Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS13190

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,978,748	+		PFLU_RS13180	0.83	+0.0
2,978,748	+		PFLU_RS13180	0.83	+0.5
2,978,748	+		PFLU_RS13180	0.83	+1.3
2,978,748	+		PFLU_RS13180	0.83	-0.3
2,978,749	-		PFLU_RS13180	0.84	-1.8
2,978,749	-		PFLU_RS13180	0.84	-0.3
2,978,840	+				+2.4
2,978,840	+				-0.5
2,978,840	+				+0.0
2,978,840	+				-0.8
2,978,841	-				-0.7
2,978,841	-				+0.9
2,978,841	-				-0.6
2,978,841	-				-0.3
2,978,841	-				+0.8
2,979,158	+		PFLU_RS13185	0.71	+1.3
2,979,158	+		PFLU_RS13185	0.71	+1.3
2,979,158	+		PFLU_RS13185	0.71	-0.3
2,979,158	+		PFLU_RS13185	0.71	+0.5
2,979,158	+		PFLU_RS13185	0.71	+1.9
2,979,158	+		PFLU_RS13185	0.71	+1.0
2,979,158	+		PFLU_RS13185	0.71	-0.8
2,979,158	+		PFLU_RS13185	0.71	-0.5
2,979,158	+		PFLU_RS13185	0.71	-0.5
2,979,158	+		PFLU_RS13185	0.71	+0.5
2,979,159	-		PFLU_RS13185	0.71	-0.3
2,979,159	-		PFLU_RS13185	0.71	-0.1
2,979,159	-		PFLU_RS13185	0.71	+0.8
2,979,159	-		PFLU_RS13185	0.71	+0.2
2,979,159	-		PFLU_RS13185	0.71	-1.1
2,979,159	-		PFLU_RS13185	0.71	+0.2
2,979,159	-		PFLU_RS13185	0.71	+0.4
2,979,159	-		PFLU_RS13185	0.71	+2.6
2,979,159	-		PFLU_RS13185	0.71	-2.7
2,979,172	+		PFLU_RS13185	0.74	+1.2
2,979,172	+		PFLU_RS13185	0.74	+0.0
2,979,172	+		PFLU_RS13185	0.74	-0.9
2,979,172	+		PFLU_RS13185	0.74	-0.0
2,979,173	-		PFLU_RS13185	0.74	+1.3
2,979,173	-		PFLU_RS13185	0.74	-0.8
2,979,173	-		PFLU_RS13185	0.74	+0.1
2,979,173	-		PFLU_RS13185	0.74	-0.6
2,979,173	-		PFLU_RS13185	0.74	+0.7
2,979,173	-		PFLU_RS13185	0.74	+0.7
2,979,173	-		PFLU_RS13185	0.74	-0.3
2,979,239	-		PFLU_RS13185	0.89	-0.2
2,979,239	-		PFLU_RS13185	0.89	-1.5
2,979,256	+				-0.7
2,979,256	+				-1.5
2,979,256	+				-0.7
2,979,256	+				-0.2
2,979,256	+				+0.3
2,979,256	+				+0.0
2,979,256	+				+0.0
2,979,257	-				+1.4
2,979,257	-				+0.0
2,979,257	-				-0.4
2,979,257	-				-3.0
2,979,301	+				+0.9
2,979,331	+				+0.5
2,979,331	+				+0.5
2,979,331	+				+1.2
2,979,332	-				+0.0
2,979,422	+				+0.4
2,979,492	+				+0.4
2,979,626	+				-0.5
2,979,686	-				+0.8
2,979,742	+		PFLU_RS13190	0.12	-1.4
2,979,742	+		PFLU_RS13190	0.12	+0.0
2,979,742	+		PFLU_RS13190	0.12	+0.1
2,979,742	+		PFLU_RS13190	0.12	-0.2
2,979,742	+		PFLU_RS13190	0.12	-1.7
2,979,742	+		PFLU_RS13190	0.12	-0.5
2,979,742	+		PFLU_RS13190	0.12	-0.5
2,979,742	+		PFLU_RS13190	0.12	+0.0
2,979,743	-		PFLU_RS13190	0.13	+0.4
2,979,743	-		PFLU_RS13190	0.13	-0.1
2,979,743	-		PFLU_RS13190	0.13	-0.1
2,979,743	-		PFLU_RS13190	0.13	+1.5
2,979,743	-		PFLU_RS13190	0.13	-1.5
2,979,934	+		PFLU_RS13190	0.32	-0.3
2,979,934	+		PFLU_RS13190	0.32	+0.7
2,979,935	-		PFLU_RS13190	0.32	-0.8
2,979,935	-		PFLU_RS13190	0.32	+0.4
2,979,996	+		PFLU_RS13190	0.38	-1.3
2,979,997	-		PFLU_RS13190	0.38	-2.1
2,979,997	-		PFLU_RS13190	0.38	+1.6
2,980,023	+		PFLU_RS13190	0.41	+0.0
2,980,036	+		PFLU_RS13190	0.42	+1.0
2,980,036	+		PFLU_RS13190	0.42	-0.1
2,980,037	-		PFLU_RS13190	0.42	+0.9
2,980,037	-		PFLU_RS13190	0.42	+1.3
2,980,037	-		PFLU_RS13190	0.42	+0.2
2,980,072	-		PFLU_RS13190	0.46	-2.7
2,980,098	-		PFLU_RS13190	0.48	-1.0
2,980,174	+		PFLU_RS13190	0.56	+0.0
2,980,174	+		PFLU_RS13190	0.56	+0.3
2,980,174	+		PFLU_RS13190	0.56	+1.6
2,980,174	+		PFLU_RS13190	0.56	+1.0
2,980,174	+		PFLU_RS13190	0.56	-0.5
2,980,174	+		PFLU_RS13190	0.56	-0.1
2,980,175	-		PFLU_RS13190	0.56	+0.8
2,980,175	-		PFLU_RS13190	0.56	-0.5
2,980,175	-		PFLU_RS13190	0.56	-1.6
2,980,175	-		PFLU_RS13190	0.56	+0.0
2,980,175	-		PFLU_RS13190	0.56	+0.5
2,980,175	-		PFLU_RS13190	0.56	+1.0
2,980,175	-		PFLU_RS13190	0.56	-1.3
2,980,175	-		PFLU_RS13190	0.56	+0.9
2,980,175	-		PFLU_RS13190	0.56	+0.3
2,980,175	-		PFLU_RS13190	0.56	+0.0
2,980,175	-		PFLU_RS13190	0.56	-0.1
2,980,183	+		PFLU_RS13190	0.57	+1.0
2,980,246	-		PFLU_RS13190	0.63	+0.3
2,980,273	+		PFLU_RS13190	0.66	-0.2
2,980,273	+		PFLU_RS13190	0.66	-0.5
2,980,273	+		PFLU_RS13190	0.66	-0.4
2,980,274	-		PFLU_RS13190	0.66	-0.1
2,980,274	-		PFLU_RS13190	0.66	-0.8
2,980,307	+		PFLU_RS13190	0.69	+0.4
2,980,358	-		PFLU_RS13190	0.74	+1.5
2,980,358	-		PFLU_RS13190	0.74	+0.2
2,980,358	-		PFLU_RS13190	0.74	-0.1
2,980,358	-		PFLU_RS13190	0.74	+1.8
2,980,361	+		PFLU_RS13190	0.75	-2.9
2,980,362	-		PFLU_RS13190	0.75	-1.0
2,980,362	-		PFLU_RS13190	0.75	+1.2
2,980,459	+		PFLU_RS13190	0.84	+0.3
2,980,582	+				-1.7
2,980,583	-				-2.0
2,980,583	-				+1.0
2,980,597	-				+0.8
2,980,597	-				+1.5
2,980,639	+				+0.2
2,980,639	+				+0.0
2,980,639	+				+0.6
2,980,639	+				-0.1
2,980,640	-				-0.3
2,980,704	-				-0.7
2,980,732	-				-2.2
2,980,732	-				-2.3
2,980,732	-				+2.5
2,980,732	-				-0.0
2,980,733	+				-0.4
2,980,733	+				-1.4
2,980,733	+				-0.0
2,980,733	+				-0.3
2,980,733	+				-0.8
2,980,733	+				+1.0
2,980,733	+				+0.3
2,980,733	+				+0.3
2,980,733	+				+0.0
2,980,733	+				-1.3
2,980,733	+				-0.4
2,980,734	-				+0.2
2,980,734	-				-0.0
2,980,734	-				-0.7
2,980,734	-				+1.0
2,980,734	-				+0.3
2,980,734	-				+0.5
2,980,734	-				+0.8
2,980,734	-				+0.4
2,980,734	-				-0.7
2,980,740	+				+1.5
2,980,740	+				-0.0
2,980,740	+				-0.3
2,980,740	+				+0.8
2,980,741	-				-0.1
2,980,741	-				+1.7
2,980,741	-				-0.0
2,980,750	-				+0.0
2,980,770	+				-1.3
2,980,771	-				-2.3
2,980,792	+				+0.7
2,980,793	-				-2.0
2,980,793	-				+0.6
2,980,822	+				-1.3
2,980,822	+				-1.1
2,980,822	+				-1.4
2,980,823	-				-0.4
2,980,823	-				+0.7
2,980,823	-				-0.3
2,980,823	-				-0.6
2,980,972	+				-1.8
2,981,063	+				+0.3
2,981,063	+				-0.2
2,981,063	+				+0.3
2,981,064	-				+0.9
2,981,064	-				-0.4
2,981,064	-				+1.7
2,981,172	+				+0.8
2,981,173	-				-0.2
2,981,173	-				-1.5
2,981,173	-				-0.1
2,981,243	+				-2.2
2,981,244	-				-0.5
2,981,244	-				-1.1
2,981,253	+				-2.0
2,981,253	+				-1.0
2,981,253	+				+0.7
2,981,253	+				+1.0
2,981,254	-				+0.1
2,981,254	-				-0.2
2,981,254	-				+0.0
2,981,254	-				+0.5
2,981,254	-				-0.9
2,981,254	-				+1.2
2,981,254	-				+1.0
2,981,254	-				+1.0