Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS09640

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,127,935	-				+1.0
2,127,957	+				-2.3
2,128,321	+		PFLU_RS09635	0.42	+0.9
2,128,322	-		PFLU_RS09635	0.42	-2.0
2,128,322	-		PFLU_RS09635	0.42	-2.3
2,128,505	+		PFLU_RS09635	0.65	+0.5
2,128,506	-		PFLU_RS09635	0.65	-0.2
2,128,506	-		PFLU_RS09635	0.65	+0.5
2,128,563	+		PFLU_RS09635	0.72	+0.0
2,128,705	+				+0.7
2,128,754	+				-3.2
2,128,754	+				+0.8
2,128,755	-				-0.6
2,128,841	-				-0.9
2,128,854	+				-1.8
2,128,855	-				-1.5
2,128,855	-				+0.4
2,128,874	+				-0.2
2,128,874	+				-0.6
2,128,874	+				-0.3
2,128,874	+				+1.5
2,128,874	+				+0.3
2,128,874	+				-0.0
2,128,874	+				-1.0
2,128,874	+				+0.4
2,128,874	+				-0.1
2,128,874	+				+1.1
2,128,874	+				-1.6
2,128,875	-				+0.2
2,128,875	-				-2.0
2,128,875	-				+0.1
2,128,875	-				+0.5
2,128,875	-				-0.9
2,128,875	-				+0.4
2,128,875	-				+1.4
2,128,875	-				-0.2
2,128,875	-				-1.5
2,128,875	-				-1.4
2,128,878	+				-0.5
2,128,878	+				-0.1
2,128,878	+				+0.8
2,128,878	+				+0.7
2,128,878	+				-0.7
2,128,878	+				-1.0
2,128,878	+				+2.2
2,128,878	+				-0.6
2,128,878	+				-0.9
2,128,879	-				-0.7
2,128,879	-				-1.4
2,128,879	-				+0.6
2,128,879	-				-2.1
2,128,879	-				-0.5
2,128,879	-				+0.4
2,128,879	-				+0.0
2,128,879	-				-0.6
2,128,879	-				+1.8
2,129,135	+		PFLU_RS09640	0.18	+0.2
2,129,136	-		PFLU_RS09640	0.18	-0.7
2,129,136	-		PFLU_RS09640	0.18	-0.8
2,129,136	-		PFLU_RS09640	0.18	+1.5
2,129,136	-		PFLU_RS09640	0.18	-0.4
2,129,136	-		PFLU_RS09640	0.18	-0.5
2,129,136	-		PFLU_RS09640	0.18	-2.8
2,129,136	-		PFLU_RS09640	0.18	+0.8
2,129,267	+		PFLU_RS09640	0.27	-0.5
2,129,267	+		PFLU_RS09640	0.27	-0.8
2,129,267	+		PFLU_RS09640	0.27	+0.8
2,129,267	+		PFLU_RS09640	0.27	-0.3
2,129,267	+		PFLU_RS09640	0.27	-2.3
2,129,267	+		PFLU_RS09640	0.27	+0.3
2,129,267	+		PFLU_RS09640	0.27	+0.3
2,129,267	+		PFLU_RS09640	0.27	+1.5
2,129,267	+		PFLU_RS09640	0.27	-1.6
2,129,267	+		PFLU_RS09640	0.27	-2.5
2,129,267	+		PFLU_RS09640	0.27	+0.2
2,129,267	+		PFLU_RS09640	0.27	-1.6
2,129,267	+		PFLU_RS09640	0.27	-1.5
2,129,267	+		PFLU_RS09640	0.27	-0.2
2,129,267	+		PFLU_RS09640	0.27	-0.2
2,129,267	+		PFLU_RS09640	0.27	-0.5
2,129,267	+		PFLU_RS09640	0.27	+0.4
2,129,268	-		PFLU_RS09640	0.27	-1.1
2,129,268	-		PFLU_RS09640	0.27	-1.2
2,129,268	-		PFLU_RS09640	0.27	+0.8
2,129,268	-		PFLU_RS09640	0.27	-2.9
2,129,268	-		PFLU_RS09640	0.27	+0.6
2,129,268	-		PFLU_RS09640	0.27	+0.2
2,129,268	-		PFLU_RS09640	0.27	+0.9
2,129,268	-		PFLU_RS09640	0.27	-1.1
2,129,268	-		PFLU_RS09640	0.27	+0.3
2,129,268	-		PFLU_RS09640	0.27	-0.8
2,129,268	-		PFLU_RS09640	0.27	-0.8
2,129,268	-		PFLU_RS09640	0.27	-0.2
2,129,268	-		PFLU_RS09640	0.27	-1.2
2,129,307	+		PFLU_RS09640	0.30	+1.3
2,129,307	+		PFLU_RS09640	0.30	+0.5
2,129,308	-		PFLU_RS09640	0.30	-0.5
2,129,339	+		PFLU_RS09640	0.32	+0.7
2,129,339	+		PFLU_RS09640	0.32	+1.9
2,129,339	+		PFLU_RS09640	0.32	-1.7
2,129,340	-		PFLU_RS09640	0.32	-2.4
2,129,340	-		PFLU_RS09640	0.32	-1.3
2,129,340	-		PFLU_RS09640	0.32	+0.3
2,129,340	-		PFLU_RS09640	0.32	-1.7
2,129,340	-		PFLU_RS09640	0.32	-0.0
2,129,340	-		PFLU_RS09640	0.32	+0.3
2,129,352	+		PFLU_RS09640	0.33	+0.5
2,129,353	-		PFLU_RS09640	0.33	+0.1
2,129,353	-		PFLU_RS09640	0.33	+0.0
2,129,353	-		PFLU_RS09640	0.33	+0.3
2,129,353	-		PFLU_RS09640	0.33	+1.0
2,129,375	+		PFLU_RS09640	0.34	-0.5
2,129,375	+		PFLU_RS09640	0.34	-0.5
2,129,375	+		PFLU_RS09640	0.34	-0.0
2,129,375	+		PFLU_RS09640	0.34	+0.9
2,129,376	-		PFLU_RS09640	0.34	+0.3
2,129,376	-		PFLU_RS09640	0.34	+1.3
2,129,438	+		PFLU_RS09640	0.39	+0.7
2,129,438	+		PFLU_RS09640	0.39	-1.2
2,129,438	+		PFLU_RS09640	0.39	-0.2
2,129,438	+		PFLU_RS09640	0.39	-1.1
2,129,439	-		PFLU_RS09640	0.39	-0.2
2,129,439	-		PFLU_RS09640	0.39	-0.5
2,129,439	-		PFLU_RS09640	0.39	-0.9
2,129,439	-		PFLU_RS09640	0.39	-0.0
2,129,439	-		PFLU_RS09640	0.39	-0.0
2,129,439	-		PFLU_RS09640	0.39	-0.8
2,129,526	-		PFLU_RS09640	0.45	-0.1
2,129,599	+		PFLU_RS09640	0.50	-0.5
2,129,599	+		PFLU_RS09640	0.50	-0.0
2,129,673	-		PFLU_RS09640	0.55	-0.8
2,129,717	+		PFLU_RS09640	0.58	+0.8
2,129,747	+		PFLU_RS09640	0.60	+1.0
2,129,747	+		PFLU_RS09640	0.60	+1.5
2,129,747	+		PFLU_RS09640	0.60	+0.9
2,129,747	+		PFLU_RS09640	0.60	+0.4
2,129,747	+		PFLU_RS09640	0.60	+0.9
2,129,747	+		PFLU_RS09640	0.60	-0.0
2,129,748	-		PFLU_RS09640	0.60	-0.6
2,129,748	-		PFLU_RS09640	0.60	-0.0
2,129,748	-		PFLU_RS09640	0.60	-0.6
2,129,748	-		PFLU_RS09640	0.60	+0.2
2,129,748	-		PFLU_RS09640	0.60	+1.0
2,129,748	-		PFLU_RS09640	0.60	-0.3
2,129,748	-		PFLU_RS09640	0.60	-1.0
2,129,775	-		PFLU_RS09640	0.62	-0.9
2,129,775	-		PFLU_RS09640	0.62	+0.3
2,129,775	-		PFLU_RS09640	0.62	+0.7
2,129,777	+		PFLU_RS09640	0.62	+0.3
2,129,777	+		PFLU_RS09640	0.62	+1.2
2,129,777	+		PFLU_RS09640	0.62	-0.4
2,129,778	-		PFLU_RS09640	0.62	+0.7
2,129,778	-		PFLU_RS09640	0.62	+0.7
2,129,778	-		PFLU_RS09640	0.62	-0.4
2,129,778	-		PFLU_RS09640	0.62	+0.2
2,129,778	-		PFLU_RS09640	0.62	-0.7
2,129,850	-		PFLU_RS09640	0.67	-0.2
2,130,020	-		PFLU_RS09640	0.78	+0.7
2,130,038	+		PFLU_RS09640	0.79	+0.2
2,130,038	+		PFLU_RS09640	0.79	-1.8
2,130,039	-		PFLU_RS09640	0.79	+1.0
2,130,039	-		PFLU_RS09640	0.79	+0.6
2,130,128	+		PFLU_RS09640	0.86	-3.7
2,130,149	+		PFLU_RS09640	0.87	+0.9
2,130,217	+				-0.5
2,130,275	+				-0.4
2,130,300	+				-1.0
2,130,300	+				-2.3
2,130,300	+				+0.2
2,130,300	+				+0.5
2,130,300	+				-0.5
2,130,301	-				+0.1
2,130,301	-				+0.1
2,130,301	-				+1.2
2,130,301	-				-1.2
2,130,301	-				-0.6
2,130,301	-				+0.2
2,130,338	+				-0.0
2,130,381	-				-0.0
2,130,678	+		PFLU_RS30580	0.45	+0.0
2,130,678	+		PFLU_RS30580	0.45	-0.6
2,130,679	-		PFLU_RS30580	0.45	+2.1
2,130,679	-		PFLU_RS30580	0.45	+1.3
2,130,679	-		PFLU_RS30580	0.45	+0.1
2,130,679	-		PFLU_RS30580	0.45	-0.0
2,130,679	-		PFLU_RS30580	0.45	+1.4
2,130,679	-		PFLU_RS30580	0.45	-1.3
2,130,737	+		PFLU_RS30580	0.54	+0.1
2,130,738	-		PFLU_RS30580	0.54	+0.8
2,130,783	+		PFLU_RS30580	0.60	-0.1
2,130,783	+		PFLU_RS30580	0.60	+0.1
2,130,783	+		PFLU_RS30580	0.60	-2.2
2,131,065	+				-0.1
2,131,065	+				+0.6
2,131,065	+				+1.0
2,131,066	-				-0.5
2,131,066	-				-1.1
2,131,066	-				-0.9
2,131,098	+				+0.1
2,131,155	+				+0.6
2,131,155	+				+1.0
2,131,155	+				+0.0
2,131,155	+				-0.7
2,131,156	-				+0.1
2,131,156	-				-1.7
2,131,156	-				+0.9
2,131,156	-				-2.1
2,131,156	-				-1.7
2,131,156	-				-0.2
2,131,156	-				-1.0
2,131,156	-				+0.9
2,131,156	-				+0.3
2,131,157	+				+1.5
2,131,157	+				+0.2
2,131,158	-				+0.5
2,131,158	-				-1.6
2,131,158	-				-0.2
2,131,181	+				+0.2
2,131,230	+				+1.8
2,131,231	-				+0.4
2,131,231	-				-1.0
2,131,231	-				+1.5
2,131,334	+		PFLU_RS09650	0.23	+1.4
2,131,334	+		PFLU_RS09650	0.23	+0.5
2,131,334	+		PFLU_RS09650	0.23	+0.8
2,131,334	+		PFLU_RS09650	0.23	+0.4
2,131,334	+		PFLU_RS09650	0.23	-1.7
2,131,335	-		PFLU_RS09650	0.23	-1.3
2,131,335	-		PFLU_RS09650	0.23	-0.2