Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26135

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,840,137	+		PFLU_RS26130	0.35	-0.1
5,840,138	-		PFLU_RS26130	0.35	+0.6
5,840,138	-		PFLU_RS26130	0.35	-0.2
5,840,138	-		PFLU_RS26130	0.35	+1.1
5,840,214	-		PFLU_RS26130	0.40	-1.3
5,840,214	-		PFLU_RS26130	0.40	+0.5
5,840,281	+		PFLU_RS26130	0.45	-0.8
5,840,281	+		PFLU_RS26130	0.45	-0.1
5,840,281	+		PFLU_RS26130	0.45	-0.7
5,840,282	-		PFLU_RS26130	0.45	+1.3
5,840,286	+		PFLU_RS26130	0.45	-0.3
5,840,286	+		PFLU_RS26130	0.45	-1.5
5,840,286	+		PFLU_RS26130	0.45	+0.1
5,840,287	-		PFLU_RS26130	0.45	+0.7
5,840,287	-		PFLU_RS26130	0.45	-1.4
5,840,287	-		PFLU_RS26130	0.45	+0.7
5,840,287	-		PFLU_RS26130	0.45	+1.8
5,840,417	+		PFLU_RS26130	0.54	-1.2
5,840,417	+		PFLU_RS26130	0.54	+0.1
5,840,418	-		PFLU_RS26130	0.54	+1.1
5,840,429	+		PFLU_RS26130	0.55	+0.5
5,840,429	+		PFLU_RS26130	0.55	-0.4
5,840,429	+		PFLU_RS26130	0.55	-1.7
5,840,429	+		PFLU_RS26130	0.55	-0.3
5,840,429	+		PFLU_RS26130	0.55	-2.1
5,840,430	-		PFLU_RS26130	0.55	+0.4
5,840,430	-		PFLU_RS26130	0.55	+1.2
5,840,430	-		PFLU_RS26130	0.55	+0.2
5,840,432	+		PFLU_RS26130	0.55	-0.3
5,840,432	+		PFLU_RS26130	0.55	-0.2
5,840,432	+		PFLU_RS26130	0.55	-0.4
5,840,432	+		PFLU_RS26130	0.55	+0.9
5,840,432	+		PFLU_RS26130	0.55	+0.8
5,840,432	+		PFLU_RS26130	0.55	-0.8
5,840,432	+		PFLU_RS26130	0.55	-0.4
5,840,432	+		PFLU_RS26130	0.55	+0.8
5,840,432	+		PFLU_RS26130	0.55	-1.0
5,840,432	+		PFLU_RS26130	0.55	+0.2
5,840,433	-		PFLU_RS26130	0.55	-0.4
5,840,433	-		PFLU_RS26130	0.55	+0.7
5,840,433	-		PFLU_RS26130	0.55	+0.9
5,840,433	-		PFLU_RS26130	0.55	-2.5
5,840,433	-		PFLU_RS26130	0.55	-1.5
5,840,435	+		PFLU_RS26130	0.55	-0.0
5,840,435	+		PFLU_RS26130	0.55	+0.6
5,840,435	+		PFLU_RS26130	0.55	+2.0
5,840,435	+		PFLU_RS26130	0.55	-1.4
5,840,435	+		PFLU_RS26130	0.55	-1.4
5,840,435	+		PFLU_RS26130	0.55	+0.3
5,840,435	+		PFLU_RS26130	0.55	+0.3
5,840,435	+		PFLU_RS26130	0.55	+0.6
5,840,435	+		PFLU_RS26130	0.55	-0.1
5,840,435	-		PFLU_RS26130	0.55	-0.7
5,840,436	-		PFLU_RS26130	0.56	+1.8
5,840,436	-		PFLU_RS26130	0.56	+2.3
5,840,436	-		PFLU_RS26130	0.56	-0.1
5,840,436	-		PFLU_RS26130	0.56	+2.0
5,840,436	-		PFLU_RS26130	0.56	-1.2
5,840,436	-		PFLU_RS26130	0.56	+0.2
5,840,436	-		PFLU_RS26130	0.56	-0.7
5,840,436	-		PFLU_RS26130	0.56	+1.1
5,840,436	-		PFLU_RS26130	0.56	+0.7
5,840,436	-		PFLU_RS26130	0.56	-0.8
5,840,436	-		PFLU_RS26130	0.56	+2.9
5,840,436	-		PFLU_RS26130	0.56	-0.9
5,840,483	+		PFLU_RS26130	0.59	+1.3
5,840,507	-		PFLU_RS26130	0.60	+0.4
5,840,604	-		PFLU_RS26130	0.67	-0.4
5,840,604	-		PFLU_RS26130	0.67	+0.6
5,840,604	-		PFLU_RS26130	0.67	-0.7
5,840,604	-		PFLU_RS26130	0.67	+0.9
5,840,604	-		PFLU_RS26130	0.67	+0.9
5,840,648	+		PFLU_RS26130	0.70	-0.1
5,840,649	-		PFLU_RS26130	0.70	-0.8
5,840,658	+		PFLU_RS26130	0.71	+1.7
5,840,750	+		PFLU_RS26130	0.77	-0.1
5,840,751	-		PFLU_RS26130	0.77	-2.1
5,840,751	-		PFLU_RS26130	0.77	+2.9
5,840,751	-		PFLU_RS26130	0.77	+0.3
5,840,803	+		PFLU_RS26130	0.81	-1.7
5,840,803	+		PFLU_RS26130	0.81	-0.3
5,840,803	+		PFLU_RS26130	0.81	+1.4
5,840,803	+		PFLU_RS26130	0.81	+0.3
5,840,804	-		PFLU_RS26130	0.81	-0.8
5,840,804	-		PFLU_RS26130	0.81	+0.9
5,840,804	-		PFLU_RS26130	0.81	+0.6
5,840,806	-		PFLU_RS26130	0.81	-2.3
5,840,808	-		PFLU_RS26130	0.81	+1.1
5,840,912	+		PFLU_RS26130	0.89	+0.4
5,840,913	-		PFLU_RS26130	0.89	-0.8
5,840,913	-		PFLU_RS26130	0.89	+2.4
5,840,913	-		PFLU_RS26130	0.89	+0.5
5,840,913	-		PFLU_RS26130	0.89	+1.1
5,840,913	-		PFLU_RS26130	0.89	+1.1
5,840,951	+				+0.2
5,840,951	+				-3.2
5,840,951	+				-0.4
5,840,951	+				+0.6
5,840,951	+				+1.4
5,840,951	+				-0.7
5,840,952	-				-0.8
5,840,952	-				+0.6
5,840,952	-				+1.6
5,840,952	-				+0.3
5,840,952	-				-1.0
5,840,952	-				-0.3
5,840,952	-				-1.1
5,840,993	-				+0.1
5,840,993	-				+0.1
5,841,053	+				+0.4
5,841,053	+				-2.1
5,841,053	+				+1.1
5,841,054	-				+0.9
5,841,054	-				-1.5
5,841,054	-				+0.1
5,841,054	-				-0.6
5,841,054	-				-0.5
5,841,054	-				-2.3
5,841,056	+				-0.7
5,841,056	+				-1.3
5,841,056	+				-1.8
5,841,056	+				+0.1
5,841,056	+				-0.6
5,841,057	-				+0.7
5,841,057	-				-2.4
5,841,057	-				+0.6
5,841,057	-				-1.4
5,841,057	-				-0.7
5,841,057	-				-1.0
5,841,057	-				+1.0
5,841,071	+				+0.4
5,841,071	+				+0.4
5,841,072	-				-0.4
5,841,072	-				-1.1
5,841,154	+		PFLU_RS26135	0.13	+0.6
5,841,155	-		PFLU_RS26135	0.13	-2.5
5,841,155	-		PFLU_RS26135	0.13	-0.4
5,841,155	-		PFLU_RS26135	0.13	+0.1
5,841,162	+		PFLU_RS26135	0.15	-1.9
5,841,162	+		PFLU_RS26135	0.15	-0.2
5,841,162	+		PFLU_RS26135	0.15	+0.8
5,841,162	+		PFLU_RS26135	0.15	-1.8
5,841,162	+		PFLU_RS26135	0.15	+0.3
5,841,163	-		PFLU_RS26135	0.15	-0.4
5,841,163	-		PFLU_RS26135	0.15	-0.0
5,841,163	-		PFLU_RS26135	0.15	-0.2
5,841,163	-		PFLU_RS26135	0.15	-2.3
5,841,163	-		PFLU_RS26135	0.15	+0.4
5,841,519	+		PFLU_RS26135	0.88	-2.3
5,841,519	+		PFLU_RS26135	0.88	+1.7
5,841,519	+		PFLU_RS26135	0.88	+0.9
5,841,549	+				+0.9
5,841,549	+				+1.7
5,841,549	+				+0.5
5,841,549	+				-2.8
5,841,549	+				+3.1
5,841,549	+				+0.5
5,841,549	+				-0.1
5,841,549	+				-0.9
5,841,549	+				+1.5
5,841,549	+				+0.3
5,841,549	+				-2.1
5,841,549	+				-0.0
5,841,549	+				-2.1
5,841,549	+				+1.1
5,841,549	+				-2.9
5,841,549	+				+1.0
5,841,549	+				+0.8
5,841,549	+				-1.2
5,841,549	+				+0.2
5,841,549	+				-0.3
5,841,549	+				+1.7
5,841,549	+				-0.8
5,841,549	+				+1.1
5,841,550	-				+1.3
5,841,550	-				-0.1
5,841,550	-				+1.6
5,841,550	-				+0.7
5,841,550	-				+1.2
5,841,550	-				+0.5
5,841,550	-				+0.1
5,841,550	-				+0.4
5,841,550	-				+1.1
5,841,550	-				-0.9
5,841,550	-				+0.7
5,841,550	-				+0.7
5,841,550	-				+0.2
5,841,550	-				+1.1
5,841,553	+				+1.3
5,841,553	+				+0.2
5,841,553	+				+0.5
5,841,553	+				-0.5
5,841,553	+				-2.8
5,841,553	+				-1.4
5,841,554	-				-1.8
5,841,554	-				+0.5
5,841,554	-				+0.6
5,841,554	-				-1.3
5,841,554	-				+0.1
5,841,554	-				-0.6
5,841,554	-				+0.6
5,841,614	+				+0.2
5,841,614	+				-1.4
5,841,614	+				+0.7
5,841,615	-				+0.0
5,841,616	+				+1.1
5,841,616	+				-2.9
5,841,617	-				+0.7
5,841,617	-				-0.2
5,841,672	+				+0.0
5,841,672	+				+0.2
5,841,689	+				+0.6
5,841,690	-				+0.2
5,841,704	+				+1.4
5,841,937	+		PFLU_RS26140	0.11	+0.3
5,842,020	+		PFLU_RS26140	0.15	-0.3
5,842,050	+		PFLU_RS26140	0.17	-0.4
5,842,050	+		PFLU_RS26140	0.17	+0.2
5,842,050	+		PFLU_RS26140	0.17	-1.1
5,842,050	+		PFLU_RS26140	0.17	-0.2
5,842,050	+		PFLU_RS26140	0.17	-0.9
5,842,050	+		PFLU_RS26140	0.17	+0.0
5,842,050	+		PFLU_RS26140	0.17	+1.4
5,842,050	+		PFLU_RS26140	0.17	-0.6
5,842,051	-		PFLU_RS26140	0.17	+1.0
5,842,051	-		PFLU_RS26140	0.17	+0.6
5,842,051	-		PFLU_RS26140	0.17	+1.0
5,842,051	-		PFLU_RS26140	0.17	+1.0
5,842,051	-		PFLU_RS26140	0.17	-1.1
5,842,051	-		PFLU_RS26140	0.17	+1.5
5,842,051	-		PFLU_RS26140	0.17	-1.0
5,842,051	-		PFLU_RS26140	0.17	+1.2
5,842,051	-		PFLU_RS26140	0.17	+0.1
5,842,095	+		PFLU_RS26140	0.19	+0.5
5,842,095	+		PFLU_RS26140	0.19	+0.8
5,842,095	+		PFLU_RS26140	0.19	+0.9
5,842,095	+		PFLU_RS26140	0.19	-0.6
5,842,095	+		PFLU_RS26140	0.19	+0.5
5,842,096	-		PFLU_RS26140	0.19	-2.0
5,842,096	-		PFLU_RS26140	0.19	-1.3
5,842,136	+		PFLU_RS26140	0.22	+0.6
5,842,136	+		PFLU_RS26140	0.22	-1.8
5,842,136	+		PFLU_RS26140	0.22	+0.5
5,842,136	+		PFLU_RS26140	0.22	-0.7
5,842,136	+		PFLU_RS26140	0.22	-1.4
5,842,136	+		PFLU_RS26140	0.22	-0.0
5,842,137	-		PFLU_RS26140	0.22	+1.1
5,842,137	-		PFLU_RS26140	0.22	+0.5
5,842,137	-		PFLU_RS26140	0.22	+0.7
5,842,137	-		PFLU_RS26140	0.22	+0.1
5,842,137	-		PFLU_RS26140	0.22	-0.5
5,842,137	-		PFLU_RS26140	0.22	-0.9
5,842,303	-		PFLU_RS26140	0.31	+0.5
5,842,360	+		PFLU_RS26140	0.34	-1.0
5,842,360	+		PFLU_RS26140	0.34	+0.8
5,842,360	+		PFLU_RS26140	0.34	+1.5
5,842,360	+		PFLU_RS26140	0.34	+1.3
5,842,361	-		PFLU_RS26140	0.34	-0.3
5,842,361	-		PFLU_RS26140	0.34	-1.0
5,842,440	-		PFLU_RS26140	0.38	+0.1
5,842,451	+		PFLU_RS26140	0.39	-0.1
5,842,452	-		PFLU_RS26140	0.39	+0.6
5,842,452	-		PFLU_RS26140	0.39	+0.5
5,842,561	+		PFLU_RS26140	0.45	+0.7
5,842,562	-		PFLU_RS26140	0.45	-0.1