Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_247

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_246 and PfGW456L13_247 overlap by 14 nucleotidesPfGW456L13_247 and PfGW456L13_248 overlap by 4 nucleotidesPfGW456L13_248 and PfGW456L13_249 overlap by 1 nucleotides PfGW456L13_246 - FIG064705: cation/hydrogen antiporter, at 290,693 to 291,853 _246 PfGW456L13_247 - FIG022199: FAD-binding protein, at 291,840 to 293,087 _247 PfGW456L13_248 - FIG025233: SAM-dependent methyltransferases, at 293,084 to 293,809 _248 PfGW456L13_249 - FIG085779: Lipoprotein, at 293,809 to 294,426 _249 Position (kb) 291 292 293 294Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 290.897 kb on + strand, within PfGW456L13_246at 290.897 kb on + strand, within PfGW456L13_246at 290.898 kb on - strand, within PfGW456L13_246at 290.898 kb on - strand, within PfGW456L13_246at 290.927 kb on + strand, within PfGW456L13_246at 290.928 kb on - strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.110 kb on + strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.111 kb on - strand, within PfGW456L13_246at 291.311 kb on + strand, within PfGW456L13_246at 291.312 kb on - strand, within PfGW456L13_246at 291.386 kb on + strand, within PfGW456L13_246at 291.387 kb on - strand, within PfGW456L13_246at 291.387 kb on - strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.390 kb on + strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.391 kb on - strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.464 kb on + strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.465 kb on - strand, within PfGW456L13_246at 291.737 kb on + strand, within PfGW456L13_246at 291.737 kb on + strand, within PfGW456L13_246at 291.738 kb on - strandat 291.769 kb on + strandat 291.770 kb on - strandat 291.802 kb on + strandat 292.099 kb on - strand, within PfGW456L13_247at 292.810 kb on + strand, within PfGW456L13_247at 292.899 kb on + strand, within PfGW456L13_247at 292.899 kb on + strand, within PfGW456L13_247at 292.900 kb on - strand, within PfGW456L13_247at 292.900 kb on - strand, within PfGW456L13_247at 293.090 kb on + strandat 293.090 kb on + strandat 293.091 kb on - strandat 293.091 kb on - strandat 293.091 kb on - strandat 293.091 kb on - strandat 293.091 kb on - strandat 293.091 kb on - strandat 293.105 kb on + strandat 293.105 kb on + strandat 293.105 kb on + strandat 293.105 kb on + strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.106 kb on - strandat 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.162 kb on + strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.163 kb on - strand, within PfGW456L13_248at 293.166 kb on + strand, within PfGW456L13_248at 293.166 kb on + strand, within PfGW456L13_248at 293.166 kb on + strand, within PfGW456L13_248at 293.166 kb on + strand, within PfGW456L13_248at 293.166 kb on + strand, within PfGW456L13_248at 293.167 kb on - strand, within PfGW456L13_248at 293.167 kb on - strand, within PfGW456L13_248at 293.167 kb on - strand, within PfGW456L13_248at 293.167 kb on - strand, within PfGW456L13_248at 293.493 kb on - strand, within PfGW456L13_248at 293.493 kb on - strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.546 kb on + strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.547 kb on - strand, within PfGW456L13_248at 293.555 kb on - strand, within PfGW456L13_248at 293.615 kb on + strand, within PfGW456L13_248at 293.670 kb on - strand, within PfGW456L13_248at 293.670 kb on - strand, within PfGW456L13_248at 293.675 kb on + strand, within PfGW456L13_248at 293.675 kb on + strand, within PfGW456L13_248at 293.898 kb on + strand, within PfGW456L13_249at 293.898 kb on + strand, within PfGW456L13_249at 293.898 kb on + strand, within PfGW456L13_249at 293.961 kb on - strand, within PfGW456L13_249

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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290,897 + PfGW456L13_246 0.18 -1.8
290,897 + PfGW456L13_246 0.18 +1.7
290,898 - PfGW456L13_246 0.18 +0.9
290,898 - PfGW456L13_246 0.18 +1.0
290,927 + PfGW456L13_246 0.20 -0.4
290,928 - PfGW456L13_246 0.20 +0.9
291,110 + PfGW456L13_246 0.36 +0.8
291,110 + PfGW456L13_246 0.36 +0.8
291,110 + PfGW456L13_246 0.36 -3.1
291,110 + PfGW456L13_246 0.36 +1.7
291,110 + PfGW456L13_246 0.36 +1.5
291,110 + PfGW456L13_246 0.36 +2.3
291,110 + PfGW456L13_246 0.36 +1.6
291,111 - PfGW456L13_246 0.36 +0.5
291,111 - PfGW456L13_246 0.36 +0.6
291,111 - PfGW456L13_246 0.36 +0.2
291,111 - PfGW456L13_246 0.36 +1.3
291,111 - PfGW456L13_246 0.36 +0.1
291,111 - PfGW456L13_246 0.36 +2.2
291,111 - PfGW456L13_246 0.36 +1.5
291,111 - PfGW456L13_246 0.36 -0.5
291,111 - PfGW456L13_246 0.36 +0.1
291,111 - PfGW456L13_246 0.36 -0.1
291,311 + PfGW456L13_246 0.53 +1.3
291,312 - PfGW456L13_246 0.53 +1.8
291,386 + PfGW456L13_246 0.60 +0.3
291,387 - PfGW456L13_246 0.60 +0.5
291,387 - PfGW456L13_246 0.60 +1.4
291,390 + PfGW456L13_246 0.60 -0.3
291,390 + PfGW456L13_246 0.60 +0.9
291,390 + PfGW456L13_246 0.60 +0.5
291,390 + PfGW456L13_246 0.60 +0.7
291,390 + PfGW456L13_246 0.60 +0.9
291,390 + PfGW456L13_246 0.60 -0.7
291,390 + PfGW456L13_246 0.60 -0.1
291,390 + PfGW456L13_246 0.60 +0.8
291,390 + PfGW456L13_246 0.60 +0.9
291,390 + PfGW456L13_246 0.60 +1.7
291,390 + PfGW456L13_246 0.60 -0.8
291,391 - PfGW456L13_246 0.60 +0.0
291,391 - PfGW456L13_246 0.60 +3.2
291,391 - PfGW456L13_246 0.60 -2.2
291,391 - PfGW456L13_246 0.60 -0.8
291,391 - PfGW456L13_246 0.60 +1.7
291,391 - PfGW456L13_246 0.60 -0.1
291,391 - PfGW456L13_246 0.60 -0.2
291,391 - PfGW456L13_246 0.60 -0.2
291,391 - PfGW456L13_246 0.60 +2.1
291,391 - PfGW456L13_246 0.60 -0.4
291,391 - PfGW456L13_246 0.60 +2.2
291,391 - PfGW456L13_246 0.60 -2.0
291,391 - PfGW456L13_246 0.60 -2.3
291,391 - PfGW456L13_246 0.60 -0.5
291,391 - PfGW456L13_246 0.60 -1.2
291,391 - PfGW456L13_246 0.60 +0.4
291,391 - PfGW456L13_246 0.60 -0.2
291,391 - PfGW456L13_246 0.60 +0.6
291,391 - PfGW456L13_246 0.60 +1.1
291,464 + PfGW456L13_246 0.66 -0.7
291,464 + PfGW456L13_246 0.66 +0.2
291,464 + PfGW456L13_246 0.66 +0.7
291,464 + PfGW456L13_246 0.66 -2.3
291,464 + PfGW456L13_246 0.66 -0.8
291,464 + PfGW456L13_246 0.66 +1.4
291,464 + PfGW456L13_246 0.66 +1.1
291,464 + PfGW456L13_246 0.66 +1.0
291,464 + PfGW456L13_246 0.66 -0.1
291,464 + PfGW456L13_246 0.66 -0.3
291,464 + PfGW456L13_246 0.66 -1.9
291,464 + PfGW456L13_246 0.66 +1.7
291,465 - PfGW456L13_246 0.66 +1.0
291,465 - PfGW456L13_246 0.66 -0.3
291,465 - PfGW456L13_246 0.66 -2.1
291,465 - PfGW456L13_246 0.66 +0.4
291,465 - PfGW456L13_246 0.66 +2.7
291,465 - PfGW456L13_246 0.66 -2.6
291,465 - PfGW456L13_246 0.66 -1.1
291,465 - PfGW456L13_246 0.66 +1.2
291,465 - PfGW456L13_246 0.66 -0.7
291,465 - PfGW456L13_246 0.66 +0.5
291,737 + PfGW456L13_246 0.90 +0.1
291,737 + PfGW456L13_246 0.90 +2.0
291,738 - +1.5
291,769 + +0.2
291,770 - +0.8
291,802 + +0.5
292,099 - PfGW456L13_247 0.21 -2.9
292,810 + PfGW456L13_247 0.78 -0.3
292,899 + PfGW456L13_247 0.85 -2.9
292,899 + PfGW456L13_247 0.85 -1.8
292,900 - PfGW456L13_247 0.85 -0.6
292,900 - PfGW456L13_247 0.85 -2.4
293,090 + -1.4
293,090 + -1.1
293,091 - -1.0
293,091 - +3.1
293,091 - +0.6
293,091 - +0.8
293,091 - +1.5
293,091 - +1.2
293,105 + +2.0
293,105 + +0.7
293,105 + -1.7
293,105 + -1.1
293,106 - +1.4
293,106 - -0.1
293,106 - +0.3
293,106 - +2.2
293,106 - +1.3
293,106 - +1.0
293,106 - +0.2
293,106 - +0.5
293,106 - +2.2
293,106 - -3.1
293,106 - +1.4
293,162 + PfGW456L13_248 0.11 -0.1
293,162 + PfGW456L13_248 0.11 +0.4
293,162 + PfGW456L13_248 0.11 +1.1
293,162 + PfGW456L13_248 0.11 +0.7
293,162 + PfGW456L13_248 0.11 -2.6
293,162 + PfGW456L13_248 0.11 +0.6
293,162 + PfGW456L13_248 0.11 +0.4
293,162 + PfGW456L13_248 0.11 +0.1
293,162 + PfGW456L13_248 0.11 +0.4
293,162 + PfGW456L13_248 0.11 +1.0
293,162 + PfGW456L13_248 0.11 +0.7
293,162 + PfGW456L13_248 0.11 +0.7
293,162 + PfGW456L13_248 0.11 -0.3
293,162 + PfGW456L13_248 0.11 +1.3
293,162 + PfGW456L13_248 0.11 +0.7
293,162 + PfGW456L13_248 0.11 -2.1
293,162 + PfGW456L13_248 0.11 -3.0
293,162 + PfGW456L13_248 0.11 -0.1
293,162 + PfGW456L13_248 0.11 -0.8
293,163 - PfGW456L13_248 0.11 +1.7
293,163 - PfGW456L13_248 0.11 +0.3
293,163 - PfGW456L13_248 0.11 -1.5
293,163 - PfGW456L13_248 0.11 -0.7
293,163 - PfGW456L13_248 0.11 -1.6
293,163 - PfGW456L13_248 0.11 +0.4
293,163 - PfGW456L13_248 0.11 +0.2
293,163 - PfGW456L13_248 0.11 +0.1
293,163 - PfGW456L13_248 0.11 -2.9
293,163 - PfGW456L13_248 0.11 -2.2
293,163 - PfGW456L13_248 0.11 +0.9
293,163 - PfGW456L13_248 0.11 +0.3
293,163 - PfGW456L13_248 0.11 -2.8
293,163 - PfGW456L13_248 0.11 -0.5
293,163 - PfGW456L13_248 0.11 -0.3
293,163 - PfGW456L13_248 0.11 +0.1
293,163 - PfGW456L13_248 0.11 -0.3
293,163 - PfGW456L13_248 0.11 +0.7
293,166 + PfGW456L13_248 0.11 -3.2
293,166 + PfGW456L13_248 0.11 +1.8
293,166 + PfGW456L13_248 0.11 +0.5
293,166 + PfGW456L13_248 0.11 +0.3
293,166 + PfGW456L13_248 0.11 -1.3
293,167 - PfGW456L13_248 0.11 +0.9
293,167 - PfGW456L13_248 0.11 -0.1
293,167 - PfGW456L13_248 0.11 +0.7
293,167 - PfGW456L13_248 0.11 +1.1
293,493 - PfGW456L13_248 0.56 -2.9
293,493 - PfGW456L13_248 0.56 +2.0
293,546 + PfGW456L13_248 0.64 -1.5
293,546 + PfGW456L13_248 0.64 +2.0
293,546 + PfGW456L13_248 0.64 -1.9
293,546 + PfGW456L13_248 0.64 +2.1
293,546 + PfGW456L13_248 0.64 -0.6
293,546 + PfGW456L13_248 0.64 +1.3
293,546 + PfGW456L13_248 0.64 -0.6
293,546 + PfGW456L13_248 0.64 -0.6
293,547 - PfGW456L13_248 0.64 +0.2
293,547 - PfGW456L13_248 0.64 +1.4
293,547 - PfGW456L13_248 0.64 +1.0
293,547 - PfGW456L13_248 0.64 +0.3
293,547 - PfGW456L13_248 0.64 +2.8
293,547 - PfGW456L13_248 0.64 +1.7
293,547 - PfGW456L13_248 0.64 +0.8
293,547 - PfGW456L13_248 0.64 -0.5
293,547 - PfGW456L13_248 0.64 -1.5
293,555 - PfGW456L13_248 0.65 -0.4
293,615 + PfGW456L13_248 0.73 +0.7
293,670 - PfGW456L13_248 0.81 +1.1
293,670 - PfGW456L13_248 0.81 +1.6
293,675 + PfGW456L13_248 0.81 -0.9
293,675 + PfGW456L13_248 0.81 -2.6
293,898 + PfGW456L13_249 0.14 +0.8
293,898 + PfGW456L13_249 0.14 -3.3
293,898 + PfGW456L13_249 0.14 -0.0
293,961 - PfGW456L13_249 0.25 +0.0

Or see this region's nucleotide sequence