Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS11010

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,426,689	+		PFLU_RS11000	0.54	-2.4
2,426,696	-		PFLU_RS11000	0.55	+1.1
2,426,917	+				+0.8
2,426,917	+				-0.1
2,426,918	-				+1.4
2,426,918	-				-0.1
2,426,953	+				-0.1
2,426,954	-				+1.4
2,426,954	-				+1.1
2,426,954	-				-0.2
2,426,973	+				-3.7
2,426,974	-				+0.4
2,426,987	+				+1.7
2,426,988	-				-1.2
2,427,034	-		PFLU_RS11005	0.12	-0.5
2,427,122	-		PFLU_RS11005	0.25	-0.6
2,427,189	+		PFLU_RS11005	0.35	+0.1
2,427,190	-		PFLU_RS11005	0.35	-1.2
2,427,190	-		PFLU_RS11005	0.35	-2.5
2,427,281	+		PFLU_RS11005	0.49	-0.2
2,427,281	+		PFLU_RS11005	0.49	+0.4
2,427,381	+		PFLU_RS11005	0.64	+0.3
2,427,382	-		PFLU_RS11005	0.65	-0.8
2,427,382	-		PFLU_RS11005	0.65	+1.1
2,427,382	-		PFLU_RS11005	0.65	-0.2
2,427,383	+		PFLU_RS11005	0.65	+0.3
2,427,383	+		PFLU_RS11005	0.65	-0.1
2,427,383	+		PFLU_RS11005	0.65	+0.1
2,427,417	+		PFLU_RS11005	0.70	-0.2
2,427,418	-		PFLU_RS11005	0.70	+0.3
2,427,418	-		PFLU_RS11005	0.70	-0.2
2,427,418	-		PFLU_RS11005	0.70	+0.6
2,427,421	+		PFLU_RS11005	0.70	-0.9
2,427,433	-		PFLU_RS11005	0.72	-0.2
2,427,726	+				+1.1
2,427,766	-				+0.8
2,427,828	+				-0.6
2,427,849	-				-0.4
2,427,898	+				-1.0
2,427,898	+				-0.0
2,427,899	-				+0.4
2,428,098	+		PFLU_RS11010	0.17	+0.6
2,428,099	-		PFLU_RS11010	0.17	+0.7
2,428,302	+		PFLU_RS11010	0.24	+0.4
2,428,303	-		PFLU_RS11010	0.24	-0.3
2,428,303	-		PFLU_RS11010	0.24	+0.7
2,428,344	+		PFLU_RS11010	0.26	+1.3
2,428,429	+		PFLU_RS11010	0.29	+0.4
2,428,466	+		PFLU_RS11010	0.30	-0.5
2,428,467	-		PFLU_RS11010	0.30	+0.4
2,428,482	+		PFLU_RS11010	0.31	-0.4
2,428,496	+		PFLU_RS11010	0.31	+1.4
2,428,497	-		PFLU_RS11010	0.31	+0.2
2,428,541	+		PFLU_RS11010	0.33	+0.1
2,428,541	+		PFLU_RS11010	0.33	+0.8
2,428,541	+		PFLU_RS11010	0.33	-2.9
2,428,541	+		PFLU_RS11010	0.33	-2.7
2,428,541	+		PFLU_RS11010	0.33	+0.1
2,428,541	+		PFLU_RS11010	0.33	-0.3
2,428,541	+		PFLU_RS11010	0.33	+0.5
2,428,541	+		PFLU_RS11010	0.33	-1.2
2,428,541	+		PFLU_RS11010	0.33	+0.1
2,428,542	-		PFLU_RS11010	0.33	+0.8
2,428,542	-		PFLU_RS11010	0.33	+0.4
2,428,578	+		PFLU_RS11010	0.34	+0.8
2,428,578	+		PFLU_RS11010	0.34	+0.6
2,428,579	-		PFLU_RS11010	0.34	-0.5
2,428,579	-		PFLU_RS11010	0.34	-2.5
2,428,579	-		PFLU_RS11010	0.34	+0.5
2,428,677	+		PFLU_RS11010	0.38	-1.6
2,428,678	-		PFLU_RS11010	0.38	+0.1
2,428,678	-		PFLU_RS11010	0.38	-1.0
2,428,678	-		PFLU_RS11010	0.38	-0.0
2,428,678	-		PFLU_RS11010	0.38	+0.2
2,428,738	-		PFLU_RS11010	0.40	-0.4
2,429,075	+		PFLU_RS11010	0.52	+0.4
2,429,152	+		PFLU_RS11010	0.55	-0.5
2,429,152	+		PFLU_RS11010	0.55	-0.7
2,429,153	-		PFLU_RS11010	0.55	+0.2
2,429,153	-		PFLU_RS11010	0.55	-0.4
2,429,254	+		PFLU_RS11010	0.59	-2.0
2,429,255	-		PFLU_RS11010	0.59	-2.0
2,429,394	+		PFLU_RS11010	0.64	+0.3
2,429,395	-		PFLU_RS11010	0.64	+1.1
2,429,435	+		PFLU_RS11010	0.65	-0.3
2,429,518	-		PFLU_RS11010	0.68	+0.2
2,429,559	+		PFLU_RS11010	0.70	-0.1
2,429,559	+		PFLU_RS11010	0.70	+1.8
2,429,559	+		PFLU_RS11010	0.70	+1.4
2,429,559	+		PFLU_RS11010	0.70	+0.4
2,429,559	+		PFLU_RS11010	0.70	-1.0
2,429,560	-		PFLU_RS11010	0.70	+0.3
2,429,560	-		PFLU_RS11010	0.70	+0.4
2,429,560	-		PFLU_RS11010	0.70	+0.6
2,429,620	-		PFLU_RS11010	0.72	+0.6
2,429,706	+		PFLU_RS11010	0.75	-0.4
2,429,706	+		PFLU_RS11010	0.75	-1.4
2,429,706	+		PFLU_RS11010	0.75	+0.4
2,429,764	+		PFLU_RS11010	0.77	+0.5
2,429,800	-		PFLU_RS11010	0.78	-0.1
2,429,850	+		PFLU_RS11010	0.80	-0.2
2,429,851	-		PFLU_RS11010	0.80	-0.2
2,429,851	-		PFLU_RS11010	0.80	-0.9
2,429,851	-		PFLU_RS11010	0.80	-0.7
2,429,990	+		PFLU_RS11010	0.85	+1.0
2,429,990	+		PFLU_RS11010	0.85	+0.9
2,429,990	+		PFLU_RS11010	0.85	-1.7
2,429,991	-		PFLU_RS11010	0.85	-1.7
2,430,284	+				+0.4
2,430,467	-				-1.7
2,430,523	+		PFLU_RS11015	0.15	+0.2
2,430,524	-		PFLU_RS11015	0.15	-1.1
2,430,544	-		PFLU_RS11015	0.18	+0.6
2,430,578	+		PFLU_RS11015	0.23	+0.0
2,430,579	-		PFLU_RS11015	0.23	+0.3
2,430,721	+		PFLU_RS11015	0.43	+1.6
2,430,721	+		PFLU_RS11015	0.43	+1.9
2,430,721	+		PFLU_RS11015	0.43	+1.6
2,430,721	+		PFLU_RS11015	0.43	+0.7
2,430,722	-		PFLU_RS11015	0.43	+0.9
2,430,722	-		PFLU_RS11015	0.43	-1.7
2,430,722	-		PFLU_RS11015	0.43	+0.0
2,431,010	+		PFLU_RS11015	0.85	-0.1
2,431,130	+		PFLU_RS31540	0.56	+0.2
2,431,130	+		PFLU_RS31540	0.56	+0.7
2,431,167	-				+0.5
2,431,181	+				+0.4
2,431,181	+				-0.2
2,431,182	-				+0.7
2,431,182	-				-0.4
2,431,182	-				-0.3
2,431,183	+				+0.2
2,431,183	+				-0.7
2,431,183	+				+0.9
2,431,184	-				-2.2
2,431,184	-				-2.1
2,431,201	+				-1.4
2,431,217	+				+0.9
2,431,218	-				-0.9
2,431,218	-				-3.4
2,431,222	+				-1.9
2,431,246	+				-1.4
2,431,246	+				+2.2
2,431,247	-				-2.0
2,431,247	-				+1.1
2,431,250	+				-1.5
2,431,269	+				-0.7
2,431,269	+				-0.4
2,431,270	-				+0.3
2,431,270	-				-0.0
2,431,310	-				-0.9