Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07245

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,614,571	+		PFLU_RS07240	0.27	+0.8
1,614,571	+		PFLU_RS07240	0.27	+1.3
1,614,572	-		PFLU_RS07240	0.27	-0.6
1,614,572	-		PFLU_RS07240	0.27	+1.3
1,614,665	+		PFLU_RS07240	0.36	-0.8
1,614,666	-		PFLU_RS07240	0.37	-0.8
1,614,721	-		PFLU_RS07240	0.42	+0.2
1,614,856	+		PFLU_RS07240	0.56	-0.0
1,614,867	+		PFLU_RS07240	0.57	+0.2
1,614,867	+		PFLU_RS07240	0.57	-0.4
1,614,892	+		PFLU_RS07240	0.60	+0.8
1,614,893	-		PFLU_RS07240	0.60	+0.2
1,614,893	-		PFLU_RS07240	0.60	-0.7
1,614,893	-		PFLU_RS07240	0.60	+1.3
1,614,893	-		PFLU_RS07240	0.60	+0.2
1,614,964	+		PFLU_RS07240	0.67	-0.2
1,614,964	+		PFLU_RS07240	0.67	-0.6
1,614,964	+		PFLU_RS07240	0.67	+0.3
1,614,964	+		PFLU_RS07240	0.67	-0.2
1,614,964	+		PFLU_RS07240	0.67	-0.6
1,614,964	+		PFLU_RS07240	0.67	-0.1
1,614,964	+		PFLU_RS07240	0.67	+0.1
1,614,965	-		PFLU_RS07240	0.68	-0.8
1,615,001	-		PFLU_RS07240	0.71	+0.4
1,615,052	+		PFLU_RS07240	0.77	+1.4
1,615,052	+		PFLU_RS07240	0.77	+0.9
1,615,052	+		PFLU_RS07240	0.77	+0.4
1,615,052	+		PFLU_RS07240	0.77	-0.3
1,615,052	+		PFLU_RS07240	0.77	+0.2
1,615,052	+		PFLU_RS07240	0.77	+0.6
1,615,052	+		PFLU_RS07240	0.77	+1.5
1,615,052	+		PFLU_RS07240	0.77	-2.2
1,615,053	-		PFLU_RS07240	0.77	+0.2
1,615,053	-		PFLU_RS07240	0.77	-1.4
1,615,053	-		PFLU_RS07240	0.77	-0.0
1,615,053	-		PFLU_RS07240	0.77	+0.8
1,615,053	-		PFLU_RS07240	0.77	+0.1
1,615,053	-		PFLU_RS07240	0.77	+0.8
1,615,053	-		PFLU_RS07240	0.77	-0.2
1,615,053	-		PFLU_RS07240	0.77	-0.0
1,615,165	+		PFLU_RS07240	0.88	+0.8
1,615,206	+				+1.4
1,615,206	+				-0.2
1,615,206	+				+0.3
1,615,207	-				-0.8
1,615,207	-				+1.8
1,615,288	+				+0.7
1,615,288	+				+2.8
1,615,288	+				-0.2
1,615,288	+				-2.1
1,615,288	+				+0.9
1,615,288	+				+1.6
1,615,288	+				+0.8
1,615,288	+				-1.9
1,615,288	+				-0.8
1,615,288	+				-1.5
1,615,288	+				-0.6
1,615,288	+				-1.7
1,615,288	+				-0.0
1,615,288	+				-0.9
1,615,288	+				+1.1
1,615,288	+				+0.1
1,615,289	-				-0.6
1,615,289	-				+0.1
1,615,289	-				+0.3
1,615,289	-				+0.4
1,615,289	-				+0.2
1,615,289	-				+0.6
1,615,289	-				+0.2
1,615,289	-				+1.4
1,615,289	-				-3.1
1,615,289	-				-0.3
1,615,289	-				+0.3
1,615,289	-				+1.8
1,615,312	+				+0.4
1,615,312	+				-1.2
1,615,312	+				-0.1
1,615,313	-				+0.9
1,615,313	-				+0.7
1,615,313	-				-1.2
1,615,313	-				-2.6
1,615,313	-				+0.4
1,615,392	+		PFLU_RS31440	0.48	-0.4
1,615,393	-		PFLU_RS31440	0.48	+0.9
1,615,393	-		PFLU_RS31440	0.48	-0.5
1,615,394	+		PFLU_RS31440	0.49	+1.8
1,615,394	+		PFLU_RS31440	0.49	+0.1
1,615,395	-		PFLU_RS31440	0.49	-0.0
1,615,395	-		PFLU_RS31440	0.49	+0.0
1,615,510	+				+0.8
1,615,510	+				-1.2
1,615,510	+				-0.9
1,615,510	+				+0.5
1,615,510	+				-1.3
1,615,510	+				-0.1
1,615,510	+				+0.3
1,615,510	+				-1.6
1,615,510	+				+0.2
1,615,510	+				-0.2
1,615,510	+				+1.2
1,615,510	+				-0.6
1,615,510	+				+0.4
1,615,510	+				-0.6
1,615,510	+				+0.6
1,615,510	+				+0.4
1,615,510	+				+0.6
1,615,511	-				+1.8
1,615,511	-				+0.1
1,615,511	-				-2.2
1,615,511	-				+0.4
1,615,511	-				+0.7
1,615,511	-				+1.8
1,615,511	-				-2.8
1,615,511	-				-0.0
1,615,511	-				-0.6
1,615,511	-				+0.5
1,615,535	+				-0.9
1,615,535	+				+1.0
1,615,535	+				-0.3
1,615,535	+				+0.4
1,615,535	+				+0.4
1,615,535	+				+0.2
1,615,535	+				-1.6
1,615,535	+				+1.1
1,615,536	-				-0.6
1,615,536	-				-1.0
1,615,536	-				-0.8
1,615,536	-				+0.4
1,615,536	-				-0.2
1,615,536	-				-0.7
1,615,536	-				+0.6
1,615,536	-				-0.4
1,615,536	-				-1.7
1,615,536	-				-1.9
1,615,539	+				-0.2
1,615,539	+				-1.5
1,615,539	+				+0.8
1,615,539	+				+0.8
1,615,540	-				+0.6
1,615,540	-				+0.6
1,615,540	-				+0.9
1,615,540	-				-2.1
1,615,540	-				+0.2
1,615,545	+				-0.1
1,615,546	-				-1.3
1,615,578	+				-0.2
1,615,578	+				-1.0
1,615,578	+				-0.8
1,615,648	+				-0.3
1,615,649	-				-0.5
1,615,649	-				+0.2
1,615,649	-				-1.3
1,615,655	-		PFLU_RS07245	0.10	+1.8
1,615,838	+		PFLU_RS07245	0.23	+0.6
1,615,838	+		PFLU_RS07245	0.23	-1.5
1,615,838	+		PFLU_RS07245	0.23	-1.6
1,615,838	+		PFLU_RS07245	0.23	+0.7
1,615,838	+		PFLU_RS07245	0.23	-0.2
1,615,839	-		PFLU_RS07245	0.23	+0.8
1,615,839	-		PFLU_RS07245	0.23	-0.9
1,615,839	-		PFLU_RS07245	0.23	+1.2
1,615,839	-		PFLU_RS07245	0.23	+0.3
1,615,839	-		PFLU_RS07245	0.23	-2.3
1,615,839	-		PFLU_RS07245	0.23	+1.8
1,615,839	-		PFLU_RS07245	0.23	-0.2
1,615,839	-		PFLU_RS07245	0.23	-1.4
1,615,839	-		PFLU_RS07245	0.23	-0.6
1,615,839	-		PFLU_RS07245	0.23	-1.9
1,615,840	+		PFLU_RS07245	0.23	+1.8
1,615,840	+		PFLU_RS07245	0.23	+2.1
1,615,841	-		PFLU_RS07245	0.23	+0.8
1,615,841	-		PFLU_RS07245	0.23	-2.0
1,616,000	-		PFLU_RS07245	0.34	-1.4
1,616,065	+		PFLU_RS07245	0.39	-1.2
1,616,065	+		PFLU_RS07245	0.39	-0.4
1,616,120	+		PFLU_RS07245	0.42	-1.5
1,616,120	+		PFLU_RS07245	0.42	+0.4
1,616,120	+		PFLU_RS07245	0.42	-0.6
1,616,120	+		PFLU_RS07245	0.42	-0.6
1,616,121	-		PFLU_RS07245	0.42	-1.2
1,616,121	-		PFLU_RS07245	0.42	-1.0
1,616,121	-		PFLU_RS07245	0.42	-1.1
1,616,121	-		PFLU_RS07245	0.42	+0.5
1,616,161	+		PFLU_RS07245	0.45	-0.2
1,616,161	+		PFLU_RS07245	0.45	-0.3
1,616,162	-		PFLU_RS07245	0.45	-0.3
1,616,222	+		PFLU_RS07245	0.49	+0.4
1,616,222	+		PFLU_RS07245	0.49	-2.2
1,616,222	+		PFLU_RS07245	0.49	-0.6
1,616,222	+		PFLU_RS07245	0.49	-0.1
1,616,223	-		PFLU_RS07245	0.50	+0.1
1,616,223	-		PFLU_RS07245	0.50	-0.5
1,616,223	-		PFLU_RS07245	0.50	-1.3
1,616,223	-		PFLU_RS07245	0.50	+0.6
1,616,806	+				+0.2
1,616,807	-				-0.2
1,616,945	+				-1.0
1,616,945	+				+0.2
1,616,946	-				-0.2
1,616,946	-				-1.4
1,617,014	+				+0.7
1,617,015	-				-0.4
1,617,167	+		PFLU_RS07250	0.11	-0.4
1,617,168	-		PFLU_RS07250	0.11	+0.6
1,617,168	-		PFLU_RS07250	0.11	+0.9
1,617,347	+		PFLU_RS07250	0.23	-0.1
1,617,348	-		PFLU_RS07250	0.23	+0.2
1,617,348	-		PFLU_RS07250	0.23	-0.1
1,617,443	+		PFLU_RS07250	0.30	+2.0
1,617,443	+		PFLU_RS07250	0.30	-0.7
1,617,443	+		PFLU_RS07250	0.30	+0.1
1,617,443	+		PFLU_RS07250	0.30	-0.1
1,617,443	+		PFLU_RS07250	0.30	+1.1
1,617,443	+		PFLU_RS07250	0.30	+0.4
1,617,443	+		PFLU_RS07250	0.30	-0.0
1,617,443	+		PFLU_RS07250	0.30	-1.8
1,617,443	+		PFLU_RS07250	0.30	-2.2
1,617,443	+		PFLU_RS07250	0.30	-1.6
1,617,443	+		PFLU_RS07250	0.30	+0.2
1,617,444	-		PFLU_RS07250	0.30	-2.7
1,617,444	-		PFLU_RS07250	0.30	-0.5
1,617,444	-		PFLU_RS07250	0.30	-0.2
1,617,444	-		PFLU_RS07250	0.30	-0.8
1,617,444	-		PFLU_RS07250	0.30	+0.6
1,617,444	-		PFLU_RS07250	0.30	-3.4
1,617,444	-		PFLU_RS07250	0.30	+0.8
1,617,444	-		PFLU_RS07250	0.30	-0.6
1,617,444	-		PFLU_RS07250	0.30	+1.0
1,617,444	-		PFLU_RS07250	0.30	-1.2
1,617,444	-		PFLU_RS07250	0.30	-0.3
1,617,444	-		PFLU_RS07250	0.30	+0.1
1,617,444	-		PFLU_RS07250	0.30	-0.0
1,617,444	-		PFLU_RS07250	0.30	-0.3
1,617,529	-		PFLU_RS07250	0.36	-0.4
1,617,617	+		PFLU_RS07250	0.42	+1.1
1,617,617	+		PFLU_RS07250	0.42	-0.8
1,617,650	+		PFLU_RS07250	0.44	-1.8