Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4411 and PfGW456L13_4412 are separated by 21 nucleotides PfGW456L13_4412 and PfGW456L13_4413 are separated by 121 nucleotides PfGW456L13_4413 and PfGW456L13_4414 overlap by 44 nucleotides
PfGW456L13_4411 - Putative two-component system sensor kinase, at 4,924,521 to 4,925,864
_4411
PfGW456L13_4412 - Nitroreductase family protein, at 4,925,886 to 4,926,452
_4412
PfGW456L13_4413 - Potassium uptake protein TrkH, at 4,926,574 to 4,928,028
_4413
PfGW456L13_4414 - Transcriptional regulator, AraC family, at 4,927,985 to 4,929,013
_4414
Position (kb)
4926
4927
4928
4929 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4925.670 kb on + strand, within PfGW456L13_4411 at 4925.670 kb on + strand, within PfGW456L13_4411 at 4925.670 kb on + strand, within PfGW456L13_4411 at 4925.670 kb on + strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.671 kb on - strand, within PfGW456L13_4411 at 4925.697 kb on + strand, within PfGW456L13_4411 at 4925.851 kb on + strand at 4925.879 kb on + strand at 4925.879 kb on + strand at 4925.879 kb on + strand at 4925.971 kb on + strand, within PfGW456L13_4412 at 4925.971 kb on + strand, within PfGW456L13_4412 at 4926.035 kb on - strand, within PfGW456L13_4412 at 4926.051 kb on - strand, within PfGW456L13_4412 at 4926.080 kb on - strand at 4926.481 kb on + strand at 4926.482 kb on - strand at 4926.486 kb on + strand at 4926.486 kb on + strand at 4926.486 kb on + strand at 4926.487 kb on - strand at 4926.487 kb on - strand at 4926.487 kb on - strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.492 kb on + strand at 4926.493 kb on - strand at 4926.493 kb on - strand at 4926.493 kb on - strand at 4926.493 kb on - strand at 4926.493 kb on - strand at 4926.493 kb on - strand at 4926.515 kb on + strand at 4926.516 kb on - strand at 4926.516 kb on - strand at 4926.516 kb on - strand at 4926.535 kb on + strand at 4926.536 kb on - strand at 4926.536 kb on - strand at 4926.536 kb on - strand at 4926.536 kb on - strand at 4926.556 kb on - strand at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.793 kb on + strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.794 kb on - strand, within PfGW456L13_4413 at 4926.871 kb on + strand, within PfGW456L13_4413 at 4926.872 kb on - strand, within PfGW456L13_4413 at 4926.872 kb on - strand, within PfGW456L13_4413 at 4927.138 kb on + strand, within PfGW456L13_4413 at 4927.138 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.339 kb on + strand, within PfGW456L13_4413 at 4927.340 kb on - strand, within PfGW456L13_4413 at 4927.340 kb on - strand, within PfGW456L13_4413 at 4927.444 kb on + strand, within PfGW456L13_4413 at 4927.445 kb on - strand, within PfGW456L13_4413 at 4927.445 kb on - strand, within PfGW456L13_4413 at 4927.582 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.654 kb on + strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.655 kb on - strand, within PfGW456L13_4413 at 4927.677 kb on + strand at 4927.717 kb on + strand, within PfGW456L13_4413 at 4927.718 kb on - strand, within PfGW456L13_4413 at 4927.718 kb on - strand, within PfGW456L13_4413 at 4928.004 kb on + strand at 4928.136 kb on + strand, within PfGW456L13_4414 at 4928.136 kb on + strand, within PfGW456L13_4414 at 4928.137 kb on - strand, within PfGW456L13_4414 at 4928.137 kb on - strand, within PfGW456L13_4414 at 4928.137 kb on - strand, within PfGW456L13_4414 at 4928.137 kb on - strand, within PfGW456L13_4414 at 4928.175 kb on + strand, within PfGW456L13_4414 at 4928.227 kb on + strand, within PfGW456L13_4414 at 4928.379 kb on + strand, within PfGW456L13_4414 at 4928.380 kb on - strand, within PfGW456L13_4414 at 4928.476 kb on - strand, within PfGW456L13_4414 at 4928.515 kb on + strand, within PfGW456L13_4414 at 4928.516 kb on - strand, within PfGW456L13_4414 at 4928.516 kb on - strand, within PfGW456L13_4414 at 4928.516 kb on - strand, within PfGW456L13_4414 at 4928.517 kb on + strand, within PfGW456L13_4414 at 4928.517 kb on + strand, within PfGW456L13_4414 at 4928.517 kb on + strand, within PfGW456L13_4414 at 4928.517 kb on + strand, within PfGW456L13_4414 at 4928.518 kb on - strand, within PfGW456L13_4414 at 4928.543 kb on - strand, within PfGW456L13_4414 at 4928.575 kb on + strand, within PfGW456L13_4414 at 4928.576 kb on - strand, within PfGW456L13_4414 at 4928.576 kb on - strand, within PfGW456L13_4414 at 4928.682 kb on + strand, within PfGW456L13_4414 at 4928.739 kb on + strand, within PfGW456L13_4414
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 4,925,670 + PfGW456L13_4411 0.85 -2.4 4,925,670 + PfGW456L13_4411 0.85 -0.0 4,925,670 + PfGW456L13_4411 0.85 -0.1 4,925,670 + PfGW456L13_4411 0.85 +0.9 4,925,671 - PfGW456L13_4411 0.86 +0.1 4,925,671 - PfGW456L13_4411 0.86 -0.7 4,925,671 - PfGW456L13_4411 0.86 +1.1 4,925,671 - PfGW456L13_4411 0.86 +0.6 4,925,671 - PfGW456L13_4411 0.86 +1.2 4,925,671 - PfGW456L13_4411 0.86 +0.0 4,925,671 - PfGW456L13_4411 0.86 +2.2 4,925,697 + PfGW456L13_4411 0.88 +0.3 4,925,851 + -2.3 4,925,879 + +0.6 4,925,879 + +0.9 4,925,879 + +1.2 4,925,971 + PfGW456L13_4412 0.15 +1.5 4,925,971 + PfGW456L13_4412 0.15 -1.8 4,926,035 - PfGW456L13_4412 0.26 -0.3 4,926,051 - PfGW456L13_4412 0.29 +1.1 4,926,080 - +0.5 4,926,481 + +0.2 4,926,482 - +0.8 4,926,486 + +1.1 4,926,486 + -2.4 4,926,486 + +0.1 4,926,487 - +0.9 4,926,487 - -0.3 4,926,487 - +0.6 4,926,492 + +1.1 4,926,492 + -2.6 4,926,492 + -0.3 4,926,492 + +1.6 4,926,492 + +0.6 4,926,492 + -0.9 4,926,492 + +0.6 4,926,492 + +0.7 4,926,492 + -0.2 4,926,492 + +1.3 4,926,493 - -1.5 4,926,493 - +0.3 4,926,493 - -0.1 4,926,493 - -1.1 4,926,493 - -1.0 4,926,493 - +1.1 4,926,515 + -0.7 4,926,516 - -3.3 4,926,516 - -0.2 4,926,516 - -1.2 4,926,535 + +0.7 4,926,536 - -1.7 4,926,536 - +0.7 4,926,536 - +1.1 4,926,536 - -3.2 4,926,556 - +1.6 4,926,793 + PfGW456L13_4413 0.15 +2.7 4,926,793 + PfGW456L13_4413 0.15 +2.0 4,926,793 + PfGW456L13_4413 0.15 -1.7 4,926,793 + PfGW456L13_4413 0.15 -2.3 4,926,793 + PfGW456L13_4413 0.15 -0.4 4,926,793 + PfGW456L13_4413 0.15 +2.0 4,926,793 + PfGW456L13_4413 0.15 +1.0 4,926,793 + PfGW456L13_4413 0.15 +1.0 4,926,793 + PfGW456L13_4413 0.15 +0.7 4,926,793 + PfGW456L13_4413 0.15 -0.0 4,926,794 - PfGW456L13_4413 0.15 +0.8 4,926,794 - PfGW456L13_4413 0.15 +2.6 4,926,794 - PfGW456L13_4413 0.15 -1.5 4,926,794 - PfGW456L13_4413 0.15 -3.0 4,926,794 - PfGW456L13_4413 0.15 +0.4 4,926,794 - PfGW456L13_4413 0.15 +1.9 4,926,794 - PfGW456L13_4413 0.15 -1.7 4,926,794 - PfGW456L13_4413 0.15 -0.4 4,926,794 - PfGW456L13_4413 0.15 -3.2 4,926,794 - PfGW456L13_4413 0.15 -0.7 4,926,794 - PfGW456L13_4413 0.15 -2.6 4,926,794 - PfGW456L13_4413 0.15 +0.1 4,926,794 - PfGW456L13_4413 0.15 +0.4 4,926,794 - PfGW456L13_4413 0.15 +0.5 4,926,871 + PfGW456L13_4413 0.20 +2.4 4,926,872 - PfGW456L13_4413 0.20 -1.9 4,926,872 - PfGW456L13_4413 0.20 -0.1 4,927,138 + PfGW456L13_4413 0.39 +1.4 4,927,138 + PfGW456L13_4413 0.39 +2.9 4,927,339 + PfGW456L13_4413 0.53 +0.8 4,927,339 + PfGW456L13_4413 0.53 +0.1 4,927,339 + PfGW456L13_4413 0.53 +1.5 4,927,339 + PfGW456L13_4413 0.53 +0.7 4,927,339 + PfGW456L13_4413 0.53 -0.3 4,927,339 + PfGW456L13_4413 0.53 -3.2 4,927,340 - PfGW456L13_4413 0.53 -0.7 4,927,340 - PfGW456L13_4413 0.53 -1.2 4,927,444 + PfGW456L13_4413 0.60 -1.4 4,927,445 - PfGW456L13_4413 0.60 +1.0 4,927,445 - PfGW456L13_4413 0.60 +0.8 4,927,582 + PfGW456L13_4413 0.69 +0.3 4,927,654 + PfGW456L13_4413 0.74 +0.7 4,927,654 + PfGW456L13_4413 0.74 -2.1 4,927,654 + PfGW456L13_4413 0.74 +0.6 4,927,654 + PfGW456L13_4413 0.74 -0.3 4,927,654 + PfGW456L13_4413 0.74 +3.0 4,927,654 + PfGW456L13_4413 0.74 -0.5 4,927,654 + PfGW456L13_4413 0.74 -1.3 4,927,655 - PfGW456L13_4413 0.74 +1.5 4,927,655 - PfGW456L13_4413 0.74 -2.3 4,927,655 - PfGW456L13_4413 0.74 +0.3 4,927,655 - PfGW456L13_4413 0.74 -1.6 4,927,655 - PfGW456L13_4413 0.74 -2.4 4,927,655 - PfGW456L13_4413 0.74 -3.5 4,927,655 - PfGW456L13_4413 0.74 +2.6 4,927,655 - PfGW456L13_4413 0.74 +1.1 4,927,655 - PfGW456L13_4413 0.74 +0.4 4,927,677 + +2.3 4,927,717 + PfGW456L13_4413 0.79 +0.5 4,927,718 - PfGW456L13_4413 0.79 +1.2 4,927,718 - PfGW456L13_4413 0.79 +1.2 4,928,004 + -0.4 4,928,136 + PfGW456L13_4414 0.15 +2.4 4,928,136 + PfGW456L13_4414 0.15 +0.6 4,928,137 - PfGW456L13_4414 0.15 +0.5 4,928,137 - PfGW456L13_4414 0.15 +0.0 4,928,137 - PfGW456L13_4414 0.15 -1.6 4,928,137 - PfGW456L13_4414 0.15 -0.3 4,928,175 + PfGW456L13_4414 0.18 +0.9 4,928,227 + PfGW456L13_4414 0.24 -2.1 4,928,379 + PfGW456L13_4414 0.38 -3.0 4,928,380 - PfGW456L13_4414 0.38 -0.5 4,928,476 - PfGW456L13_4414 0.48 +0.1 4,928,515 + PfGW456L13_4414 0.52 -0.9 4,928,516 - PfGW456L13_4414 0.52 -0.2 4,928,516 - PfGW456L13_4414 0.52 -2.3 4,928,516 - PfGW456L13_4414 0.52 +0.8 4,928,517 + PfGW456L13_4414 0.52 -0.0 4,928,517 + PfGW456L13_4414 0.52 -2.6 4,928,517 + PfGW456L13_4414 0.52 -0.1 4,928,517 + PfGW456L13_4414 0.52 -0.1 4,928,518 - PfGW456L13_4414 0.52 +2.0 4,928,543 - PfGW456L13_4414 0.54 +0.8 4,928,575 + PfGW456L13_4414 0.57 -0.0 4,928,576 - PfGW456L13_4414 0.57 -1.7 4,928,576 - PfGW456L13_4414 0.57 -0.3 4,928,682 + PfGW456L13_4414 0.68 -0.8 4,928,739 + PfGW456L13_4414 0.73 -0.2
Or see this region's nucleotide sequence