Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10485

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,310,543	-		PFLU_RS10475	0.32	+0.3
2,310,704	+		PFLU_RS10475	0.47	-1.9
2,310,704	+		PFLU_RS10475	0.47	+0.5
2,310,704	+		PFLU_RS10475	0.47	+0.4
2,310,705	-		PFLU_RS10475	0.48	-2.9
2,310,705	-		PFLU_RS10475	0.48	+0.2
2,310,992	+		PFLU_RS10475	0.74	-0.0
2,310,992	+		PFLU_RS10475	0.74	+0.2
2,310,992	+		PFLU_RS10475	0.74	+0.2
2,310,993	-		PFLU_RS10475	0.75	+0.7
2,310,993	-		PFLU_RS10475	0.75	-0.0
2,310,993	-		PFLU_RS10475	0.75	-0.0
2,310,993	-		PFLU_RS10475	0.75	+0.6
2,311,119	-		PFLU_RS10475	0.86	-0.8
2,311,119	-		PFLU_RS10475	0.86	-0.1
2,311,119	-		PFLU_RS10475	0.86	+0.8
2,311,268	+				-1.5
2,311,269	-				+0.4
2,311,363	+		PFLU_RS10480	0.52	+0.3
2,311,363	+		PFLU_RS10480	0.52	-0.1
2,311,363	+		PFLU_RS10480	0.52	-0.3
2,311,363	+		PFLU_RS10480	0.52	+0.8
2,311,363	+		PFLU_RS10480	0.52	-1.0
2,311,363	+		PFLU_RS10480	0.52	+1.5
2,311,364	-		PFLU_RS10480	0.53	-2.5
2,311,364	-		PFLU_RS10480	0.53	-1.7
2,311,364	-		PFLU_RS10480	0.53	-0.2
2,311,364	-		PFLU_RS10480	0.53	+0.9
2,311,364	-		PFLU_RS10480	0.53	+1.2
2,311,364	-		PFLU_RS10480	0.53	+0.9
2,311,364	-		PFLU_RS10480	0.53	+2.0
2,311,364	-		PFLU_RS10480	0.53	+0.3
2,311,364	-		PFLU_RS10480	0.53	-1.5
2,311,364	-		PFLU_RS10480	0.53	-1.0
2,311,364	-		PFLU_RS10480	0.53	-1.0
2,311,364	-		PFLU_RS10480	0.53	-1.1
2,311,364	-		PFLU_RS10480	0.53	-1.8
2,311,367	+		PFLU_RS10480	0.55	+1.5
2,311,368	-		PFLU_RS10480	0.55	-1.1
2,311,368	-		PFLU_RS10480	0.55	-0.5
2,311,449	+				-0.9
2,311,450	-				-0.1
2,311,480	+				+0.7
2,311,680	+		PFLU_RS10485	0.71	+0.5
2,311,696	+		PFLU_RS10485	0.79	+0.1
2,311,696	+		PFLU_RS10485	0.79	+0.9
2,311,696	+		PFLU_RS10485	0.79	-1.3
2,311,696	+		PFLU_RS10485	0.79	+0.3
2,311,696	+		PFLU_RS10485	0.79	+1.5
2,311,696	+		PFLU_RS10485	0.79	+2.3
2,311,696	+		PFLU_RS10485	0.79	-0.3
2,311,697	-		PFLU_RS10485	0.80	+0.0
2,311,697	-		PFLU_RS10485	0.80	-0.3
2,311,697	-		PFLU_RS10485	0.80	-0.0
2,311,697	-		PFLU_RS10485	0.80	-1.3
2,311,784	+				-0.5
2,311,784	+				-0.4
2,311,784	+				-0.8
2,311,784	+				-0.8
2,311,784	+				+0.9
2,311,784	+				-1.9
2,311,785	-				+0.5
2,311,785	-				+0.3
2,311,785	-				+0.3
2,311,785	-				+1.5
2,311,796	+				+0.1
2,311,796	+				+0.6
2,311,797	-				-0.9
2,311,797	-				+0.0
2,311,797	-				-0.3
2,311,797	-				-0.3
2,311,797	-				+0.5
2,311,829	+				-1.3
2,311,829	+				-0.5
2,311,829	+				+0.5
2,311,829	+				+0.7
2,311,829	+				-1.7
2,311,830	-				+0.0
2,311,830	-				+0.5
2,311,830	-				+1.1
2,311,896	-				-1.9
2,311,907	+				-0.8
2,311,908	-				+0.5
2,311,908	-				-0.7
2,311,908	-				+0.8
2,311,908	-				+0.9
2,311,908	-				+0.2
2,311,908	-				+0.6
2,311,908	-				-0.0
2,311,908	-				-0.1
2,311,908	-				+0.0
2,311,987	+				-0.2
2,311,987	+				+0.7
2,311,990	+				+0.0
2,311,991	-				+0.6
2,312,008	+		PFLU_RS10490	0.10	+0.4
2,312,009	-		PFLU_RS10490	0.11	+0.5
2,312,009	-		PFLU_RS10490	0.11	-0.1
2,312,053	+		PFLU_RS10490	0.23	-0.4
2,312,053	+		PFLU_RS10490	0.23	+0.1
2,312,053	+		PFLU_RS10490	0.23	+0.2
2,312,053	+		PFLU_RS10490	0.23	-1.4
2,312,053	+		PFLU_RS10490	0.23	-1.5
2,312,053	+		PFLU_RS10490	0.23	+2.0
2,312,053	+		PFLU_RS10490	0.23	+0.5
2,312,053	+		PFLU_RS10490	0.23	+0.1
2,312,054	-		PFLU_RS10490	0.23	-0.1
2,312,054	-		PFLU_RS10490	0.23	+0.5
2,312,054	-		PFLU_RS10490	0.23	-0.7
2,312,054	-		PFLU_RS10490	0.23	-2.3
2,312,054	-		PFLU_RS10490	0.23	-0.6
2,312,054	-		PFLU_RS10490	0.23	-2.5
2,312,054	-		PFLU_RS10490	0.23	-0.4
2,312,054	-		PFLU_RS10490	0.23	-0.1
2,312,071	+		PFLU_RS10490	0.28	-1.1
2,312,071	+		PFLU_RS10490	0.28	+0.4
2,312,071	+		PFLU_RS10490	0.28	-0.7
2,312,071	+		PFLU_RS10490	0.28	+0.7
2,312,071	+		PFLU_RS10490	0.28	+0.1
2,312,071	+		PFLU_RS10490	0.28	+1.1
2,312,071	+		PFLU_RS10490	0.28	+1.7
2,312,071	+		PFLU_RS10490	0.28	+1.0
2,312,071	+		PFLU_RS10490	0.28	+0.1
2,312,071	+		PFLU_RS10490	0.28	-1.1
2,312,071	+		PFLU_RS10490	0.28	+0.6
2,312,071	+		PFLU_RS10490	0.28	+0.8
2,312,071	+		PFLU_RS10490	0.28	-1.8
2,312,072	-		PFLU_RS10490	0.29	-0.4
2,312,072	-		PFLU_RS10490	0.29	-1.4
2,312,072	-		PFLU_RS10490	0.29	+1.9
2,312,072	-		PFLU_RS10490	0.29	-1.1
2,312,072	-		PFLU_RS10490	0.29	-1.2
2,312,072	-		PFLU_RS10490	0.29	+0.1
2,312,092	+		PFLU_RS10490	0.34	-0.2
2,312,092	+		PFLU_RS10490	0.34	-1.7
2,312,093	-		PFLU_RS10490	0.34	-0.7
2,312,093	-		PFLU_RS10490	0.34	-1.1
2,312,116	+		PFLU_RS10490	0.41	+0.2
2,312,116	+		PFLU_RS10490	0.41	+0.2
2,312,116	+		PFLU_RS10490	0.41	+0.7
2,312,117	-		PFLU_RS10490	0.41	+0.5
2,312,117	-		PFLU_RS10490	0.41	+0.0
2,312,117	-		PFLU_RS10490	0.41	-0.5
2,312,137	+		PFLU_RS10490	0.47	-0.5
2,312,137	+		PFLU_RS10490	0.47	+0.2
2,312,137	+		PFLU_RS10490	0.47	+0.6
2,312,137	+		PFLU_RS10490	0.47	+0.6
2,312,137	+		PFLU_RS10490	0.47	-0.3
2,312,137	+		PFLU_RS10490	0.47	+2.8
2,312,137	+		PFLU_RS10490	0.47	+2.0
2,312,137	+		PFLU_RS10490	0.47	+0.3
2,312,137	+		PFLU_RS10490	0.47	+0.9
2,312,137	+		PFLU_RS10490	0.47	+0.5
2,312,137	+		PFLU_RS10490	0.47	-0.5
2,312,138	-		PFLU_RS10490	0.47	+0.0
2,312,138	-		PFLU_RS10490	0.47	-0.6
2,312,138	-		PFLU_RS10490	0.47	-0.8
2,312,138	-		PFLU_RS10490	0.47	-2.0
2,312,138	-		PFLU_RS10490	0.47	+1.5
2,312,138	-		PFLU_RS10490	0.47	+0.3
2,312,155	+		PFLU_RS10490	0.52	-1.5
2,312,155	+		PFLU_RS10490	0.52	+1.0
2,312,155	+		PFLU_RS10490	0.52	+0.1
2,312,155	+		PFLU_RS10490	0.52	+0.2
2,312,155	+		PFLU_RS10490	0.52	-0.1
2,312,156	-		PFLU_RS10490	0.52	+0.3
2,312,156	-		PFLU_RS10490	0.52	+0.5
2,312,156	-		PFLU_RS10490	0.52	+0.1
2,312,156	-		PFLU_RS10490	0.52	-0.7
2,312,156	-		PFLU_RS10490	0.52	-0.1
2,312,208	+		PFLU_RS10490	0.67	-1.0
2,312,309	+				-0.4
2,312,309	+				-0.1
2,312,309	+				-0.9
2,312,309	+				-1.9
2,312,310	-				-0.5
2,312,310	-				-2.0
2,312,310	-				+0.3
2,312,356	-				-0.9
2,312,356	-				-0.4
2,312,356	-				+0.5
2,312,363	-				-1.1
2,312,372	+				-0.0
2,312,372	+				+0.5
2,312,372	+				-1.0
2,312,372	+				-0.3
2,312,402	+				-1.2
2,312,403	-				+0.1
2,312,403	-				+0.5
2,312,403	-				-0.8
2,312,403	-				+0.8
2,312,403	-				-1.9
2,312,431	+				+0.9
2,312,432	-				-1.4
2,312,432	-				+0.9
2,312,432	-				-0.0
2,312,442	+				-0.8
2,312,442	+				+0.7
2,312,442	+				+0.7
2,312,442	+				-0.5
2,312,442	+				+1.1
2,312,476	+				-0.6
2,312,476	+				+0.5
2,312,477	-				+1.0
2,312,541	-				-0.0
2,312,561	+				-0.1
2,312,595	+		PFLU_RS10495	0.14	+0.2
2,312,595	+		PFLU_RS10495	0.14	-0.1
2,312,595	+		PFLU_RS10495	0.14	-1.3
2,312,595	+		PFLU_RS10495	0.14	-0.2
2,312,596	-		PFLU_RS10495	0.14	+0.0
2,312,596	-		PFLU_RS10495	0.14	-1.3
2,312,598	+		PFLU_RS10495	0.14	-0.5
2,312,598	+		PFLU_RS10495	0.14	-2.1
2,312,598	+		PFLU_RS10495	0.14	-1.7
2,312,598	+		PFLU_RS10495	0.14	+0.7
2,312,598	+		PFLU_RS10495	0.14	+0.5
2,312,598	+		PFLU_RS10495	0.14	+0.2
2,312,598	+		PFLU_RS10495	0.14	+0.6
2,312,599	-		PFLU_RS10495	0.14	+0.9
2,312,599	-		PFLU_RS10495	0.14	+1.1
2,312,599	-		PFLU_RS10495	0.14	+0.1
2,312,599	-		PFLU_RS10495	0.14	-2.5
2,312,599	-		PFLU_RS10495	0.14	-0.1
2,312,599	-		PFLU_RS10495	0.14	+1.0
2,312,599	-		PFLU_RS10495	0.14	-1.5
2,312,600	+		PFLU_RS10495	0.15	-2.3
2,312,600	+		PFLU_RS10495	0.15	-0.4
2,312,600	+		PFLU_RS10495	0.15	-0.6
2,312,600	+		PFLU_RS10495	0.15	+0.5
2,312,600	+		PFLU_RS10495	0.15	+0.2
2,312,600	+		PFLU_RS10495	0.15	+0.9
2,312,600	+		PFLU_RS10495	0.15	-0.3
2,312,600	+		PFLU_RS10495	0.15	-0.3
2,312,601	-		PFLU_RS10495	0.15	-1.0
2,312,601	-		PFLU_RS10495	0.15	+1.3
2,312,707	+		PFLU_RS10495	0.28	-1.7
2,312,708	-		PFLU_RS10495	0.28	+0.7