Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3166

Experiment: Glycerol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol (C)
3,544,633	+		PfGW456L13_3165	0.31	+2.2
3,544,928	+		PfGW456L13_3165	0.54	-0.5
3,544,928	+		PfGW456L13_3165	0.54	+1.7
3,544,928	+		PfGW456L13_3165	0.54	-3.0
3,544,928	+		PfGW456L13_3165	0.54	-1.0
3,544,929	-		PfGW456L13_3165	0.54	+1.7
3,544,929	-		PfGW456L13_3165	0.54	+0.2
3,544,929	-		PfGW456L13_3165	0.54	+1.4
3,544,929	-		PfGW456L13_3165	0.54	-1.2
3,544,929	-		PfGW456L13_3165	0.54	-0.4
3,544,937	+		PfGW456L13_3165	0.55	+0.3
3,544,952	+		PfGW456L13_3165	0.56	-0.1
3,544,953	-		PfGW456L13_3165	0.56	-0.5
3,544,953	-		PfGW456L13_3165	0.56	+0.5
3,544,953	-		PfGW456L13_3165	0.56	-3.1
3,544,953	-		PfGW456L13_3165	0.56	-2.6
3,544,953	-		PfGW456L13_3165	0.56	+0.5
3,544,965	-		PfGW456L13_3165	0.57	-1.2
3,544,979	+		PfGW456L13_3165	0.58	-2.6
3,544,979	+		PfGW456L13_3165	0.58	+2.4
3,544,980	-		PfGW456L13_3165	0.58	-0.7
3,544,980	-		PfGW456L13_3165	0.58	+0.7
3,545,027	+		PfGW456L13_3165	0.62	+1.2
3,545,027	+		PfGW456L13_3165	0.62	-1.3
3,545,027	+		PfGW456L13_3165	0.62	+0.4
3,545,028	-		PfGW456L13_3165	0.62	+1.0
3,545,040	+		PfGW456L13_3165	0.63	+0.6
3,545,178	-		PfGW456L13_3165	0.74	+0.5
3,545,178	-		PfGW456L13_3165	0.74	-1.0
3,545,235	+		PfGW456L13_3165	0.78	+1.6
3,545,235	+		PfGW456L13_3165	0.78	+0.6
3,545,336	+		PfGW456L13_3165	0.86	+0.1
3,545,336	+		PfGW456L13_3165	0.86	+0.4
3,545,336	+		PfGW456L13_3165	0.86	+0.1
3,545,336	+		PfGW456L13_3165	0.86	+1.0
3,545,336	+		PfGW456L13_3165	0.86	+1.2
3,545,336	+		PfGW456L13_3165	0.86	+1.6
3,545,336	+		PfGW456L13_3165	0.86	+0.9
3,545,345	+		PfGW456L13_3165	0.87	-1.8
3,545,345	+		PfGW456L13_3165	0.87	+0.8
3,545,345	+		PfGW456L13_3165	0.87	+0.2
3,545,345	+		PfGW456L13_3165	0.87	-1.4
3,545,345	+		PfGW456L13_3165	0.87	-3.1
3,545,346	-		PfGW456L13_3165	0.87	+0.0
3,545,346	-		PfGW456L13_3165	0.87	-0.5
3,545,346	-		PfGW456L13_3165	0.87	-1.2
3,545,346	-		PfGW456L13_3165	0.87	-0.5
3,545,346	-		PfGW456L13_3165	0.87	+0.9
3,545,384	+				+0.5
3,545,385	-				+2.0
3,545,385	-				+0.7
3,545,385	-				+0.3
3,545,390	+				+0.2
3,545,390	+				+0.6
3,545,390	+				-0.8
3,545,390	+				+0.7
3,545,390	+				-0.5
3,545,391	-				-0.1
3,545,391	-				+0.8
3,545,391	-				-0.7
3,545,391	-				+0.9
3,545,391	-				-0.7
3,545,391	-				+0.7
3,545,391	-				-1.1
3,545,451	-				+1.8
3,545,451	-				+1.8
3,545,513	+				+0.7
3,545,513	+				-0.0
3,545,514	-				+0.8
3,545,514	-				-1.2
3,545,514	-				+0.6
3,545,707	-				-1.3
3,545,790	+		PfGW456L13_3166	0.12	-2.5
3,545,790	+		PfGW456L13_3166	0.12	-1.3
3,545,791	-		PfGW456L13_3166	0.12	-0.0
3,545,791	-		PfGW456L13_3166	0.12	-0.1
3,545,791	-		PfGW456L13_3166	0.12	-2.5
3,545,799	+		PfGW456L13_3166	0.12	-0.5
3,545,799	+		PfGW456L13_3166	0.12	-1.1
3,545,800	-		PfGW456L13_3166	0.13	+0.2
3,545,800	-		PfGW456L13_3166	0.13	-0.1
3,545,800	-		PfGW456L13_3166	0.13	-3.4
3,545,955	+		PfGW456L13_3166	0.21	-2.5
3,545,955	+		PfGW456L13_3166	0.21	+1.5
3,545,955	+		PfGW456L13_3166	0.21	+0.4
3,545,956	-		PfGW456L13_3166	0.21	-0.4
3,545,956	-		PfGW456L13_3166	0.21	+1.1
3,546,049	+		PfGW456L13_3166	0.26	+0.0
3,546,049	+		PfGW456L13_3166	0.26	+0.7
3,546,049	+		PfGW456L13_3166	0.26	-3.8
3,546,057	+		PfGW456L13_3166	0.27	+0.4
3,546,057	+		PfGW456L13_3166	0.27	+0.7
3,546,057	+		PfGW456L13_3166	0.27	+0.0
3,546,058	-		PfGW456L13_3166	0.27	-0.4
3,546,058	-		PfGW456L13_3166	0.27	-0.7
3,546,058	-		PfGW456L13_3166	0.27	-0.8
3,546,059	+		PfGW456L13_3166	0.27	+1.5
3,546,059	+		PfGW456L13_3166	0.27	+0.4
3,546,059	+		PfGW456L13_3166	0.27	-0.4
3,546,060	-		PfGW456L13_3166	0.27	-1.7
3,546,060	-		PfGW456L13_3166	0.27	-1.0
3,546,060	-		PfGW456L13_3166	0.27	+0.1
3,546,060	-		PfGW456L13_3166	0.27	-0.8
3,546,060	-		PfGW456L13_3166	0.27	-0.2
3,546,114	+		PfGW456L13_3166	0.30	+2.3
3,546,115	-		PfGW456L13_3166	0.30	+0.1
3,546,115	-		PfGW456L13_3166	0.30	-0.3
3,546,115	-		PfGW456L13_3166	0.30	-0.7
3,546,173	-		PfGW456L13_3166	0.33	-1.1
3,546,514	+		PfGW456L13_3166	0.52	+1.3
3,546,514	+		PfGW456L13_3166	0.52	+0.8
3,546,514	+		PfGW456L13_3166	0.52	-0.9
3,546,514	+		PfGW456L13_3166	0.52	-0.3
3,546,514	+		PfGW456L13_3166	0.52	-1.4
3,546,514	+		PfGW456L13_3166	0.52	-2.5
3,546,515	-		PfGW456L13_3166	0.52	-1.4
3,546,810	+		PfGW456L13_3166	0.69	+1.6
3,546,810	+		PfGW456L13_3166	0.69	-0.3
3,546,928	-		PfGW456L13_3166	0.75	+0.1
3,547,119	+		PfGW456L13_3166	0.86	+0.3
3,547,119	+		PfGW456L13_3166	0.86	-1.9
3,547,119	+		PfGW456L13_3166	0.86	-0.6
3,547,119	+		PfGW456L13_3166	0.86	+1.4
3,547,119	+		PfGW456L13_3166	0.86	-1.0
3,547,120	-		PfGW456L13_3166	0.86	-0.3
3,547,120	-		PfGW456L13_3166	0.86	-0.5
3,547,120	-		PfGW456L13_3166	0.86	-0.3
3,547,128	+		PfGW456L13_3166	0.87	-1.4
3,547,359	+				+0.5
3,547,359	+				-0.3
3,547,360	-				-0.6
3,547,360	-				+1.0
3,547,411	+				+1.6
3,547,412	-				+1.3
3,547,412	-				+0.3
3,547,412	-				+0.7
3,547,412	-				-0.0
3,547,427	-				+1.6
3,547,457	+				-2.8
3,547,457	+				-1.9
3,547,512	-				+0.8
3,547,597	+				-0.8
3,547,597	+				-0.1
3,547,597	+				+0.2
3,547,598	-		PfGW456L13_3167	0.10	-1.5
3,547,598	-		PfGW456L13_3167	0.10	+1.2
3,547,598	-		PfGW456L13_3167	0.10	-1.1
3,547,848	-		PfGW456L13_3167	0.39	-0.2
3,548,133	+		PfGW456L13_3167	0.73	-3.0
3,548,134	-		PfGW456L13_3167	0.73	-0.7
3,548,149	-		PfGW456L13_3167	0.75	-0.6
3,548,149	-		PfGW456L13_3167	0.75	-0.8
3,548,149	-		PfGW456L13_3167	0.75	-1.0
3,548,149	-		PfGW456L13_3167	0.75	+0.6
3,548,240	-		PfGW456L13_3167	0.85	+1.1
3,548,292	+				+0.7
3,548,293	-				+0.1
3,548,293	-				+0.3
3,548,293	-				-1.3