Experiment: Dimethyl Sulfoxide 4 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01405 and PS417_01410 overlap by 23 nucleotides PS417_01410 and PS417_01415 overlap by 11 nucleotides
PS417_01405: PS417_01405 - sugar transporter, at 310,332 to 311,699
_01405
PS417_01410: PS417_01410 - transporter, at 311,677 to 312,672
_01410
PS417_01415: PS417_01415 - glycosyl transferase family 1, at 312,662 to 314,176
_01415
Position (kb) 311
312
313 Strain fitness (log2 ratio) -1
0
1
2 at 310.714 kb on - strand, within PS417_01405 at 311.596 kb on + strand at 311.649 kb on - strand at 311.649 kb on - strand at 311.659 kb on - strand at 311.659 kb on - strand at 311.950 kb on + strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 311.951 kb on - strand, within PS417_01410 at 312.323 kb on - strand, within PS417_01410 at 312.577 kb on + strand at 312.671 kb on - strand at 312.725 kb on + strand at 312.726 kb on - strand at 312.741 kb on + strand at 312.741 kb on + strand at 312.824 kb on + strand, within PS417_01415 at 312.825 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 312.827 kb on - strand, within PS417_01415 at 313.033 kb on + strand, within PS417_01415 at 313.034 kb on - strand, within PS417_01415 at 313.050 kb on + strand, within PS417_01415 at 313.092 kb on - strand, within PS417_01415 at 313.128 kb on - strand, within PS417_01415 at 313.277 kb on + strand, within PS417_01415 at 313.278 kb on - strand, within PS417_01415 at 313.278 kb on - strand, within PS417_01415 at 313.297 kb on + strand, within PS417_01415 at 313.298 kb on - strand, within PS417_01415 at 313.298 kb on - strand, within PS417_01415 at 313.301 kb on + strand, within PS417_01415 at 313.397 kb on + strand, within PS417_01415 at 313.421 kb on + strand, within PS417_01415 at 313.422 kb on - strand, within PS417_01415 at 313.448 kb on + strand, within PS417_01415 at 313.449 kb on - strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415 at 313.478 kb on + strand, within PS417_01415
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 4 vol% remove 310,714 - PS417_01405 0.28 +2.1 311,596 + +1.8 311,649 - +2.2 311,649 - +2.2 311,659 - +1.8 311,659 - +2.0 311,950 + PS417_01410 0.27 +1.9 311,951 - PS417_01410 0.28 +1.9 311,951 - PS417_01410 0.28 +1.3 311,951 - PS417_01410 0.28 +1.9 312,323 - PS417_01410 0.65 +1.8 312,577 + +1.4 312,671 - +1.8 312,725 + +1.7 312,726 - +0.3 312,741 + +2.3 312,741 + +2.0 312,824 + PS417_01415 0.11 +1.3 312,825 - PS417_01415 0.11 +2.0 312,827 - PS417_01415 0.11 +2.7 312,827 - PS417_01415 0.11 +2.0 312,827 - PS417_01415 0.11 +1.8 313,033 + PS417_01415 0.24 +1.8 313,034 - PS417_01415 0.25 +1.5 313,050 + PS417_01415 0.26 +2.5 313,092 - PS417_01415 0.28 +1.6 313,128 - PS417_01415 0.31 +2.0 313,277 + PS417_01415 0.41 +1.9 313,278 - PS417_01415 0.41 +1.9 313,278 - PS417_01415 0.41 +1.2 313,297 + PS417_01415 0.42 +1.9 313,298 - PS417_01415 0.42 +1.8 313,298 - PS417_01415 0.42 +1.9 313,301 + PS417_01415 0.42 +1.7 313,397 + PS417_01415 0.49 +1.6 313,421 + PS417_01415 0.50 +2.0 313,422 - PS417_01415 0.50 +1.0 313,448 + PS417_01415 0.52 +2.0 313,449 - PS417_01415 0.52 +1.3 313,478 + PS417_01415 0.54 +1.4 313,478 + PS417_01415 0.54 +1.9 313,478 + PS417_01415 0.54 +1.6
Or see this region's nucleotide sequence