Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07275

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,620,411	+		PFLU_RS07265	0.77	+2.8
1,620,417	+		PFLU_RS07265	0.78	+0.3
1,620,417	+		PFLU_RS07265	0.78	+0.9
1,620,417	+		PFLU_RS07265	0.78	-2.6
1,620,417	+		PFLU_RS07265	0.78	+0.7
1,620,417	+		PFLU_RS07265	0.78	+0.5
1,620,417	+		PFLU_RS07265	0.78	+1.9
1,620,417	+		PFLU_RS07265	0.78	-0.7
1,620,417	+		PFLU_RS07265	0.78	+1.4
1,620,417	+		PFLU_RS07265	0.78	+0.2
1,620,417	+		PFLU_RS07265	0.78	+1.3
1,620,417	+		PFLU_RS07265	0.78	+2.9
1,620,417	+		PFLU_RS07265	0.78	-0.8
1,620,418	-		PFLU_RS07265	0.78	+0.4
1,620,418	-		PFLU_RS07265	0.78	-1.8
1,620,418	-		PFLU_RS07265	0.78	-0.5
1,620,418	-		PFLU_RS07265	0.78	-1.7
1,620,418	-		PFLU_RS07265	0.78	+0.2
1,620,418	-		PFLU_RS07265	0.78	-0.4
1,620,418	-		PFLU_RS07265	0.78	+0.6
1,620,418	-		PFLU_RS07265	0.78	+0.1
1,620,418	-		PFLU_RS07265	0.78	+0.6
1,620,418	-		PFLU_RS07265	0.78	+0.0
1,620,494	+				+0.2
1,620,495	-				+0.5
1,620,495	-				+0.7
1,620,533	+				-0.8
1,620,533	+				-0.6
1,620,533	+				+1.4
1,620,533	+				-0.2
1,620,533	+				+0.0
1,620,533	+				-0.6
1,620,534	-				-1.0
1,620,534	-				+0.6
1,620,534	-				-0.6
1,620,534	-				-0.4
1,620,534	-				+2.0
1,620,534	-				-1.3
1,620,534	-				-0.0
1,620,534	-				+0.7
1,620,534	-				-0.0
1,620,534	-				+0.3
1,620,534	-				-0.2
1,620,534	-				+0.0
1,620,534	-				-2.6
1,620,534	-				-0.9
1,620,534	-				+1.3
1,620,534	-				+2.1
1,620,534	-				-2.9
1,620,534	-				-1.4
1,620,652	-		PFLU_RS07270	0.21	+1.8
1,620,695	+		PFLU_RS07270	0.29	+1.0
1,620,695	+		PFLU_RS07270	0.29	+0.2
1,620,695	+		PFLU_RS07270	0.29	+0.7
1,620,695	+		PFLU_RS07270	0.29	-0.9
1,620,695	+		PFLU_RS07270	0.29	+1.3
1,620,695	+		PFLU_RS07270	0.29	-0.6
1,620,695	+		PFLU_RS07270	0.29	+1.8
1,620,696	-		PFLU_RS07270	0.29	-0.4
1,620,696	-		PFLU_RS07270	0.29	-0.8
1,620,696	-		PFLU_RS07270	0.29	-0.0
1,620,696	-		PFLU_RS07270	0.29	+3.0
1,620,791	+		PFLU_RS07270	0.46	+1.8
1,620,791	+		PFLU_RS07270	0.46	+0.8
1,620,791	+		PFLU_RS07270	0.46	+0.4
1,620,791	+		PFLU_RS07270	0.46	+0.7
1,620,791	+		PFLU_RS07270	0.46	+0.5
1,620,791	+		PFLU_RS07270	0.46	-0.3
1,620,792	-		PFLU_RS07270	0.46	+0.4
1,620,792	-		PFLU_RS07270	0.46	+1.4
1,620,792	-		PFLU_RS07270	0.46	+0.8
1,620,800	+		PFLU_RS07270	0.48	+0.2
1,620,800	+		PFLU_RS07270	0.48	+0.5
1,620,800	+		PFLU_RS07270	0.48	+1.0
1,620,800	+		PFLU_RS07270	0.48	+0.7
1,620,800	+		PFLU_RS07270	0.48	-1.1
1,620,800	+		PFLU_RS07270	0.48	-1.0
1,620,800	+		PFLU_RS07270	0.48	+1.1
1,620,801	-		PFLU_RS07270	0.48	-0.4
1,620,801	-		PFLU_RS07270	0.48	+1.3
1,620,801	-		PFLU_RS07270	0.48	+0.2
1,620,801	-		PFLU_RS07270	0.48	+0.1
1,620,801	-		PFLU_RS07270	0.48	+0.8
1,620,801	-		PFLU_RS07270	0.48	+1.8
1,620,801	-		PFLU_RS07270	0.48	+2.2
1,620,801	-		PFLU_RS07270	0.48	+0.2
1,620,801	-		PFLU_RS07270	0.48	+0.6
1,620,801	-		PFLU_RS07270	0.48	-2.9
1,620,841	+		PFLU_RS07270	0.55	-0.2
1,620,841	+		PFLU_RS07270	0.55	+0.9
1,621,056	+				+1.2
1,621,056	+				-0.7
1,621,057	-				-0.2
1,621,103	+				+1.0
1,621,104	-				-2.5
1,621,137	-				-0.9
1,621,180	+				-0.9
1,621,180	+				-0.9
1,621,200	-				-3.0
1,621,200	-				+0.5
1,621,200	-				+0.2
1,621,268	+				+0.6
1,621,268	+				+0.2
1,621,268	+				+0.1
1,621,269	-				-0.4
1,621,269	-				-0.9
1,621,269	-				-0.9
1,621,269	-				+0.1
1,621,269	-				-2.0
1,621,269	-				-1.9
1,621,298	-				-1.3
1,621,308	+				-2.6
1,621,308	+				+1.1
1,621,308	+				-2.1
1,621,308	+				-3.0
1,621,329	-				-1.1
1,621,380	+				-1.7
1,621,380	+				-0.8
1,621,681	+		PFLU_RS07275	0.36	-1.8
1,621,682	-		PFLU_RS07275	0.36	+0.8
1,621,684	+		PFLU_RS07275	0.36	-2.4
1,621,684	+		PFLU_RS07275	0.36	+2.8
1,621,684	+		PFLU_RS07275	0.36	-0.8
1,621,684	+		PFLU_RS07275	0.36	-2.8
1,621,684	+		PFLU_RS07275	0.36	-0.2
1,621,684	+		PFLU_RS07275	0.36	+1.3
1,621,684	+		PFLU_RS07275	0.36	-0.8
1,621,684	+		PFLU_RS07275	0.36	-1.9
1,621,685	-		PFLU_RS07275	0.36	+1.8
1,621,685	-		PFLU_RS07275	0.36	-1.2
1,621,711	+		PFLU_RS07275	0.39	-2.1
1,621,711	+		PFLU_RS07275	0.39	-0.8
1,621,712	-		PFLU_RS07275	0.39	-1.6
1,621,712	-		PFLU_RS07275	0.39	-1.0
1,621,762	+		PFLU_RS07275	0.45	-0.2
1,621,762	+		PFLU_RS07275	0.45	-0.7
1,621,762	+		PFLU_RS07275	0.45	-1.5
1,621,762	+		PFLU_RS07275	0.45	-0.8
1,621,763	-		PFLU_RS07275	0.45	-0.6
1,621,763	-		PFLU_RS07275	0.45	+0.2
1,621,763	-		PFLU_RS07275	0.45	-1.2
1,621,763	-		PFLU_RS07275	0.45	-0.2
1,621,764	+		PFLU_RS07275	0.45	-0.2
1,621,764	+		PFLU_RS07275	0.45	-1.0
1,621,764	+		PFLU_RS07275	0.45	-2.0
1,621,765	-		PFLU_RS07275	0.45	-1.2
1,621,916	-		PFLU_RS07275	0.63	+0.8
1,622,112	+		PFLU_RS07275	0.85	+0.6
1,622,184	-				-0.2
1,622,242	+				+1.8
1,622,242	+				-0.5
1,622,242	+				+0.9
1,622,242	+				+1.0
1,622,242	+				-0.2
1,622,242	+				-0.4
1,622,242	+				-0.8
1,622,243	-				-0.6
1,622,243	-				-2.2
1,622,243	-				-2.3
1,622,257	+				-1.6
1,622,258	-				-0.6
1,622,258	-				+0.8
1,622,300	+				-0.2
1,622,300	+				-1.6
1,622,301	-				-2.0
1,622,346	+				-2.4
1,622,347	-				-1.2
1,622,347	-				+0.2
1,622,370	+				-1.5
1,622,370	+				-0.2
1,622,490	+		PFLU_RS07280	0.20	+1.0
1,622,490	+		PFLU_RS07280	0.20	+0.4
1,622,490	+		PFLU_RS07280	0.20	-1.0
1,622,490	+		PFLU_RS07280	0.20	-2.7
1,622,490	+		PFLU_RS07280	0.20	-1.3
1,622,490	+		PFLU_RS07280	0.20	-0.9
1,622,491	-		PFLU_RS07280	0.21	+0.4
1,622,491	-		PFLU_RS07280	0.21	-0.8
1,622,491	-		PFLU_RS07280	0.21	+0.2
1,622,491	-		PFLU_RS07280	0.21	-2.2
1,622,491	-		PFLU_RS07280	0.21	-0.2
1,622,491	-		PFLU_RS07280	0.21	-2.0
1,622,491	-		PFLU_RS07280	0.21	-0.0
1,622,491	-		PFLU_RS07280	0.21	-3.0
1,622,491	-		PFLU_RS07280	0.21	-1.6
1,622,491	-		PFLU_RS07280	0.21	-2.1
1,622,491	-		PFLU_RS07280	0.21	-0.8
1,622,491	-		PFLU_RS07280	0.21	-1.7
1,622,541	+		PFLU_RS07280	0.25	-1.1
1,622,541	+		PFLU_RS07280	0.25	+1.4
1,622,541	+		PFLU_RS07280	0.25	+0.5
1,622,541	+		PFLU_RS07280	0.25	-0.4
1,622,542	-		PFLU_RS07280	0.25	-1.3
1,622,746	+		PFLU_RS07280	0.43	+0.4
1,622,801	+		PFLU_RS07280	0.48	+0.8
1,622,801	+		PFLU_RS07280	0.48	-0.1
1,622,801	+		PFLU_RS07280	0.48	+0.2
1,622,802	-		PFLU_RS07280	0.48	-2.1
1,622,802	-		PFLU_RS07280	0.48	-1.7
1,622,802	-		PFLU_RS07280	0.48	-0.8
1,622,802	-		PFLU_RS07280	0.48	-1.0
1,622,802	-		PFLU_RS07280	0.48	-2.1
1,622,802	-		PFLU_RS07280	0.48	-1.7
1,622,802	-		PFLU_RS07280	0.48	-1.3
1,622,804	+		PFLU_RS07280	0.49	+0.8
1,622,804	+		PFLU_RS07280	0.49	-1.2
1,622,804	+		PFLU_RS07280	0.49	-0.6
1,622,804	+		PFLU_RS07280	0.49	-1.9
1,622,804	+		PFLU_RS07280	0.49	+0.2
1,622,804	+		PFLU_RS07280	0.49	-0.1
1,622,805	-		PFLU_RS07280	0.49	-1.4
1,622,805	-		PFLU_RS07280	0.49	-0.7
1,622,817	+		PFLU_RS07280	0.50	+0.1
1,622,817	+		PFLU_RS07280	0.50	-0.6
1,622,817	+		PFLU_RS07280	0.50	+1.0
1,622,817	+		PFLU_RS07280	0.50	+0.8
1,622,818	-		PFLU_RS07280	0.50	-1.2
1,622,818	-		PFLU_RS07280	0.50	-2.5
1,622,818	-		PFLU_RS07280	0.50	-0.9
1,622,818	-		PFLU_RS07280	0.50	-2.3
1,622,936	+		PFLU_RS07280	0.60	+0.9
1,622,936	+		PFLU_RS07280	0.60	+0.8
1,622,936	+		PFLU_RS07280	0.60	-0.2
1,622,937	-		PFLU_RS07280	0.60	-2.6
1,622,937	-		PFLU_RS07280	0.60	-1.4
1,622,982	+		PFLU_RS07280	0.65	-0.1
1,622,983	-		PFLU_RS07280	0.65	-3.2
1,623,110	-		PFLU_RS07280	0.76	-1.6
1,623,138	+		PFLU_RS07280	0.78	-0.5
1,623,138	+		PFLU_RS07280	0.78	-0.6
1,623,138	+		PFLU_RS07280	0.78	+0.1
1,623,138	+		PFLU_RS07280	0.78	+0.6
1,623,138	+		PFLU_RS07280	0.78	+0.8
1,623,138	+		PFLU_RS07280	0.78	+2.0
1,623,138	+		PFLU_RS07280	0.78	-0.2
1,623,138	+		PFLU_RS07280	0.78	-0.0
1,623,138	+		PFLU_RS07280	0.78	-0.3
1,623,139	-		PFLU_RS07280	0.79	-0.9
1,623,139	-		PFLU_RS07280	0.79	-2.0
1,623,141	+		PFLU_RS07280	0.79	+0.6
1,623,141	+		PFLU_RS07280	0.79	-0.4
1,623,141	+		PFLU_RS07280	0.79	+0.2
1,623,141	+		PFLU_RS07280	0.79	+0.5
1,623,141	+		PFLU_RS07280	0.79	+0.8
1,623,141	+		PFLU_RS07280	0.79	+0.5
1,623,141	+		PFLU_RS07280	0.79	-0.6
1,623,142	-		PFLU_RS07280	0.79	-2.4
1,623,142	-		PFLU_RS07280	0.79	-1.7
1,623,142	-		PFLU_RS07280	0.79	-0.9
1,623,142	-		PFLU_RS07280	0.79	-2.5
1,623,142	-		PFLU_RS07280	0.79	-2.8
1,623,142	-		PFLU_RS07280	0.79	-0.2
1,623,142	-		PFLU_RS07280	0.79	-0.1
1,623,142	-		PFLU_RS07280	0.79	-1.3
1,623,170	+		PFLU_RS07280	0.81	+0.3
1,623,170	+		PFLU_RS07280	0.81	-0.5
1,623,209	+		PFLU_RS07280	0.85	-0.8
1,623,209	+		PFLU_RS07280	0.85	+1.8
1,623,212	+		PFLU_RS07280	0.85	-0.3
1,623,212	+		PFLU_RS07280	0.85	-0.4
1,623,212	+		PFLU_RS07280	0.85	+0.3
1,623,213	-		PFLU_RS07280	0.85	-2.8
1,623,213	-		PFLU_RS07280	0.85	-1.4
1,623,213	-		PFLU_RS07280	0.85	-0.6
1,623,213	-		PFLU_RS07280	0.85	-2.3
1,623,213	-		PFLU_RS07280	0.85	-1.1