS21785	0.60	+1.3
4,905,082	+		PFLU_RS21785	0.63	+0.3
4,905,082	+		PFLU_RS21785	0.63	+1.0
4,905,082	+		PFLU_RS21785	0.63	+0.0
4,905,083	-		PFLU_RS21785	0.63	+0.5
4,905,083	-		PFLU_RS21785	0.63	-0.2
4,905,083	-		PFLU_RS21785	0.63	+0.6
4,905,083	-		PFLU_RS21785	0.63	+0.1
4,905,083	-		PFLU_RS21785	0.63	+0.4
4,905,269	+		PFLU_RS21785	0.77	+1.0
4,905,269	+		PFLU_RS21785	0.77	+1.6
4,905,269	+		PFLU_RS21785	0.77	+0.6
4,905,270	-		PFLU_RS21785	0.77	-0.6
4,905,292	+		PFLU_RS21785	0.78	+1.2
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	+0.4
4,905,429	+		PFLU_RS21785	0.88	+0.3
4,905,429	+		PFLU_RS21785	0.88	-0.7
4,905,429	+		PFLU_RS21785	0.88	-0.3
4,905,429	+		PFLU_RS21785	0.88	-0.0
4,905,429	+		PFLU_RS21785	0.88	+0.2
4,905,429	+		PFLU_RS21785	0.88	-0.5
4,905,429	+		PFLU_RS21785	0.88	-1.6
4,905,429	+		PFLU_RS21785	0.88	+1.2
4,905,429	+		PFLU_RS21785	0.88	+0.0
4,905,429	+		PFLU_RS21785	0.88	+0.5
4,905,429	+		PFLU_RS21785	0.88	+0.7
4,905,429	+		PFLU_RS21785	0.88	-0.1
4,905,429	+		PFLU_RS21785	0.88	-1.8
4,905,429	+		PFLU_RS21785	0.88	-0.3
4,905,430	-		PFLU_RS21785	0.88	+0.4
4,905,430	-		PFLU_RS21785	0.88	+0.1
4,905,430	-		PFLU_RS21785	0.88	-1.0
4,905,430	-		PFLU_RS21785	0.88	-1.3
4,905,430	-		PFLU_RS21785	0.88	+0.1
4,905,430	-		PFLU_RS21785	0.88	+0.4
4,905,430	-		PFLU_RS21785	0.88	+1.6
4,905,430	-		PFLU_RS21785	0.88	+0.0
4,905,430	-		PFLU_RS21785	0.88	-1.2
4,905,430	-		PFLU_RS21785	0.88	+1.0
4,905,430	-		PFLU_RS21785	0.88	+1.2
4,905,430	-		PFLU_RS21785	0.88	+1.0
4,905,430	-		PFLU_RS21785	0.88	+0.0
4,905,430	-		PFLU_RS21785	0.88	-1.1
4,905,430	-		PFLU_RS21785	0.88	+1.5
4,905,430	-		PFLU_RS21785	0.88	+0.3
4,905,430	-		PFLU_RS21785	0.88	+1.6
4,905,573	+				-0.7
4,905,573	+				+0.9
4,905,573	+				+0.0
4,905,574	-				+1.3
4,905,574	-				+0.9
4,905,574	-				+0.0
4,905,574	-				+0.4
4,905,574	-				+1.4
4,905,574	-				+0.6
4,905,574	-				-0.2
4,905,591	-				-1.0
4,905,591	-				-0.5
4,905,845	+		PFLU_RS21790	0.20	+1.7
4,905,845	+		PFLU_RS21790	0.20	-0.1
4,905,846	-		PFLU_RS21790	0.20	+0.2
4,905,846	-		PFLU_RS21790	0.20	-0.0
4,905,846	-		PFLU_RS21790	0.20	-0.1
4,905,846	-		PFLU_RS21790	0.20	+0.5
4,905,846	-		PFLU_RS21790	0.20	-0.9
4,905,846	-		PFLU_RS21790	0.20	+0.3
4,905,846	-		PFLU_RS21790	0.20	-1.1
4,905,846	-		PFLU_RS21790	0.20	+1.1
4,905,846	-		PFLU_RS21790	0.20	-0.9
4,905,846	-		PFLU_RS21790	0.20	+1.4
4,906,190	+		PFLU_RS21790	0.49	-1.7
4,906,190	+		PFLU_RS21790	0.49	+2.1
4,906,190	+		PFLU_RS21790	0.49	+1.2
4,906,190	+		PFLU_RS21790	0.49	+1.4
4,906,191	-		PFLU_RS21790	0.49	+0.6
4,906,191	-		PFLU_RS21790	0.49	+0.1
4,906,191	-		PFLU_RS21790	0.49	-1.0
4,906,673	+		PFLU_RS21790	0.89	+0.8
4,906,785	+				+0.5
4,906,785	+				+0.8
4,906,786	-				-0.6
4,906,786	-				+0.2
4,906,786	-				+0.5
4,906,786	-				+1.1
4,906,786	-				+0.6
4,906,789	+				+0.9
4,906,789	+				-0.1
4,906,789	+				-0.1
4,906,789	+				+0.6
4,906,789	+				+0.7
4,906,789	+				+0.4
4,906,789	+				+1.1
4,906,789	+				-0.9
4,906,789	+				-1.0
4,906,789	+				+1.0
4,906,790	-				-2.8
4,906,790	-				-1.3
4,906,790	-				-0.3
4,906,790	-				-0.5
4,906,790	-				+0.5
4,906,790	-				+0.4
4,906,790	-				+0.6
4,906,790	-				+0.0
4,906,790	-				+0.3
4,906,790	-				+0.3
4,906,839	+				+0.3
4,906,839	+				+0.2
4,906,839	+				+0.6
4,906,840	-				+0.3
4,906,862	+				+0.5
4,906,863	-				+1.3
4,906,868	+				+1.0
4,906,868	+				+1.4
4,906,868	+				-0.2
4,906,869	-				-1.0
4,906,869	-				-0.4
4,906,869	-				+0.0
4,906,869	-				-0.5
4,906,909	+				+1.9
4,906,909	+				-0.3
4,906,910	-				+0.7
4,906,910	-				+0.3
4,906,910	-				-0.8
4,906,910	-				+1.3
4,906,966	+		PFLU_RS31760	0.51	+0.3
4,906,966	+		PFLU_RS31760	0.51	+1.5
4,906,966	+		PFLU_RS31760	0.51	+0.5
4,906,966	+		PFLU_RS31760	0.51	+1.0
4,906,966	+		PFLU_RS31760	0.51	+0.2
4,906,966	+		PFLU_RS31760	0.51	-0.4
4,906,966	+		PFLU_RS31760	0.51	+0.0
4,906,966	+		PFLU_RS31760	0.51	+1.6
4,906,966	+		PFLU_RS31760	0.51	+1.4
4,906,966	+		PFLU_RS31760	0.51	+0.8
4,906,966	+		PFLU_RS31760	0.51	+0.1
4,906,966	+		PFLU_RS31760	0.51	+1.5
4,906,967	-		PFLU_RS31760	0.52	+0.9
4,906,967	-		PFLU_RS31760	0.52	-0.2
4,906,967	-		PFLU_RS31760	0.52	-0.4
4,906,967	-		PFLU_RS31760	0.52	+0.5
4,906,967	-		PFLU_RS31760	0.52	+0.8
4,906,967	-		PFLU_RS31760	0.52	+1.3
4,906,967	-		PFLU_RS31760	0.52	+1.5
4,906,997	+		PFLU_RS31760	0.78	+0.3
4,907,032	+				-0.2
4,907,032	+				+0.9
4,907,033	-				+0.1
4,907,033	-				+0.7
4,907,117	+				+1.3
4,907,122	+				+1.7
4,907,122	+				+1.8
4,907,122	+				+0.5
4,907,122	+				+1.9
4,907,123	-				+1.6
4,907,123	-				+1.7
4,907,123	-				+1.7
4,907,123	-				+1.4
4,907,123	-				+2.2
4,907,123	-				+1.8
4,907,123	-				+1.1
4,907,123	-				+0.8
4,907,245	+		PFLU_RS21795	0.11	+2.4
4,907,303	+		PFLU_RS21795	0.15	-0.0
4,907,303	+		PFLU_RS21795	0.15	+0.5
4,907,380	+		PFLU_RS21795	0.20	+1.1
4,907,380	+		PFLU_RS21795	0.20	+2.4
4,907,380	+		PFLU_RS21795	0.20	+1.0
4,907,381	-		PFLU_RS21795	0.20	+2.1
4,907,381	-		PFLU_RS21795	0.20	+1.4
4,907,423	-		PFLU_RS21795	0.23	+1.2
4,907,423	-		PFLU_RS21795	0.23	+1.8
4,907,474	+		PFLU_RS21795	0.27	+0.7
4,907,474	+		PFLU_RS21795	0.27	+0.6
4,907,474	+		PFLU_RS21795	0.27	+1.2
4,907,474	+		PFLU_RS21795	0.27	+1.4
4,907,474	+		PFLU_RS21795	0.27	+1.2
4,907,474	+		PFLU_RS21795	0.27	+1.6
4,907,474	+		PFLU_RS21795	0.27	+1.4
4,907,474	+		PFLU_RS21795	0.27	+1.3
4,907,474	+		PFLU_RS21795	0.27	+1.0
4,907,474	+		PFLU_RS21795	0.27	+2.1
4,907,475	-		PFLU_RS21795	0.27	+2.0
4,907,475	-		PFLU_RS21795	0.27	+1.6
4,907,475	-		PFLU_RS21795	0.27	+1.7
4,907,628	+		PFLU_RS21795	0.37	+2.1
4,907,628	+		PFLU_RS21795	0.37	+0.0
4,907,628	+		PFLU_RS21795	0.37	+1.2
4,907,629	-		PFLU_RS21795	0.37	+2.2
4,907,629	-		PFLU_RS21795	0.37	+2.1
4,907,629	-		PFLU_RS21795	0.37	+2.6
4,907,629	-		PFLU_RS21795	0.37	+1.5
4,907,629	-		PFLU_RS21795	0.37	+3.0
4,907,629	-		PFLU_RS21795	0.37	+1.3
4,907,629	-		PFLU_RS21795	0.37	+1.8
4,907,629	-		PFLU_RS21795	0.37	+2.0
4,907,629	-		PFLU_RS21795	0.37	+0.1
4,907,629	-		PFLU_RS21795	0.37	+2.0
4,907,641	+		PFLU_RS21795	0.38	+1.5
4,907,642	-		PFLU_RS21795	0.38	+1.8
4,907,642	-		PFLU_RS21795	0.38	+1.8
4,907,642	-		PFLU_RS21795	0.38	+2.4
4,907,644	+		PFLU_RS21795	0.38	+1.0
4,907,644	+		PFLU_RS21795	0.38	+2.2
4,907,644	+		PFLU_RS21795	0.38	+1.8
4,907,645	-		PFLU_RS21795	0.38	+2.2
4,907,715	+		PFLU_RS21795	0.43	+1.4
4,907,715	+		PFLU_RS21795	0.43	+1.2
4,907,715	+		PFLU_RS21795	0.43	+1.0
4,907,715	+		PFLU_RS21795	0.43	+0.9
4,907,715	+		PFLU_RS21795	0.43	+0.4
4,907,715	+		PFLU_RS21795	0.43	+2.3
4,907,715	+		PFLU_RS21795	0.43	+0.6
4,907,715	+		PFLU_RS21795	0.43	+2.1
4,907,715	+		PFLU_RS21795	0.43	+1.5
4,907,715	+		PFLU_RS21795	0.43	+1.4
4,907,715	+		PFLU_RS21795	0.43	+1.4
4,907,715	+		PFLU_RS21795	0.43	+0.8
4,907,715	+		PFLU_RS21795	0.43	+1.0
4,907,715	+		PFLU_RS21795	0.43	+2.2
4,907,715	+		PFLU_RS21795	0.43	+1.1
4,907,715	+		PFLU_RS21795	0.43	+2.4
4,907,715	+		PFLU_RS21795	0.43	+0.9
4,907,715	+		PFLU_RS21795	0.43	+1.2
4,907,715	+		PFLU_RS21795	0.43	+1.3
4,907,715	+		PFLU_RS21795	0.43	+0.7
4,907,715	+		PFLU_RS21795	0.43	-0.2
4,907,715	+		PFLU_RS21795	0.43	+1.1
4,907,715	+		PFLU_RS21795	0.43	+1.1
4,907,715	+		PFLU_RS21795	0.43	+2.2
4,907,715	+		PFLU_RS21795	0.43	+0.9
4,907,715	+		PFLU_RS21795	0.43	+1.2
4,907,716	-		PFLU_RS21795	0.43	+1.9
4,907,716	-		PFLU_RS21795	0.43	+1.7
4,907,716	-		PFLU_RS21795	0.43	+1.6
4,907,716	-		PFLU_RS21795	0.43	+1.6
4,907,716	-		PFLU_RS21795	0.43	+2.2
4,907,716	-		PFLU_RS21795	0.43	+2.9
4,907,716	-		PFLU_RS21795	0.43	+1.1
4,907,716	-		PFLU_RS21795	0.43	+2.2
4,907,716	-		PFLU_RS21795	0.43	+1.1
4,907,716	-		PFLU_RS21795	0.43	+2.0
4,907,716	-		PFLU_RS21795	0.43	+1.1
4,907,716	-		PFLU_RS21795	0.43	+1.6
4,907,716	-		PFLU_RS21795	0.43	+1.2
4,907,716	-		PFLU_RS21795	0.43	+0.8
4,907,716	-		PFLU_RS21795	0.43	+1.7
4,907,716	-		PFLU_RS21795	0.43	+2.0
4,907,716	-		PFLU_RS21795	0.43	+1.1
4,907,716	-		PFLU_RS21795	0.43	+1.2
4,907,716	-		PFLU_RS21795	0.43	+2.0
4,907,716	-		PFLU_RS21795	0.43	+2.0
4,907,716	-		PFLU_RS21795	0.43	+1.6
4,907,716	-		PFLU_RS21795	0.43	+2.5
4,907,716	-		PFLU_RS21795	0.43	+1.3
4,907,716	-		PFLU_RS21795	0.43	+2.0
4,907,716	-		PFLU_RS21795	0.43	+1.6