Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02110 and PFLU_RS02115 overlap by 11 nucleotides PFLU_RS02115 and PFLU_RS02120 are separated by 44 nucleotides PFLU_RS02120 and PFLU_RS02125 overlap by 8 nucleotides
PFLU_RS02110: PFLU_RS02110 - MMPL family transporter, at 474,987 to 477,299
_RS02110
PFLU_RS02115: PFLU_RS02115 - outer membrane lipoprotein carrier protein LolA, at 477,289 to 477,942
_RS02115
PFLU_RS02120: PFLU_RS02120 - acyl-CoA thioesterase, at 477,987 to 478,412
_RS02120
PFLU_RS02125: PFLU_RS02125 - aromatic amino acid lyase, at 478,405 to 479,946
_RS02125
Position (kb) 477
478 Strain fitness (log2 ratio) -2
-1
0
1
2 at 476.335 kb on + strand, within PFLU_RS02110 at 476.335 kb on + strand, within PFLU_RS02110 at 476.335 kb on + strand, within PFLU_RS02110 at 476.336 kb on - strand, within PFLU_RS02110 at 476.336 kb on - strand, within PFLU_RS02110 at 476.402 kb on + strand, within PFLU_RS02110 at 476.402 kb on + strand, within PFLU_RS02110 at 476.403 kb on - strand, within PFLU_RS02110 at 476.585 kb on - strand, within PFLU_RS02110 at 476.715 kb on + strand, within PFLU_RS02110 at 476.715 kb on + strand, within PFLU_RS02110 at 476.716 kb on - strand, within PFLU_RS02110 at 476.716 kb on - strand, within PFLU_RS02110 at 476.883 kb on + strand, within PFLU_RS02110 at 476.884 kb on - strand, within PFLU_RS02110 at 476.884 kb on - strand, within PFLU_RS02110 at 476.884 kb on - strand, within PFLU_RS02110 at 476.915 kb on + strand, within PFLU_RS02110 at 476.916 kb on - strand, within PFLU_RS02110 at 477.051 kb on + strand, within PFLU_RS02110 at 477.051 kb on + strand, within PFLU_RS02110 at 477.052 kb on - strand, within PFLU_RS02110 at 477.837 kb on + strand, within PFLU_RS02115 at 477.837 kb on - strand, within PFLU_RS02115 at 477.838 kb on - strand, within PFLU_RS02115 at 477.907 kb on + strand at 478.005 kb on + strand at 478.005 kb on + strand at 478.005 kb on + strand at 478.005 kb on + strand at 478.006 kb on - strand at 478.006 kb on - strand at 478.126 kb on + strand, within PFLU_RS02120 at 478.126 kb on + strand, within PFLU_RS02120 at 478.126 kb on + strand, within PFLU_RS02120 at 478.126 kb on + strand, within PFLU_RS02120 at 478.127 kb on - strand, within PFLU_RS02120 at 478.127 kb on - strand, within PFLU_RS02120 at 478.127 kb on - strand, within PFLU_RS02120 at 478.203 kb on + strand, within PFLU_RS02120 at 478.204 kb on - strand, within PFLU_RS02120 at 478.204 kb on - strand, within PFLU_RS02120 at 478.207 kb on + strand, within PFLU_RS02120 at 478.208 kb on - strand, within PFLU_RS02120 at 478.208 kb on - strand, within PFLU_RS02120 at 478.208 kb on - strand, within PFLU_RS02120 at 478.208 kb on - strand, within PFLU_RS02120 at 478.264 kb on + strand, within PFLU_RS02120 at 478.264 kb on + strand, within PFLU_RS02120 at 478.264 kb on + strand, within PFLU_RS02120 at 478.264 kb on + strand, within PFLU_RS02120 at 478.265 kb on - strand, within PFLU_RS02120 at 478.265 kb on - strand, within PFLU_RS02120 at 478.265 kb on - strand, within PFLU_RS02120 at 478.312 kb on + strand, within PFLU_RS02120 at 478.312 kb on + strand, within PFLU_RS02120 at 478.321 kb on + strand, within PFLU_RS02120 at 478.322 kb on - strand, within PFLU_RS02120 at 478.346 kb on + strand, within PFLU_RS02120 at 478.347 kb on - strand, within PFLU_RS02120 at 478.347 kb on - strand, within PFLU_RS02120 at 478.347 kb on - strand, within PFLU_RS02120 at 478.407 kb on - strand at 478.938 kb on + strand, within PFLU_RS02125 at 478.939 kb on - strand, within PFLU_RS02125
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 476,335 + PFLU_RS02110 0.58 -1.4 476,335 + PFLU_RS02110 0.58 +0.5 476,335 + PFLU_RS02110 0.58 +0.8 476,336 - PFLU_RS02110 0.58 -0.3 476,336 - PFLU_RS02110 0.58 +0.8 476,402 + PFLU_RS02110 0.61 +1.8 476,402 + PFLU_RS02110 0.61 -1.0 476,403 - PFLU_RS02110 0.61 -0.7 476,585 - PFLU_RS02110 0.69 -0.1 476,715 + PFLU_RS02110 0.75 -0.6 476,715 + PFLU_RS02110 0.75 +0.8 476,716 - PFLU_RS02110 0.75 +0.4 476,716 - PFLU_RS02110 0.75 -1.3 476,883 + PFLU_RS02110 0.82 -0.6 476,884 - PFLU_RS02110 0.82 -0.1 476,884 - PFLU_RS02110 0.82 +0.1 476,884 - PFLU_RS02110 0.82 +1.8 476,915 + PFLU_RS02110 0.83 +0.3 476,916 - PFLU_RS02110 0.83 +0.9 477,051 + PFLU_RS02110 0.89 -0.7 477,051 + PFLU_RS02110 0.89 -1.4 477,052 - PFLU_RS02110 0.89 -0.7 477,837 + PFLU_RS02115 0.84 -0.7 477,837 - PFLU_RS02115 0.84 +0.6 477,838 - PFLU_RS02115 0.84 -1.5 477,907 + +0.7 478,005 + +0.8 478,005 + +0.1 478,005 + +1.3 478,005 + -0.4 478,006 - -0.3 478,006 - -0.4 478,126 + PFLU_RS02120 0.33 +2.7 478,126 + PFLU_RS02120 0.33 +0.1 478,126 + PFLU_RS02120 0.33 +1.3 478,126 + PFLU_RS02120 0.33 +0.9 478,127 - PFLU_RS02120 0.33 +1.2 478,127 - PFLU_RS02120 0.33 +1.6 478,127 - PFLU_RS02120 0.33 -1.1 478,203 + PFLU_RS02120 0.51 +0.3 478,204 - PFLU_RS02120 0.51 -2.7 478,204 - PFLU_RS02120 0.51 +0.2 478,207 + PFLU_RS02120 0.52 +0.3 478,208 - PFLU_RS02120 0.52 -0.7 478,208 - PFLU_RS02120 0.52 -0.7 478,208 - PFLU_RS02120 0.52 +1.5 478,208 - PFLU_RS02120 0.52 +0.1 478,264 + PFLU_RS02120 0.65 -0.3 478,264 + PFLU_RS02120 0.65 +0.1 478,264 + PFLU_RS02120 0.65 +0.8 478,264 + PFLU_RS02120 0.65 -0.5 478,265 - PFLU_RS02120 0.65 +0.9 478,265 - PFLU_RS02120 0.65 -0.1 478,265 - PFLU_RS02120 0.65 -0.1 478,312 + PFLU_RS02120 0.76 -0.7 478,312 + PFLU_RS02120 0.76 -2.2 478,321 + PFLU_RS02120 0.78 +0.9 478,322 - PFLU_RS02120 0.79 -1.7 478,346 + PFLU_RS02120 0.84 +1.9 478,347 - PFLU_RS02120 0.85 -0.3 478,347 - PFLU_RS02120 0.85 -1.4 478,347 - PFLU_RS02120 0.85 +0.2 478,407 - -0.5 478,938 + PFLU_RS02125 0.35 +0.0 478,939 - PFLU_RS02125 0.35 +0.9
Or see this region's nucleotide sequence