Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS23645

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,301,102	+				+0.2
5,301,102	+				+0.2
5,301,102	+				-0.1
5,301,102	+				+0.3
5,301,102	+				-0.5
5,301,103	-				-1.1
5,301,103	-				-1.4
5,301,103	-				+0.9
5,301,103	-				-1.1
5,301,103	-				-1.2
5,301,120	-				+0.6
5,301,350	-		PFLU_RS23640	0.25	+1.1
5,301,563	+		PFLU_RS23640	0.50	+1.0
5,301,564	-		PFLU_RS23640	0.50	+0.1
5,301,638	+		PFLU_RS23640	0.58	-0.5
5,301,638	+		PFLU_RS23640	0.58	+1.0
5,301,638	+		PFLU_RS23640	0.58	+0.8
5,301,638	+		PFLU_RS23640	0.58	+0.5
5,301,638	+		PFLU_RS23640	0.58	+1.5
5,301,638	+		PFLU_RS23640	0.58	+1.9
5,301,639	-		PFLU_RS23640	0.58	-0.7
5,301,639	-		PFLU_RS23640	0.58	+0.4
5,301,639	-		PFLU_RS23640	0.58	+0.4
5,301,639	-		PFLU_RS23640	0.58	+0.4
5,301,639	-		PFLU_RS23640	0.58	-2.3
5,301,639	-		PFLU_RS23640	0.58	+1.1
5,301,668	+		PFLU_RS23640	0.62	-0.6
5,301,668	+		PFLU_RS23640	0.62	+1.0
5,301,668	+		PFLU_RS23640	0.62	+0.3
5,301,668	+		PFLU_RS23640	0.62	+0.5
5,301,668	+		PFLU_RS23640	0.62	+0.2
5,301,668	+		PFLU_RS23640	0.62	+0.4
5,301,669	-		PFLU_RS23640	0.62	+0.3
5,301,669	-		PFLU_RS23640	0.62	-0.2
5,301,669	-		PFLU_RS23640	0.62	+0.7
5,301,669	-		PFLU_RS23640	0.62	+0.3
5,301,669	-		PFLU_RS23640	0.62	+1.4
5,301,722	-		PFLU_RS23640	0.68	-1.0
5,302,007	-				+1.4
5,302,016	+				-0.0
5,302,043	+				+1.5
5,302,043	+				+0.1
5,302,043	+				-0.1
5,302,043	+				+0.1
5,302,106	+				+1.0
5,302,106	+				-2.1
5,302,106	+				+0.6
5,302,106	+				-0.2
5,302,107	-				-0.1
5,302,107	-				-1.3
5,302,107	-				+0.5
5,302,248	-		PFLU_RS23645	0.25	-2.1
5,302,310	+		PFLU_RS23645	0.35	+0.5
5,302,310	+		PFLU_RS23645	0.35	-0.8
5,302,310	+		PFLU_RS23645	0.35	-0.4
5,302,310	+		PFLU_RS23645	0.35	+0.5
5,302,310	+		PFLU_RS23645	0.35	+0.4
5,302,310	+		PFLU_RS23645	0.35	+0.0
5,302,311	-		PFLU_RS23645	0.35	-0.3
5,302,311	-		PFLU_RS23645	0.35	-1.3
5,302,311	-		PFLU_RS23645	0.35	-0.5
5,302,529	+		PFLU_RS23645	0.72	+0.4
5,302,529	+		PFLU_RS23645	0.72	+0.9
5,302,530	-		PFLU_RS23645	0.72	+0.1
5,302,565	+		PFLU_RS23645	0.78	+0.0
5,302,604	-		PFLU_RS23645	0.84	-0.3
5,302,702	+				+0.4
5,302,702	+				-0.1
5,302,703	-				-3.1
5,302,792	+				+1.3
5,302,792	+				-0.7
5,302,793	-				-0.5
5,302,797	+				+0.5
5,302,798	-				+0.2
5,302,947	+				+1.4
5,302,947	+				-0.7
5,302,948	-				-0.6
5,302,986	+				+0.0
5,302,986	+				+0.3
5,302,986	+				-0.9
5,302,986	+				-1.5
5,302,986	+				-0.3
5,302,986	+				+0.8
5,302,986	+				+0.6
5,302,986	+				+1.1
5,302,986	+				-0.0
5,302,986	+				+0.5
5,302,986	+				+0.2
5,302,986	+				-2.2
5,302,986	+				+1.0
5,302,986	+				+2.9
5,302,986	+				-0.2
5,302,986	+				+0.6
5,302,986	+				+1.2
5,302,986	+				+0.8
5,302,987	-				+0.9
5,302,987	-				+0.7
5,302,987	-				-2.8
5,302,987	-				-0.1
5,302,987	-				-0.6
5,302,987	-				+0.6
5,302,987	-				-2.9
5,302,987	-				+0.4
5,302,987	-				-1.1
5,302,987	-				-1.5
5,302,987	-				+0.9
5,302,987	-				+0.2
5,302,987	-				+1.4
5,302,987	-				+0.1
5,302,987	-				+0.5
5,302,987	-				-2.1
5,302,987	-				-0.1
5,302,987	-				+0.4
5,302,987	-				-0.1
5,302,987	-				-0.8
5,302,987	-				-0.9
5,302,987	-				+1.0
5,302,987	-				+0.2
5,302,987	-				+0.6
5,302,987	-				+0.4
5,302,987	-				-0.0
5,302,996	+				+1.6
5,302,996	+				-0.3
5,302,996	+				+1.2
5,302,997	-				-0.5
5,302,998	+				+2.0
5,302,998	+				-0.3
5,302,998	+				+1.6
5,302,998	+				-1.6
5,302,998	+				+0.4
5,302,998	+				-0.2
5,302,998	+				-1.4
5,302,998	+				-1.5
5,302,998	+				-0.1
5,302,998	+				-1.6
5,302,998	+				+0.5
5,302,998	+				-0.4
5,302,998	+				-0.5
5,302,999	-				+0.2
5,302,999	-				+0.7
5,302,999	-				-0.6
5,302,999	-				+0.3
5,302,999	-				+0.5
5,302,999	-				-0.8
5,302,999	-				+1.0
5,302,999	-				+0.5
5,302,999	-				-0.6
5,303,005	+				+0.5
5,303,005	+				-0.9
5,303,005	+				-0.3
5,303,005	+				-2.1
5,303,005	+				+0.3
5,303,005	+				-0.7
5,303,005	+				+0.8
5,303,006	-				+0.6
5,303,006	-				+0.2
5,303,006	-				+0.5
5,303,006	-				-1.0
5,303,006	-				+0.4
5,303,026	+				-0.6
5,303,026	+				-1.3
5,303,026	+				-0.5
5,303,026	+				+0.0
5,303,026	+				+0.8
5,303,026	+				-0.9
5,303,026	+				-1.8
5,303,027	-				-1.3
5,303,027	-				-0.3
5,303,027	-				+0.3
5,303,027	-				+0.4
5,303,027	-				-0.3
5,303,027	-				+0.3
5,303,028	+				+0.8
5,303,028	+				-0.5
5,303,028	+				-1.4
5,303,028	+				+0.8
5,303,029	-				+1.5
5,303,029	-				+0.1
5,303,029	-				-0.2
5,303,029	-				-2.0
5,303,029	-				-0.8
5,303,324	+		PFLU_RS23650	0.59	+0.3
5,303,324	+		PFLU_RS23650	0.59	-0.1
5,303,324	+		PFLU_RS23650	0.59	-0.0
5,303,324	+		PFLU_RS23650	0.59	-0.8
5,303,324	+		PFLU_RS23650	0.59	+0.7
5,303,325	-		PFLU_RS23650	0.60	+0.6
5,303,325	-		PFLU_RS23650	0.60	-1.2
5,303,325	-		PFLU_RS23650	0.60	-0.7
5,303,325	-		PFLU_RS23650	0.60	+0.2
5,303,325	-		PFLU_RS23650	0.60	+0.4
5,303,325	-		PFLU_RS23650	0.60	+0.9
5,303,325	-		PFLU_RS23650	0.60	-0.8
5,303,364	+		PFLU_RS23650	0.68	-1.0
5,303,364	+		PFLU_RS23650	0.68	+0.9
5,303,364	+		PFLU_RS23650	0.68	+0.2
5,303,364	+		PFLU_RS23650	0.68	-0.2
5,303,364	+		PFLU_RS23650	0.68	+0.5
5,303,364	+		PFLU_RS23650	0.68	-0.8
5,303,364	+		PFLU_RS23650	0.68	+1.5
5,303,364	+		PFLU_RS23650	0.68	+1.0
5,303,364	+		PFLU_RS23650	0.68	-1.3
5,303,364	+		PFLU_RS23650	0.68	+0.9
5,303,365	-		PFLU_RS23650	0.69	-0.1
5,303,365	-		PFLU_RS23650	0.69	-0.9
5,303,365	-		PFLU_RS23650	0.69	-0.2
5,303,365	-		PFLU_RS23650	0.69	+0.7
5,303,365	-		PFLU_RS23650	0.69	-0.1
5,303,365	-		PFLU_RS23650	0.69	+0.3
5,303,430	+		PFLU_RS23650	0.84	-0.1
5,303,430	+		PFLU_RS23650	0.84	-0.4
5,303,431	-		PFLU_RS23650	0.84	+1.2
5,303,464	+				-1.0
5,303,464	+				+1.7
5,303,464	+				-1.8
5,303,464	+				-0.1
5,303,464	+				+0.6
5,303,464	+				-1.5
5,303,465	-				-0.0
5,303,465	-				+1.4
5,303,465	-				+0.7
5,303,465	-				+0.5
5,303,465	-				+0.1
5,303,465	-				-2.5
5,303,465	-				-1.8
5,303,465	-				+0.9
5,303,510	+				+0.5
5,303,510	+				+0.6
5,303,510	+				+0.2
5,303,510	+				+0.5
5,303,511	-				+0.0
5,303,524	+				-0.9
5,303,524	+				+0.7
5,303,549	+				+0.6
5,303,549	+				+0.4
5,303,550	-				-0.3
5,303,550	-				+1.7